EY744764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744764 vs. ExPASy Swiss-Prot
Match: ROC3_ARATH (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 1.176e-64 Identity = 118/141 (83.69%), Postives = 134/141 (95.04%), Query Frame = 3 Query: 60 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 482 +AKLFVGNL YDV+S+ LAMLFE+AGTVEIAEVIYNRETD+SRGFGFVTMS+V+EAE AVE F+RYD++GRLLTVNKAAPRG++PERAPRV+EP FR+YVGNLPW+VDN RLEQ+FSEHGKVV ARVVYDRETGRSRGFGF Sbjct: 149 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGF 289 HSP 2 Score: 81.6481 bits (200), Expect = 8.545e-15 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 66 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 302 +++VGNLP+DVD+ +L LF + G V A V+Y+RET RSRGFGFVTMS V+E +A+ +++GR + VN A R Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEER 323
BLAST of EY744764 vs. ExPASy Swiss-Prot
Match: ROC3_NICSY (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.620e-64 Identity = 115/141 (81.56%), Postives = 135/141 (95.74%), Query Frame = 3 Query: 60 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 482 DAKLFVGNLPYD+DSE LA LF++AG VEIAEVIYNRETDRSRGFGFVTMSTVEEA+KAVE++ +YD++GRLLTVNKAAPRG++PERAPR F+P +RIYVGN+PW++D+ARLEQVFSEHGKVV+ARVV+DRE+GRSRGFGF Sbjct: 96 DAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGF 236 HSP 2 Score: 74.7146 bits (182), Expect = 1.045e-12 Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 66 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 302 +++VGN+P+D+D +L +F + G V A V+++RE+ RSRGFGFVTMS+ E +A+ +DGR + VN A R Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEER 270
BLAST of EY744764 vs. ExPASy Swiss-Prot
Match: ROC4_NICSY (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 2.896e-63 Identity = 117/141 (82.98%), Postives = 131/141 (92.91%), Query Frame = 3 Query: 60 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 482 DAKLFVGNLPYDVDSE LA LFE+AG VEIAEVIYNR+TD+SRGFGFVTMSTVEEAEKAVEM++RYD++GRLLTVNKAA RG +PER PR FE +RIYVGN+PW +D+ARLEQ+FSEHGKVV+ARVVYDRETGRSRGFGF Sbjct: 135 DAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGF 275 HSP 2 Score: 74.3294 bits (181), Expect = 1.364e-12 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 66 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 302 +++VGN+P+ +D +L LF + G V A V+Y+RET RSRGFGFVTM++ E A+ +DGR + VN A R Sbjct: 231 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDR 309
BLAST of EY744764 vs. ExPASy Swiss-Prot
Match: ROC1_SPIOL (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 1.139e-59 Identity = 117/142 (82.39%), Postives = 129/142 (90.85%), Query Frame = 3 Query: 60 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR-VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 482 +AKLFVGNLPYDVDSEKLA +F+ AG VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE+ + YD+DGR LTVNKAAPRG+ PERAPR FEP R+YVGNLPW+VD +RLEQ+FSEHGKVV+ARVV DRETGRSRGFGF Sbjct: 54 EAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGS-PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGF 194 HSP 2 Score: 77.411 bits (189), Expect = 1.612e-13 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 3 Query: 66 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 323 +++VGNLP+DVD+ +L LF + G V A V+ +RET RSRGFGFVTMS+ E A+ +DGR + VN A R P RA Sbjct: 150 RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEER---PRRA 232
BLAST of EY744764 vs. ExPASy Swiss-Prot
Match: ROC1_NICSY (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 4.212e-38 Identity = 82/148 (55.41%), Postives = 101/148 (68.24%), Query Frame = 3 Query: 60 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP-------ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 482 D K+FVGNLP+ DS LA LFE+AG VE+ EVIY++ T RSRGFGFVTMS+ EE E A + F+ Y++DGR L VN P + R F+ R+YVGNL W VD LE +FSE GKVV+A+VVYDR++GRSRGFGF Sbjct: 86 DLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGF 233 HSP 2 Score: 73.559 bits (179), Expect = 2.327e-12 Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 66 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 302 +++VGNL + VD + L LF + G V A+V+Y+R++ RSRGFGFVT S+ EE A+E D++GR + V+ A R Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEAR 267
BLAST of EY744764 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 7.184e-38 Identity = 85/160 (53.12%), Postives = 105/160 (65.62%), Query Frame = 3 Query: 60 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---RAPRV----------------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 482 D KLFVGNLP++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMS+V E E A + F+ Y++DGR L VN P + + R PR G R+YVGNL W VD+ LE +FSE GKVV ARV+YDR++GRS+GFGF Sbjct: 90 DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGF 249 HSP 2 Score: 68.5514 bits (166), Expect = 7.486e-11 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 3 Query: 66 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 302 +++VGNL + VD L LF + G V A VIY+R++ RS+GFGFVT + +E + A++ D+DGR + V++A R Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEAR 283
BLAST of EY744764 vs. ExPASy Swiss-Prot
Match: ROC1_NICPL (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 3.018e-36 Identity = 81/154 (52.60%), Postives = 100/154 (64.94%), Query Frame = 3 Query: 60 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP-------------ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 482 D K+FVGNL + DS LA LFE+AG VE+ EVIY++ T RSRGFGFVTMS+ EE E A + F+ Y++DGR L VN P + R F+ R+YVGNL W VD LE +FSE GKVV+A+VVYDR++GRSRGFGF Sbjct: 86 DLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGF 239 HSP 2 Score: 73.559 bits (179), Expect = 2.327e-12 Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 66 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 302 +++VGNL + VD + L LF + G V A+V+Y+R++ RSRGFGFVT S+ EE A+E D++GR + V+ A R Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEAR 273
BLAST of EY744764 vs. ExPASy Swiss-Prot
Match: ROC2_NICSY (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 3.942e-36 Identity = 85/168 (50.60%), Postives = 105/168 (62.50%), Query Frame = 3 Query: 60 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---------------------------RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 482 D KLFVGNLP+ VDS LA LFE+AG VE+ EVIY++ T RSRGFGFVTMST EE E A + F+ Y+IDGR + VN A P + E R R + R+YVGNL W VD+ L+++FSE G VV+A+VVYDR++GRSRGFGF Sbjct: 86 DLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGF 252 HSP 2 Score: 70.0922 bits (170), Expect = 2.573e-11 Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 66 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 302 +++VGNL + VD L LF + G V A+V+Y+R++ RSRGFGFVT S+ +E A++ + D+DGR + V+ A R Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER 286
BLAST of EY744764 vs. ExPASy Swiss-Prot
Match: ROC2_NICPL (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 5.148e-36 Identity = 85/168 (50.60%), Postives = 105/168 (62.50%), Query Frame = 3 Query: 60 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---------------------------RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 482 D KLFVGNLP+ VDS LA LFE+AG VEI EVIY++ + RSRGFGFVTMST EE E A + F+ Y+IDGR + VN A P + E R R + R+YVGNL W VD+ L+++FSE G VV+A+VVYDR++GRSRGFGF Sbjct: 87 DLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGF 253 HSP 2 Score: 70.8626 bits (172), Expect = 1.508e-11 Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 66 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 302 +++VGNL + VD L LF + G V A+V+Y+R++ RSRGFGFVT S+ +E A++ + D+DGR + V+ A R Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287
BLAST of EY744764 vs. ExPASy Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.271e-26 Identity = 64/148 (43.24%), Postives = 94/148 (63.51%), Query Frame = 3 Query: 66 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPE---RAPRVFEPGF-----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 482 +L+VGNLP+ + S +L+ +F +AGTV E++Y+R TDRSRGF FVTM +VEEA++A+ +F + GR + VN PRG + E R GF ++YV NL W + + L F++ ++A+V+YDR +GRSRGFGF Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGF 262 The following BLAST results are available for this feature:
BLAST of EY744764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744764 ID=EY744764; Name=EY744764; organism=Citrus sinensis; type=EST; length=1083bpback to top |