EY679771

Overview
NameEY679771
Unique NameEY679771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679771 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.985e-18
Identity = 59/181 (32.60%), Postives = 93/181 (51.38%), Query Frame = 3
Query:   24 VTLIIGLMLAVLIRESNAEE--------QQRLDAAESIKTVCSVTQNPDSCFXXXXXXXXXXXXXXKPDPEVILKLSLQVNVNHFSNITSSIKSLYGN--HLEVALRDCVDQLRDASSRLNDSMSELNATL----TDRTVNDIQTWISAAMTDEETCLDGLEEMGSTVA----DEVKTMMK 512
            + +II  +  V+I   N+E         Q  L  A S+K VC  T+ P SCF                DPE++ KLSL+V ++  S+  S +++       L+ A+  C     DA  RLNDS+S L        +  +V++++TW+SAA+TD++TCLD + E+ ST A     E++T M+
Sbjct:   40 IAVIIAAVAGVVIHNRNSESSPSSDSVPQTELSPAASLKAVCDTTRYPSSCFSSISSLPESNTT----DPELLFKLSLRVAIDELSSFPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSASVSNVETWLSAALTDQDTCLDAVGELNSTAARGALQEIETAMR 216          
BLAST of EY679771 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.220e-17
Identity = 57/185 (30.81%), Postives = 92/185 (49.73%), Query Frame = 3
Query:   24 VTLIIGLMLAVLIR----ESNAEEQQRLDAAESIKTVCSVTQNPDSCFXXXXXXXXXXXXXXKPDPEVILKLSLQVNVNHFSNITSSIKSLY----GNHLEVALRDCVDQLRDASSRLNDSMS-----ELNATLTDRTVNDIQTWISAAMTDEETCLDGLEEM--------GSTVADEVKTMMKK 515
            + +II  ++A ++     ES       L  + S+K +CSVT+ P+SC                 DPE + KLSL+V ++   +I+   + L        ++ ALR C D + DA  RLND++S     E   TL+   + D++TW+SA +TD ETC D L+E+         ST+   +K+ M +
Sbjct:   40 IAVIIAAVVATVVHKNKNESTPSPPPELTPSTSLKAICSVTRFPESCISSISKLPSSNTT----DPETLFKLSLKVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSR 220          
BLAST of EY679771 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.560e-14
Identity = 49/138 (35.51%), Postives = 72/138 (52.17%), Query Frame = 3
Query:   90 RLDAAESIKTVCSVTQNPDSCFXXXXXXXXXXXXXXKPDPEVILKLSLQVNVNHFSNITSSIKSLY----GNHLEVALRDCVDQLRDASSRLNDSMSELNAT------LTDRTVNDIQTWISAAMTDEETCLDGLEEM 473
            +L  A S++ VCSVT+ P SC                 DPE + +LSLQV +N  ++I    K L        L+ +L  C D   DA   +ND++S +         L   T+++IQTW+SAA+TD +TCLD L+E+
Sbjct:  264 KLTPAASLRNVCSVTRYPASCVSSISKLPSSNTT----DPEALFRLSLQVVINELNSIAGLPKKLAEETDDERLKSSLSVCGDVFNDAIDIVNDTISTMEEVGDGKKILKSSTIDEIQTWLSAAVTDHDTCLDALDEL 397          

HSP 2 Score: 75.485 bits (184), Expect = 4.829e-13
Identity = 52/139 (37.41%), Postives = 71/139 (51.08%), Query Frame = 3
Query:   93 LDAAESIKTVCSVTQNPDSCFXXXXXXXXXXXXXXKPDPEVILKLSLQVNVNHFSNITSSIKSLY----GNHLEVALRDCVDQLRDASSRLNDSMSELNAT-----LTDRTVNDIQTWISAAMTDEETCLDGLEEMGST 482
            L  A S+KTVCSVT  P SCF                DPEVI +LSLQV ++  ++I    K L        L+ AL  C   L  A  R+N+++S +        L   T++D+ TW+SAA+T   TCLD L+E+  T
Sbjct:   71 LTPAASLKTVCSVTNYPVSCFSSISKLPLSNTT----DPEVIFRLSLQVVIDELNSIVELPKKLAEETDDEGLKSALSVCEHLLDLAIDRVNETVSAMEVVDGKKILNAATIDDLLTWLSAAVTYHGTCLDALDEISHT 205          
The following BLAST results are available for this feature:
BLAST of EY679771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PME3_PHAVU4.985e-1832.60Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME1_ARATH4.220e-1730.81Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME26_ARATH2.560e-1435.51Putative pectinesterase/pectinesterase inhibitor 2... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-G12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679771 ID=EY679771; Name=EY679771; organism=Citrus sinensis; type=EST; length=923bp
CGGACGCGTGGGCGGACGCGTGGGTGACCTTGATCATTGGTCTGATGCTT
GCAGTTCTCATTCGGGAGTCAAACGCGGAAGAACAACAGCGACTGGACGC
TGCCGAGTCGATCAAAACGGTGTGCAGCGTTACCCAGAACCCGGATTCAT
GCTTCACCGCCTTATCTTCTTCTCTCAACATCTCATCGACAACGACAAAA
CCAGACCCAGAAGTGATCTTGAAGCTCTCTCTGCAAGTCAACGTCAATCA
CTTCTCAAACATCACTTCTTCGATTAAAAGTCTTTACGGTAATCACCTTG
AGGTTGCTTTACGCGACTGCGTGGATCAGCTGCGGGACGCGTCGAGTCGA
CTCAACGACTCCATGTCTGAGTTGAACGCCACGTTGACTGACAGGACTGT
CAACGACATCCAGACGTGGATCAGCGCGGCCATGACGGACGAAGAAACTT
GCTTGGACGGATTGGAGGAGATGGGATCAACGGTGGCTGATGAAGTCAAG
ACCATGATGAAAAAAGTCAAAGGAATTACTCAGTTACAGCCTGGCTATTA
TTGCTAACATCCGAACACTTCTTCAGAAATTTGGCCTCCATATGCATTTG
ATTGAAATTGAACGCCTCAAAAAAAATCCTCCCGATTTTTAAAATATTTC
CTTTGGCGGTGGGGCACCATCGAAAACCCTGTCAATCACTTGGGAATTCC
GAAAAAGTTCGTTACCCCCCTTTGTTTTTATCCCTTGGGGCCCAACTTAT
TGGCAATTAAACTATGCCCAACCCCGGGTTATTCCAATAAATAAAGGCAC
TTGGTTCCTCAACAAAAATAAAGAAGAGGGGGGAAGGCCTCGCATGAGGA
TACCAAGATAGGGTCAGGGGGGGCGGGTAGAAGCCACGACCTCTTACAAG
GATGTAACAATTTATCATGCATC
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