EY744762

Overview
NameEY744762
Unique NameEY744762
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744762 vs. ExPASy Swiss-Prot
Match: CND2_MOUSE (Condensin complex subunit 2 OS=Mus musculus GN=Ncaph PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.149e-15
Identity = 47/81 (58.02%), Postives = 58/81 (71.60%), Query Frame = 3 
Query:  378 QIVELLQNCIKLASENKINQNNTWELKLIDHLSEIIKVETVGDAE-TNFQKASCTLEAGVKIYSVRVDAVHAQAYKVLGGI 617
            QI E    CIKL+SENKI   N + L LID +SEI+K +   DAE TNF+ A+ TL+A  KIY+VRVDAVHA  Y+VLGG+
Sbjct:  101 QITEHYSTCIKLSSENKITTKNAFGLHLIDFMSEILKQK---DAEPTNFKVAAGTLDASTKIYAVRVDAVHADVYRVLGGL 178
[Close]
BLAST of EY744762 vs. ExPASy Swiss-Prot
Match: CND2_XENLA (Condensin complex subunit 2 OS=Xenopus laevis GN=ncaph PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.559e-15
Identity = 49/102 (48.04%), Postives = 66/102 (64.71%), Query Frame = 3 
Query:  360 PCLSEEQIVELLQNCIKLASENKINQNNTWELKLIDHLSEIIKVETVGDAE-TNFQKASCTLEAGVKIYSVRVDAVHAQAYKVLGGITPAGQ-KED*KNHHS 659
            P L+  QI +    CIKL+ ENKI   N + L LID++ +I+K +   D+E TNF+ A+ TL+A  KIY+VRVDAVHA  YKVLGG+    Q  ED +N  +
Sbjct:   90 PKLNNTQISDHYSTCIKLSQENKITTKNAFGLHLIDYMGDILKHK---DSELTNFKVAAGTLDASAKIYAVRVDAVHADVYKVLGGLGKESQATEDTENQET 188
[Close]
BLAST of EY744762 vs. ExPASy Swiss-Prot
Match: CND2_HUMAN (Condensin complex subunit 2 OS=Homo sapiens GN=NCAPH PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 2.559e-15
Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = 3 
Query:  360 PCLSEEQIVELLQNCIKLASENKINQNNTWELKLIDHLSEIIKVETVGDAE-TNFQKASCTLEAGVKIYSVRVDAVHAQAYKVLGGI 617
            P  +  QI E    CIKL++ENKI   N + L LID +SEI+K +   D E TNF+ A+ TL+A  KIY+VRVDAVHA  Y+VLGG+
Sbjct:  100 PKFTNTQITEHYSTCIKLSTENKITTKNAFGLHLIDFMSEILKQK---DTEPTNFKVAAGTLDASTKIYAVRVDAVHADVYRVLGGL 183
The following BLAST results are available for this feature:
BLAST of EY744762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CND2_MOUSE1.149e-1558.02Condensin complex subunit 2 OS=Mus musculus GN=Nca... [more]
CND2_XENLA2.559e-1548.04Condensin complex subunit 2 OS=Xenopus laevis GN=n... [more]
CND2_HUMAN2.559e-1552.87Condensin complex subunit 2 OS=Homo sapiens GN=NCA... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-C05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744762 ID=EY744762; Name=EY744762; organism=Citrus sinensis; type=EST; length=983bp
CCACGCGTCCGGTTCCGATGTTACAGTAGAAAACCAAACACGCCCTTAGT
ACAACTTACGCTTGTTGTTCAACTCCCAAACACGCCTTAGCGCACTTTTC
TTTCGACGTACGCTACGGTTGTTTAACTCCTTCCATTTTCAAATTTTTAT
TTTTCTTTGTCCTTAAAATGTCGGAGGCGTTGAGCCCGAGACAAAGGGGC
ACGATGTCGAACCGACTCCATTCTCCAACAAGGCAAAGGCAATTCTTCTT
AGGCTCCAACAACGACCAACTCGAGCGTGAGCAGGCGCGTGCTGCACGCG
CCGCCGCCATCCGCCGCCGCAAGGCCACCTCCACCTCGTCCTCCCCACTT
CCTGAAGACCCTTGCCTCAGCGAAGAGCAAATCGTTGAGTTGTTACAAAA
CTGCATCAAGCTTGCTAGTGAAAATAAAATAAACCAGAACAACACTTGGG
AGCTGAAGCTGATAGACCACCTTAGTGAGATCATTAAAGTTGAAACAGTT
GGAGATGCAGAGACTAATTTCCAAAAGGCAAGTTGTACGTTGGAGGCAGG
GGTGAAAATTTACTCTGTGAGGGTTGATGCAGTGCATGCCCAAGCGTATA
AGGTCCTTGGTGGAATCACTCCGGCTGGTCAAAAGGAAGATTAAAAAAAC
CATCACAGCAGGTGAAAATGTTGACAACAGGACAAATGCAATTCATCCAA
AAAAAAACTTTGAAAAAAAAATTTTCCCCACTGTCAACACTGGACTCCTT
CTTTTAAAATTTTAAAGGAAAAAAATTTTGATGGTTGCATTTGGCGGGGG
ATCCCCCTAATCCCACCAAAAAATCCTGCACAATTTTGGATGAAGGGGGG
AGCCCGAAGGGCCCCCCCAAAGGAAAAAAATCCTTGGGAATTAAATTGGG
GGGGAAAGGGGGGGGGGGGGGTTTTTTTTTAATTTTTCTTTATAAAAAAG
GGGGCCCGCGGGGGGGGAGGGGGGTGGAAGAAC
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