EY679706

Overview
NameEY679706
Unique NameEY679706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10550 contig Csv1_Contig10550:494..1067. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY679706 vs. ExPASy Swiss-Prot
Match: PMM_SOYBN (Phosphomannomutase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 9.596e-43
Identity = 78/86 (90.70%), Postives = 84/86 (97.67%), Query Frame = 2
Query:    2 SVLRENFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFL 259
            SVLRE FAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLD FNEIHFFGDKTYKGGNDHEI+ESERTVGHTVTSP+DT+++CK+LFL
Sbjct:  160 SVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPDDTVKQCKSLFL 245          
BLAST of EY679706 vs. ExPASy Swiss-Prot
Match: PMM_TOBAC (Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.762e-42
Identity = 77/88 (87.50%), Postives = 83/88 (94.32%), Query Frame = 2
Query:    2 SVLRENFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 265
            SVLRE FAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL++FNEIHFFGDKTYKGGNDHEI+ESERTVGHTVTSPEDT+++C   FL K
Sbjct:  160 SVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFNEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPEDTVKQCSEQFLGK 247          
BLAST of EY679706 vs. ExPASy Swiss-Prot
Match: PMM_SOLLC (Phosphomannomutase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.762e-42
Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 2
Query:    2 SVLRENFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 265
            SVLRE FAH NLTFSIGGQISFDVFPQGWDKTYCLRYL++FNEIHFFGDKTYKGGNDHEI+ESERTVGHTVTSPE+T+++C  LFL K
Sbjct:  160 SVLREKFAHFNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFNEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPEETLKQCSVLFLGK 247          
BLAST of EY679706 vs. ExPASy Swiss-Prot
Match: PMM_WHEAT (Phosphomannomutase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.123e-42
Identity = 75/88 (85.23%), Postives = 85/88 (96.59%), Query Frame = 2
Query:    2 SVLRENFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 265
            SVLRE FAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL++F EIHFFGDKTYKGGNDHEIFES+RTVGHTVTSP DT+++CK++FL++
Sbjct:  162 SVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIFLSE 249          
BLAST of EY679706 vs. ExPASy Swiss-Prot
Match: PMM_ORYSJ (Phosphomannomutase OS=Oryza sativa subsp. japonica GN=PMM PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 1.810e-41
Identity = 74/88 (84.09%), Postives = 85/88 (96.59%), Query Frame = 2
Query:    2 SVLRENFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 265
            SVLRE FAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL++F EIHFFGDKTYKGGND+EIFES+RT+GHTVTSP+DT E+C++LF++K
Sbjct:  161 SVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFQEIHFFGDKTYKGGNDYEIFESDRTIGHTVTSPDDTAEQCRSLFMSK 248          
BLAST of EY679706 vs. ExPASy Swiss-Prot
Match: PMM_ORYSI (Phosphomannomutase OS=Oryza sativa subsp. indica GN=PMM PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.810e-41
Identity = 74/88 (84.09%), Postives = 85/88 (96.59%), Query Frame = 2
Query:    2 SVLRENFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 265
            SVLRE FAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL++F EIHFFGDKTYKGGND+EIFES+RT+GHTVTSP+DT E+C++LF++K
Sbjct:  161 SVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFQEIHFFGDKTYKGGNDYEIFESDRTIGHTVTSPDDTAEQCRSLFMSK 248          
BLAST of EY679706 vs. ExPASy Swiss-Prot
Match: PMM_ARATH (Phosphomannomutase OS=Arabidopsis thaliana GN=PMM PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.446e-38
Identity = 68/85 (80.00%), Postives = 82/85 (96.47%), Query Frame = 2
Query:    8 LRENFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLA 262
            LRE FAHLNLTFSIGGQISFDVFP+GWDKTYCL+YL+DF+EIHFFGDKTY+GGND+EI+ES +T+GH+VTSP+DT+ KCKALF++
Sbjct:  162 LRERFAHLNLTFSIGGQISFDVFPKGWDKTYCLQYLEDFSEIHFFGDKTYEGGNDYEIYESPKTIGHSVTSPDDTVAKCKALFMS 246          
BLAST of EY679706 vs. ExPASy Swiss-Prot
Match: PMM_SCHPO (Phosphomannomutase OS=Schizosaccharomyces pombe GN=pmm1 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.757e-28
Identity = 57/86 (66.28%), Postives = 70/86 (81.40%), Query Frame = 2
Query:    5 VLRENFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 256
            VLRE F    LTFSIGGQISFDVFP GWDKTYCL++++   F+ IHFFGDKTYKGGND+EIF   RT+GH+VT+P+DT+ + K +F
Sbjct:  170 VLREKFKDYGLTFSIGGQISFDVFPAGWDKTYCLQHVEKEGFDTIHFFGDKTYKGGNDYEIFVDPRTIGHSVTNPDDTIAELKKIF 255          
BLAST of EY679706 vs. ExPASy Swiss-Prot
Match: PMM2_MOUSE (Phosphomannomutase 2 OS=Mus musculus GN=Pmm2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.148e-26
Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 2
Query:    8 LRENFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 256
            LR+ FA   LTFSIGGQIS DVFP+GWDK YCLR+L+   +  I+FFGDKT  GGNDHEIF   RTVG+TVT+PEDT   C+ LF
Sbjct:  157 LRKEFAGKGLTFSIGGQISIDVFPEGWDKRYCLRHLEHAGYKTIYFFGDKTMPGGNDHEIFTDPRTVGYTVTAPEDTRRICEGLF 241          
BLAST of EY679706 vs. ExPASy Swiss-Prot
Match: PMM2_MACFA (Phosphomannomutase 2 OS=Macaca fascicularis GN=PMM2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.148e-26
Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 2
Query:    8 LRENFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 256
            LR+ FA   LTFSIGGQISFDVFP GWDK YCLR++  D +  I+FFGDKT  GGNDHEIF   RTVG++VT+PEDT   C+ LF
Sbjct:  161 LRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTVGYSVTAPEDTRRICEELF 245          
The following BLAST results are available for this feature:
BLAST of EY679706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PMM_SOYBN9.596e-4390.70Phosphomannomutase OS=Glycine max PE=2 SV=1[more]
PMM_TOBAC4.762e-4287.50Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1[more]
PMM_SOLLC4.762e-4286.36Phosphomannomutase OS=Solanum lycopersicum PE=2 SV... [more]
PMM_WHEAT8.123e-4285.23Phosphomannomutase OS=Triticum aestivum PE=2 SV=1[more]
PMM_ORYSJ1.810e-4184.09Phosphomannomutase OS=Oryza sativa subsp. japonica... [more]
PMM_ORYSI1.810e-4184.09Phosphomannomutase OS=Oryza sativa subsp. indica G... [more]
PMM_ARATH2.446e-3880.00Phosphomannomutase OS=Arabidopsis thaliana GN=PMM ... [more]
PMM_SCHPO1.757e-2866.28Phosphomannomutase OS=Schizosaccharomyces pombe GN... [more]
PMM2_MOUSE2.148e-2665.88Phosphomannomutase 2 OS=Mus musculus GN=Pmm2 PE=2 ... [more]
PMM2_MACFA2.148e-2665.88Phosphomannomutase 2 OS=Macaca fascicularis GN=PMM... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-B04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679706 ID=EY679706; Name=EY679706; organism=Citrus sinensis; type=EST; length=574bp
ATCTGTGCTTCGGGAGAACTTTGCTCACCTTAACTTGACATTTTCAATTG
GAGGACAGATAAGCTTTGATGTGTTTCCCCAGGGATGGGACAAGACATAC
TGCTTGAGATACCTTGATGACTTCAATGAAATTCACTTTTTTGGGGACAA
AACTTACAAGGGAGGGAATGATCATGAAATTTTTGAATCCGAGCGAACAG
TGGGTCACACAGTTACCAGCCCTGAGGATACTATGGAAAAGTGTAAGGCT
CTCTTCCTGGCTAAACCGTGAATTTGGGAGAAGTTATAGTAAGTCTACAA
ACACGAGAGAATAATTCGTATTTCTAATGCGAGCAATTCAATGTAATTTT
ATTTGATCAATTGAGAAAGGCATTTGCCAATTGGATTCGTTGTATTTGAT
GTATGGATATGTTGCGGTTGTTTGATCGCGGGGTAAGTTCCTGCATGCTG
GATGTAGGAGTGCAAAATCTCCGTTAAAAACACGGTAGCGGCAGCAAAAA
CCTGCACATGAACACTATAATATATCGTTTCATAATCCAATAAACAAATT
TCTTTTTATAAAAAAAAAAAAAAA
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