EY679667

Overview
NameEY679667
Unique NameEY679667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT1_SORBI (Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 3.932e-103
Identity = 184/203 (90.64%), Postives = 187/203 (92.12%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 203
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 3.932e-103
Identity = 184/203 (90.64%), Postives = 187/203 (92.12%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 203
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 3.932e-103
Identity = 184/203 (90.64%), Postives = 187/203 (92.12%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 203
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 6.706e-103
Identity = 183/203 (90.15%), Postives = 187/203 (92.12%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TD+LMKIL +  + F+
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFT 203
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT3_PEA (Actin-3 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 6.706e-103
Identity = 183/203 (90.15%), Postives = 187/203 (92.12%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MA+ EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    1 MAEAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDGLMKILTERGYTFT 203
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT1_TOBAC (Actin OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 6.706e-103
Identity = 184/203 (90.64%), Postives = 187/203 (92.12%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFT 203
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 6.706e-103
Identity = 184/203 (90.64%), Postives = 187/203 (92.12%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 203
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT11_SOLTU (Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 8.759e-103
Identity = 183/203 (90.15%), Postives = 188/203 (92.61%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH+GVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TD+LMKIL +  + F+
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHSGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFT 203
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT_GOSHI (Actin OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 1.144e-102
Identity = 183/203 (90.15%), Postives = 187/203 (92.12%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TDALMKIL +  + F+
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFT 203
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT4_ARATH (Actin-4 OS=Arabidopsis thaliana GN=ACT4 PE=1 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 1.494e-102
Identity = 183/203 (90.15%), Postives = 187/203 (92.12%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFT 203
The following BLAST results are available for this feature:
BLAST of EY679667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
ACT1_SORBI3.932e-10390.64Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1[more]
ACT1_ORYSJ3.932e-10390.64Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE... [more]
ACT1_ORYSI3.932e-10390.64Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2... [more]
ACT7_ARATH6.706e-10390.15Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1[more]
ACT3_PEA6.706e-10390.15Actin-3 OS=Pisum sativum PE=2 SV=1[more]
ACT1_TOBAC6.706e-10390.64Actin OS=Nicotiana tabacum PE=3 SV=1[more]
ACT11_ARATH6.706e-10390.64Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=... [more]
ACT11_SOLTU8.759e-10390.15Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1[more]
ACT_GOSHI1.144e-10290.15Actin OS=Gossypium hirsutum PE=3 SV=1[more]
ACT4_ARATH1.494e-10290.15Actin-4 OS=Arabidopsis thaliana GN=ACT4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-F12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679667 ID=EY679667; Name=EY679667; organism=Citrus sinensis; type=EST; length=937bp
GAAGTTAGAAAATGGCAGATACTGAGGATATTCAGCCTCTTGTTTGTGAC
AATGGGACTGGAATGGTGAAGGCTGGATTTGCCGGAGATGATGCTCCAAG
AGCTGTGTTCCCCAGCATTGTGGGTCGCCCTCGCCACACTGGAGTTATGG
TTGGTATGGGTCAGAAAGATGCCTATGTTGGTGATGAGGCTCAATCCAAA
AGAGGTATTTTGACTTTGAAATACCCAATCGAGCATGGCATTGTTAGCAA
CTGGGACGATATGGAGAAAATCTGGCATCACACATTTTATAATGAGCTTC
GTGTGGCTCCGGAAGAGCATCCGGTTCTTCTCACTGAGGCTCCCCTTAAT
CCAAAGGCCAATCGTGAGAAGATGACACAGATTATGTTTGAGACCTTTAA
CACCCCTGCTATGTATGTTGCTATCCAGGCTGTGCTTTCTCTCTATGCTA
GCGGTCGTACAACTGGTATTGTTCTGGACTCTGGAGATGGTGTCAGCCAC
ACAGTTCCCATCTATGAAGGTTATGCCCTTCCACACGCCATCCTCCGACT
GGACCTGGGCGGTCGTGACCTTACAGACGCCCTTATGAAAATTCTTAACC
AAGCGTGGTTTTTCTTTTCCCCACAAGTGGCTGGAACGGAAAATTGTTAG
GGACATGAAGGAGAAATTTACCCTAATTTGCTCTTGACTAAGGACAAGAG
CTAAAAAACACAAAAGACAACCTCCACCTGTGGAAAAAAACCTTTGAACT
CCCTGATGGCGCAGGTCCTCCTTATTTGGGGCCGAACGAATTCCGGGTCC
CACAAACACCCATTCCCCACACACCTGGGACGGGGGAACGGAAGCACGGC
GGGCCTCACATGGACCCAGTCAACCAACCACTATTTGAGTGCGGGAGAGA
TACACGAACAAACAAAGGCAGACCTACCCCGGGCGCC
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