EY679649

Overview
NameEY679649
Unique NameEY679649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length997
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679649 vs. ExPASy Swiss-Prot
Match: SPT20_HUMAN (Spermatogenesis-associated protein 20 OS=Homo sapiens GN=SPATA20 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 3.001e-32
Identity = 67/129 (51.94%), Postives = 81/129 (62.79%), Query Frame = 1
Query:  136 ELPQNALRL---CAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYH--SKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYS 507
            +LP +A  +   C +QL + YD  +GGF  APKFP PV +  +  +  S +L   G     S  Q+M L TL+ MA GGI DHVG GFHRYS D +WHVPHFEKMLYDQ QLA  Y  AF L+ D FYS
Sbjct:  235 QLPPSAATVNNRCFQQLDEGYDEEYGGFAEAPKFPTPVILSFLFSYWLSHRLTQDG-----SRAQQMALHTLKMMANGGIRDHVGQGFHRYSTDRQWHVPHFEKMLYDQAQLAVAYSQAFQLSGDEFYS 358          

HSP 2 Score: 30.4166 bits (67), Expect = 3.001e-32
Identity = 17/48 (35.42%), Postives = 25/48 (52.08%), Query Frame = 2
Query:  497 FSIHICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKRKEHSMY 640
            F   + + IL Y+ R +    G  +SAEDADS    G  ++ KE + Y
Sbjct:  356 FYSDVAKGILQYVARSLSHRSGGFYSAEDADSPPERG--QRPKEGAYY 401          
BLAST of EY679649 vs. ExPASy Swiss-Prot
Match: SPT20_RAT (Spermatogenesis-associated protein 20 OS=Rattus norvegicus GN=Spata20 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.124e-31
Identity = 63/129 (48.84%), Postives = 82/129 (63.57%), Query Frame = 1
Query:  136 ELPQNALRL---CAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYH--SKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYS 507
            +LP +A  +   C +QL + YD  +GGF  APKFP PV +  +  +  S ++   G     S  Q+M L TL+ MA GGI DHVG GFHRYS D +WH+PHFEKMLYDQ QL+ VY  AF ++ D F+S
Sbjct:  238 QLPPSAATMNSRCFQQLDEGYDEEYGGFAEAPKFPTPVILNFLFSYWLSHRVTQDG-----SRAQQMALHTLKMMANGGIRDHVGQGFHRYSTDRQWHIPHFEKMLYDQAQLSVVYCQAFQISGDEFFS 361          

HSP 2 Score: 31.187 bits (69), Expect = 1.124e-31
Identity = 17/48 (35.42%), Postives = 26/48 (54.17%), Query Frame = 2
Query:  497 FSIHICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKRKEHSMY 640
            F   + + IL Y+ R++    G  +SAEDADS    G   K +E ++Y
Sbjct:  359 FFSDVAKGILQYVTRNLSHRSGGFYSAEDADSPPERGV--KPQEGALY 404          
BLAST of EY679649 vs. ExPASy Swiss-Prot
Match: SPT20_MOUSE (Spermatogenesis-associated protein 20 OS=Mus musculus GN=Spata20 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.481e-31
Identity = 63/129 (48.84%), Postives = 82/129 (63.57%), Query Frame = 1
Query:  136 ELPQNALRL---CAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYH--SKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYS 507
            ++P +A  +   C +QL + YD  +GGF  APKFP PV +  +  +  S +L   G     S  Q+M L TL+ MA GGI DHVG GFHRYS D +WH+PHFEKMLYDQ QL+ VY  AF ++ D FY+
Sbjct:  239 QIPASAATMNSRCFQQLDEGYDEEYGGFAEAPKFPTPVILNFLFSYWLSHRLTQDG-----SRAQQMALHTLKMMANGGIQDHVGQGFHRYSTDRQWHIPHFEKMLYDQAQLSVVYTQAFQISGDEFYA 362          

HSP 2 Score: 29.261 bits (64), Expect = 2.481e-31
Identity = 14/37 (37.84%), Postives = 19/37 (51.35%), Query Frame = 2
Query:  497 FSIHICRDILDYLRRDMIGPGGEIFSAEDADSAETEG 607
            F   + + IL Y+ R +    G  +SAEDADS    G
Sbjct:  360 FYADVAKGILQYVTRTLSHRSGGFYSAEDADSPPERG 396          
BLAST of EY679649 vs. ExPASy Swiss-Prot
Match: YP65_CAEEL (Uncharacterized protein B0495.5 OS=Caenorhabditis elegans GN=B0495.5 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 6.023e-26
Identity = 52/103 (50.49%), Postives = 67/103 (65.05%), Query Frame = 1
Query:  184 SYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTK 492
            S+DSR GGFG APKFP+  ++  ++  +    ++ K   A +   M+  TL+ MA GGIHDH+G GFHRYSV   WH+PHFEKMLYDQ QL   Y D   LT+
Sbjct:  205 SFDSRLGGFGRAPKFPKACDLDFLITFAASENESEK---AKDSIMMLQKTLESMADGGIHDHIGNGFHRYSVGSEWHIPHFEKMLYDQSQLLATYSDFHKLTE 304          

HSP 2 Score: 27.335 bits (59), Expect = 6.023e-26
Identity = 13/38 (34.21%), Postives = 21/38 (55.26%), Query Frame = 2
Query:  506 HICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRK 619
            H+  DI  Y+++     GG  ++AEDADS     ++ K
Sbjct:  312 HVINDIYQYMQKISHKDGG-FYAAEDADSLPNHNSSNK 348          
BLAST of EY679649 vs. ExPASy Swiss-Prot
Match: YYAL_BACSU (Uncharacterized protein yyaL OS=Bacillus subtilis GN=yyaL PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.963e-25
Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = 1
Query:  124 KLPDELPQNALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFY 504
            K  + L ++A+    +QL+  +D+ +GGFG APKFP P    M++Y  +   +TG+        K    TL  MA GGI+DH+G GF RYS D+ W VPHFEKMLYD   L   Y +A+ +T++  Y
Sbjct:  175 KTGEGLSESAIHRTFQQLASGFDTIYGGFGQAPKFPMP---HMLMYLLRYDHNTGQENALYNVTK----TLDSMANGGIYDHIGYGFARYSTDDEWLVPHFEKMLYDNALLLTAYTEAYQVTQNSRY 294          

HSP 2 Score: 32.3426 bits (72), Expect = 4.963e-25
Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 2
Query:  509 ICRDILDYLRRDMIGPGGEIFSAEDADSAETEG 607
            IC  I+ +++R+M    G  FSA DAD+   EG
Sbjct:  297 ICEQIITFIQREMTHEDGSFFSALDADTEGEEG 329          
The following BLAST results are available for this feature:
BLAST of EY679649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SPT20_HUMAN3.001e-3251.94Spermatogenesis-associated protein 20 OS=Homo sapi... [more]
SPT20_RAT1.124e-3148.84Spermatogenesis-associated protein 20 OS=Rattus no... [more]
SPT20_MOUSE2.481e-3148.84Spermatogenesis-associated protein 20 OS=Mus muscu... [more]
YP65_CAEEL6.023e-2650.49Uncharacterized protein B0495.5 OS=Caenorhabditis ... [more]
YYAL_BACSU4.963e-2541.73Uncharacterized protein yyaL OS=Bacillus subtilis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-E05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679649 ID=EY679649; Name=EY679649; organism=Citrus sinensis; type=EST; length=997bp
CCACGCGTCCGCGGACGCGTGGGGAAAGATGCTTGGGATAAAAAGAGGGA
TATGCTTGCTCAGAGTGGAGCCTTTGCTATTGAGCAGCTGTCTGAAGCAT
TATCGGCAAGTGCAAGTTCAAATAAATTGCCAGATGAACTCCCACAAAAT
GCATTGCGTCTGTGTGCTGAGCAACTTTCCAAAAGCTATGACTCTCGGTT
TGGGGGGTTTGGATCTGCACCCAAGTTTCCTAGACCAGTTGAGATTCAAA
TGATGCTTTATCATTCGAAGAAGTTGGAGGACACTGGAAAATCTGGTGAA
GCGAGCGAAGGTCAAAAAATGGTTTTGTTTACCTTGCAGTGCATGGCAAA
GGGGGGCATCCATGATCATGTTGGTGGTGGCTTTCACAGATATAGTGTGG
ATGAGCGCTGGCACGTTCCACATTTTGAGAAAATGCTGTACGATCAAGGG
CAACTTGCTAATGTTTACCTAGATGCTTTTTCCCTCACAAAAGATGTTTT
CTATTCATATATGTCGGGATATTCTTGATTATTTGAGAAGAGACATGATT
GGACCTGGAGGTGAAATTTTCTCTGCAGAGGATGCTGATAGTGCTGAGAC
TGAGGGTGCCACTAGAAAAAGGAAGGAGCATTCTATGTATGGGACCCACC
AAAGAGGTTGAGGACATCCTTGGGGAACATGGAATTCTTTTTAAAGGAAC
ACTATTACCTAAAGCCTACTGGGAAATTGGGATCTTTCCAAGAATAGACG
ATCCCCATAACCAATTCCAAGGGGAAAGAAAGGGCCTTATTGAACTAAAT
GAATTCTTCCGCCCCCGGGTTCCAAAACTTGGGTTAGGCCCCCGGGGAAA
AAAATTCAAAATATTTTTTGGGGGGGAAGGGTAAAAAAAAAACTGGTTTG
TGACCAAAAAAATCCAAAAAAAACCAAGGGGGCCACTTTTTGGAAAAAAA
AAAGGGGAATTTTTTCACAGGGGAAAGGGGGTTTTTTTGTTTTTTTC
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