EY679632

Overview
NameEY679632
Unique NameEY679632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY679632_ssr124 microsatellite EY679632_ssr124:124..135. BLAST: Citrus ESTs to Prunus persica proteins V1
EY679632_ssr9 microsatellite EY679632_ssr9:9..24. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY679632 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 3.410e-54
Identity = 120/243 (49.38%), Postives = 148/243 (60.91%), Query Frame = 1
Query:   46 MGIELHSVKVISGGWSVAVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIV----KSSAFNFLVPSDQNGGSEFTGASEHDGVDSASWLIPN--SKPGIENAG--EMKSGDMFFIDPFIDLNDFDYPNSFQNH-HSAGMDSVVPVQXXXXXXXXXXXXXXXXXXXXMKICFEIDFRKSQ 747
            MG  L S+K ISGGW  A + CD CK+  AAVFCRVDSAFLC+ CD RIH+   +H RVW+CEVCEQAPAAVTCKADAAALCV+CD DIHSANPLA RHER+P+E FFDSA++ V     SS F  L  S     +     ++  G+    WL+PN  ++P     G   MK    F    F  L DF++PNSF +H ++AG DS+VPVQ                       CF+IDF +S+
Sbjct:    1 MGFGLESIKSISGGWGAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIHS-FTRHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGILGSSTTVDLTAVPVMADDLGL--CPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEFPNSFNHHQNNAGGDSLVPVQTKTEPLPLTNNDH----------CFDIDFCRSK 230          
BLAST of EY679632 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 3.779e-45
Identity = 105/217 (48.39%), Postives = 138/217 (63.59%), Query Frame = 1
Query:   94 VAVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFD--SADSIVKSSAFNFLVP---SDQNGGSEFTGASEHDGVDSASW-LIPNSK------------------PGIENAGEMKSGDMFFI---DPFIDLN--DFDYPNSFQNHHSAGMDSVVPVQ 648
            +A K CD+CK+A AA++CR D+AFLCL+CD ++H      ++HARVWMCEVCEQAPA VTCKADAAALCVTCD DIHSANPLARRHER+P+ PF+D  S+D  VK +A NFL     SD +G     G+ E +  ++ASW L+PN K                  PG  ++ EM +G  +     DP++DL+  + D        +S+G D VVPV+
Sbjct:    1 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFSDIDG----NGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPG--DSPEMNTGQQYLFSDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVE 211          
BLAST of EY679632 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.902e-39
Identity = 92/186 (49.46%), Postives = 117/186 (62.90%), Query Frame = 1
Query:  109 CDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIVK-SSAFNFLVPSDQNGGSEFTGASEHDGVDSASWLIPNSKPGIENAGEMKSGDMFFIDPFIDLNDFDYP--NSFQNHHSAGMDSVVPVQ 648
            CD+CK+ AA +FCR D+AFLC +CD +IH      ++H RVW+CEVCEQAPA VTCKADAAALCVTCD DIHSANPL+RRHER+PI PF+D+       SS+ NF+   D++GG             +ASWL+  +K GIE        ++F        +D DYP        +S+G D VVPVQ
Sbjct:    8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFV---DEDGGDV-----------TASWLL--AKEGIEIT------NLF--------SDLDYPKIEVTSEENSSGNDGVVPVQ 163          
BLAST of EY679632 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.001e-34
Identity = 83/201 (41.29%), Postives = 121/201 (60.20%), Query Frame = 1
Query:   79 SGGWSVAVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIVKSSAFNFLVPSDQNGGSEFTGASEHDGVDSASWLIPNSKPGIENAGEMKSGDMFFIDPFIDLNDF--DYPNSFQNH------HSAGMDSVVPVQ 648
            SG W+ A   CDTC++AA  V+C  DSA+LC  CD R+H      ++H RV +C+ CE APAA  CKADAA+LC  CD +IHSANPLARRH+R+PI P        + +++ + + PS+ +        ++ D  + ASWL+PN  PG +N G   +G +F ++ ++DL D+     N F+++       S G D VVP+Q
Sbjct:    9 SGTWARA---CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILP--------LSANSCSSMAPSETDAD------NDEDDREVASWLLPN--PG-KNIGNQNNGFLFGVE-YLDLVDYSSSMDNQFEDNQYTHYQRSFGGDGVVPLQ 188          
BLAST of EY679632 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.731e-34
Identity = 83/208 (39.90%), Postives = 115/208 (55.29%), Query Frame = 1
Query:   76 ISGGWSVAVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFD-SADSIVKSSAFNFLVPSDQNGGSEFTGASEHDGVDSASWLIPNSKPGIENAGEMKSGDMFFIDPFIDLNDF--------DYPNSFQ-----NHHSAGMDSVVPVQ 648
            +   W+ A   CDTC++AA  V+CR DSA+LC +CD ++H      ++H RV +C+ CE+APAA  CKADAA+LC TCD++IHSANPLARRH+R+PI P  + S  S   + +    V   +N         + D  ++ASWL+PNS     N      G     D F++L D+        D  N +Q        S G D VVP+Q
Sbjct:    4 VESNWAQA---CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIG-----DEFLNLVDYSSSDKQFTDQSNQYQLDCNVPQRSYGEDGVVPLQ 203          
BLAST of EY679632 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.668e-32
Identity = 79/217 (36.41%), Postives = 116/217 (53.46%), Query Frame = 1
Query:   76 ISGGWSVAVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF----FDSADSIVKSSAFNFLVPS-----DQNGGSEFTGASEHDGVDSASWLIPNSKPGIENAGEMKSGDMFFIDPFIDLNDFD------YPNSFQNHH--------SAGMDSVVPVQ 648
            I  G +   +PCDTC++ A  V+C  DSA+LC++CD ++H+     ++H RV +CE CE+APAA  C+AD A+LC  CD+++HSANPLARRH+R+PI P     F S  +    S      P      DQ  G E     + D  + ASWL PNS     N    ++  + F D +++L D++      +   +  H         S G D VVP++
Sbjct:    9 IGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQEEGEE----GDKDAKEVASWLFPNSDKNNNN----QNNGLLFSDEYLNLVDYNSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPLK 217          
BLAST of EY679632 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.814e-13
Identity = 35/90 (38.89%), Postives = 47/90 (52.22%), Query Frame = 1
Query:  106 PCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 366
            PCD C    A +FCR D+A LCL CD ++H       KH R  +C+ C   P +V C  D   LC  CD D+H +  ++  H R  +E F
Sbjct:    8 PCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGF 97          
BLAST of EY679632 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.814e-13
Identity = 35/93 (37.63%), Postives = 49/93 (52.69%), Query Frame = 1
Query:   97 AVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 366
            +V  C+ C    A +FCR D+A LCL CD  +H+      KH R  +C+ C + P +V C  D   LC  CD D+H +   +  HER  +E F
Sbjct:    8 SVVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100          
BLAST of EY679632 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.472e-12
Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 1
Query:  109 CDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 366
            CD C ++ A V+C+ DSA LCL CD ++H       KH R  +C+ C ++P+++ C+ + + LC  CD   H+A+  +  H R P E F
Sbjct:   13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGF 99          
BLAST of EY679632 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.227e-11
Identity = 41/132 (31.06%), Postives = 59/132 (44.70%), Query Frame = 1
Query:  109 CDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWM------------CEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIVKSSAFNFLVPSDQNGGSEFTGAS 459
            CD C    A+VFC  D A LC  CD ++H+     +KH R  +            C++C+   A + C+ D A LC  CD+ IH+AN   ++H+R  +     SA S V          S  N      G+S
Sbjct:    5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKSSSSSSSNQDFSVPGSS 136          
The following BLAST results are available for this feature:
BLAST of EY679632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
COL5_ARATH3.410e-5449.38Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... [more]
COL4_ARATH3.779e-4548.39Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis... [more]
COL3_ARATH6.902e-3949.46Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis... [more]
COL2_ARATH3.001e-3441.29Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... [more]
COL1_ARATH8.731e-3439.90Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis... [more]
CONS_ARATH3.668e-3236.41Zinc finger protein CONSTANS OS=Arabidopsis thalia... [more]
COL15_ARATH3.814e-1338.89Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsi... [more]
COL14_ARATH3.814e-1337.63Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsi... [more]
COL13_ARATH2.472e-1237.08Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsi... [more]
STHX_ARATH1.227e-1131.06Probable salt tolerance-like protein At1g75540 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-C12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679632 ID=EY679632; Name=EY679632; organism=Citrus sinensis; type=EST; length=939bp
CAAAACTCAAAGAAAGAAAGAAAGAGGCTTTATTTAGTAATGCCCATGGG
AATTGAATTACATAGCGTGAAGGTTATTTCCGGCGGGTGGAGCGTGGCGG
TGAAGCCATGCGACACGTGCAAAGCGGCGGCGGCGGCTGTTTTCTGCAGA
GTTGACTCTGCTTTCCTATGCCTGAACTGCGATTTAAGAATCCACAATTG
CATGAACAAACACGCGCGTGTCTGGATGTGCGAGGTCTGCGAGCAGGCCC
CTGCGGCTGTCACGTGTAAGGCTGATGCGGCTGCCTTGTGTGTCACGTGC
GACAATGATATCCACTCTGCCAACCCTTTAGCCCGGCGCCATGAACGCCT
CCCTATTGAGCCGTTCTTCGACTCGGCTGACTCGATTGTCAAGTCGTCGG
CTTTTAACTTCCTGGTTCCGAGTGATCAAAATGGCGGCTCAGAGTTTACT
GGCGCCAGTGAACACGACGGCGTGGACTCTGCTTCCTGGCTGATTCCGAA
TTCGAAACCTGGAATTGAAAACGCGGGTGAAATGAAATCCGGGGATATGT
TTTTCATCGATCCGTTTATTGATTTGAATGATTTTGATTATCCCAATTCA
TTTCAAAATCATCATAGCGCTGGGATGGACAGTGTTGTGCCTGTTCAAAC
AACCTAAACCGGAACCATTTCCAGCTCAAGCTGCAGCTCCCATTTCCTTT
GATCAACAATGAAAATTTGCTTCGAAATCGATTTTCGGAAATCCCAACCT
CCCTTCCTTCCACTCCCAAAGCCCAAAGGTAATTTTCTAAACCCAAAAGC
CACATTTTTTCCCTCTTTTTTTTTTTTGTTTCCCGGCCTTTTAACCACCT
GGGCCGGGGGCGGCTTAGAAAAAAAAATCAAAAAAAAAGCGCACACAGGT
TTTCAAACCTAACCCCCATTTTTTTTTTTTCATTTTTAG
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