EY744722

Overview
NameEY744722
Unique NameEY744722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744722 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.333e-31
Identity = 74/128 (57.81%), Postives = 91/128 (71.09%), Query Frame = 3
Query:  111 TRSLSQVLNFMDPMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDATVSLEQNSLVIRXXXXXXXXXXXS--VRRYTSRIDLPQKLYRTDLITAEMKNGVPKVTGPKEKEKERADV 476
            TRSLSQ+LNFMD ++E P  S TRG    G+RRGW+ KE DDAL+L IDMPGL +ED  ++LEQN+LVIR           S   RR+TSRI+LP+K+Y+TD I AEMKNGV KV  PK KE ER ++
Sbjct:   77 TRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDERNNI 204          
BLAST of EY744722 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.214e-30
Identity = 71/123 (57.72%), Postives = 88/123 (71.54%), Query Frame = 3
Query:  114 RSLSQVLNFMDPMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDATVSLEQNSLVIR--XXXXXXXXXXXSVRRYTSRIDLPQKLYRTDLITAEMKNGVPKVTGPKEKEKERADV 476
            RSLSQVLN +D +T+NP  S      RRGWDA+ET+DAL L +DMPGLGKED  +S+EQN+L I+             S RR++SRIDLP+KLY+ D+I AEMKNGV KVT PK KE+ER +V
Sbjct:   77 RSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEEERNNV 196          
BLAST of EY744722 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.053e-29
Identity = 74/130 (56.92%), Postives = 84/130 (64.62%), Query Frame = 3
Query:  111 TRSLSQVLNFMDPMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDATVSLEQNSLVIR----XXXXXXXXXXXSVRRYTSRIDLPQKLYRTDLITAEMKNGVPKVTGPKEKEKERADV 476
            TRS+SQVLN MD   ENP  S TRG    G RRGWD KE DDAL L IDMPGL +ED  ++LEQ++LVIR                 RR+TSRI LP K+Y+ D I AEMKNGV KV  PK KE+ER DV
Sbjct:   75 TRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQERNDV 204          
BLAST of EY744722 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.501e-29
Identity = 65/126 (51.59%), Postives = 85/126 (67.46%), Query Frame = 3
Query:  111 TRSLSQVLNFMDPMTENPFFSGTRGG---LRRGWDAKETDDALNLSIDMPGLGKEDATVSLEQNSLVIRXXXXXXXXXXXSVRRYTSRIDLPQKLYRTDLITAEMKNGVPKVTGPKEKEKERADVF 479
            TRS+ Q++N MD + ENPF + +RG    +RRGWD +E ++AL L +DMPGL KED  VS+E N+L+I+             RRY+SRI+L   LY+ D I AEMKNGV KVT PK KE+E+ DVF
Sbjct:   74 TRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVF 199          
BLAST of EY744722 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.208e-27
Identity = 58/94 (61.70%), Postives = 69/94 (73.40%), Query Frame = 3
Query:  195 RGWDAKETDDALNLSIDMPGLGKEDATVSLEQNSLVIRXXXXXXXXXXXSVRRYTSRIDLPQKLYRTDLITAEMKNGVPKVTGPKEKEKERADV 476
            RGWDA+ET+DAL+L +DMPGL KED  +S+EQN+L+I+           S RRYTSRIDLP KLY+ D I AEMKNGV KV  PK KE+ER DV
Sbjct:  112 RGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEEESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEEERKDV 205          

HSP 2 Score: 25.7942 bits (55), Expect = 2.208e-27
Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 2
Query:   89 CV*SIFTN*EPEPGPELHGSDDGES 163
            CV SIF++ E EPG E  G   G+S
Sbjct:   72 CVGSIFSDSEFEPGSEHDGPGHGQS 96          
BLAST of EY744722 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.057e-21
Identity = 59/124 (47.58%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  114 RSLSQVLNFMDPMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDATVSLEQNSLVIRXXXXXXXXXXXSV--RRYTSRIDLPQKLYRTDLITAEMKNGVPKVTGPKEKEKERADVF 479
            +SL ++L+ MD +   P        LRRGW+AKE+++AL+L +DMPGLGKE   V  EQNSLVI+                RY+ RI+L  ++YR D I AEMKNGV KV  PK KE++R DVF
Sbjct:   93 QSLGRLLSLMDDLA-TPAGRAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVPKVKEEQRRDVF 215          
BLAST of EY744722 vs. ExPASy Swiss-Prot
Match: HS26M_ORYSJ (26.2 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP26.2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.380e-17
Identity = 60/130 (46.15%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  117 SLSQVLNFM-DPMTENPFFSGTRG----GLRRG--WDAKETDDALNLSIDMPGLGKEDATVSLEQNSLVIRXXXXXXXXXXXSVR--RYTSRIDLPQKLYRTDLITAEMKNGVPKVTGPKEKEKERADVF 479
            SL ++L  M D         GT G      RRG  W AKE DDA++L + MPGLGKE   V  EQNSLVI+                RYT RI+LP   ++ D I AEMKNGV +V  PK KE+ER DVF
Sbjct:  114 SLGRLLALMEDAAVATAAAPGTNGLATAAARRGGWWVAKEDDDAVHLKVSMPGLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRVAVPKLKEEERKDVF 243          
BLAST of EY744722 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = 3
Query:  114 RSLSQVLNFMDPMTEN--PFFSGTRGG-----LRRGWDAKETDDALNLSIDMPGLGKEDATVSLEQNSLVI----RXXXXXXXXXXXSVRRYTSRIDLPQKLYRTDLITAEMKNGVPKVTGPKEK-EKERADV 476
            R++ Q+L+ MD M E+  P     RGG     +R  WD KE +  + +  DMPGL KED  +S+E N LVI    +           SV  Y +R+ LP    + D I AE+KNGV  +T PK K E++  DV
Sbjct:   93 RTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEK-DKIKAELKNGVLFITIPKTKVERKVIDV 224          
The following BLAST results are available for this feature:
BLAST of EY744722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
HS235_ARATH8.333e-3157.8123.5 kDa heat shock protein, mitochondrial OS=Arab... [more]
HS22M_PEA9.214e-3057.72Heat shock 22 kDa protein, mitochondrial OS=Pisum ... [more]
HS23M_ARATH2.053e-2956.9223.6 kDa heat shock protein, mitochondrial OS=Arab... [more]
HS23C_CHERU3.501e-2951.59Small heat shock protein, chloroplastic OS=Chenopo... [more]
HS22M_SOYBN2.208e-2761.70Heat shock 22 kDa protein, mitochondrial OS=Glycin... [more]
HS24M_ORYSJ2.057e-2147.5824.1 kDa heat shock protein, mitochondrial OS=Oryz... [more]
HS26M_ORYSJ1.380e-1746.1526.2 kDa heat shock protein, mitochondrial OS=Oryz... [more]
HS25P_ARATH3.889e-1238.3525.3 kDa heat shock protein, chloroplastic OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-G09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744722 ID=EY744722; Name=EY744722; organism=Citrus sinensis; type=EST; length=891bp
ACGATGACGGCGGAGACCACCGTGATCTCGACATTGATCGCCGTTCCGCT
CGCTCTTTCCCTCGCCGTCGTGACGACTTCTTCTCAGATGTGTTTGATCC
ATTTTCACCAACTAGGAGCCTGAGCCAGGTCCTGAACTTCATGGATCCGA
TGACGGAGAATCCTTTCTTCAGCGGCACACGTGGTGGACTGCGCAGAGGC
TGGGATGCTAAAGAAACCGATGATGCGTTGAACCTCAGCATCGACATGCC
AGGGCTGGGCAAGGAAGACGCGACAGTCTCTCTGGAGCAGAACTCGCTGG
TGATCCGAGGCGAGGGCGGAAAAGAAGGAGACGACGAAGAGAGCGTGCGT
AGGTACACCAGCAGGATTGATTTGCCACAGAAGCTCTACAGGACTGATCT
GATCACGGCTGAGATGAAGAATGGTGTGCCGAAAGTGACCGGGCCCAAGG
AGAAGGAAAAGGAGAGGGCTGATGTGTTCCCAGAGCAAGGTTGATTAAAG
CATCGGCTTTTTAGAACTAACTTTTCCGGTCCACAACATTGAGTGAGAAA
TAATTTTGGGGAATTTTAGTGGGGCCTTAAAGTTATCAAACATGCTCCCG
GACACGCGCGGGCGCCCAAATTTCCCAATTATTGGCGTCACCTCCCCCCA
TCATTTTCTAATTTTACTTTACCTTTGGCGTGGGAAAAATCTTTTTATAA
TTTTATACCCTTTTCAAACTTCCTTTTCCCAAGAACAAAAGAAAATAAAA
AAAACAAAAAACAACCGCGCCCGCCCCCCTCCTTCGACGGGCATCCAGCT
GCTTAGGGATCACGTCGGGCGGTGGGACAACTGATCATAATTGCCTCTGC
CATGGGCTGCCCCGCAACACATCTCCCTGCCGCTGAGCGGC
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