EY744697

Overview
NameEY744697
Unique NameEY744697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744697_ssr20 microsatellite EY744697_ssr20:20..29. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY744697 vs. ExPASy Swiss-Prot
Match: CSLA2_ARATH (Glucomannan 4-beta-mannosyltransferase 2 OS=Arabidopsis thaliana GN=CSLA2 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.190e-29
Identity = 62/120 (51.67%), Postives = 85/120 (70.83%), Query Frame = 2
Query:  359 MAQISPKFFIPESFQVSREDIAGQIGLIWELLKAPLIVPLLKLGVYICLAMSLMLFMERVYMGLGKIPVKLVWPKPGKPFNWQPIGNQVKLGKLNFPRCFYQIPMVHEKKGSQIPP*SAC 718
            M  +SPKF +PE+F   R +I GQ+G+IWEL+KAP+IVPLL+L VYICL MS+ML  ERVYMG+  + VKL W KP K + ++PI +  +LG  NFP    QIPM +E++  ++   +AC
Sbjct:    1 MDGVSPKFVLPETFDGVRMEITGQLGMIWELVKAPVIVPLLQLAVYICLLMSVMLLCERVYMGIVIVLVKLFWKKPDKRYKFEPIHDDEELGSSNFPVVLVQIPMFNEREVYKLSIGAAC 120          
BLAST of EY744697 vs. ExPASy Swiss-Prot
Match: CSLA9_ARATH (Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis thaliana GN=CSLA9 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.333e-22
Identity = 53/111 (47.75%), Postives = 76/111 (68.47%), Query Frame = 2
Query:  386 IPESFQVSREDIAGQIGLIWELLKAPLIVPLLKLGVYICLAMSLMLFMERVYMGLGKIPVKLVWPKPGKPFNWQPIGNQVKLGKLNFPRCFYQIPMVHEKKGSQIPP*SAC 718
            IP+SF   R+DI  Q+ ++ + ++APLIVP L+LGVYICL MS+MLF+ERVYMG+    VKL   KP K F ++PI + ++LG   +P    QIPM +E++  Q+   +AC
Sbjct:   10 IPDSFMGYRDDITMQMSMVLDQIRAPLIVPALRLGVYICLTMSVMLFVERVYMGIVISLVKLFGRKPDKRFKYEPIKDDIELGNSAYPMVLIQIPMFNEREVYQLSIGAAC 120          
BLAST of EY744697 vs. ExPASy Swiss-Prot
Match: CSLA7_ARATH (Probable mannan synthase 7 OS=Arabidopsis thaliana GN=CSLA7 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15
Identity = 41/102 (40.20%), Postives = 65/102 (63.73%), Query Frame = 2
Query:  413 EDIAGQIGLIWELLKAPLIVPLLKLGVYICLAMSLMLFMERVYMGLGKIPVKLVWPKPGKPFNWQPIGNQVKLGKLNFPRCFYQIPMVHEKKGSQIPP*SAC 718
            EDI  +IGL W+L++A ++VP+ K  V +CL MS+M F+E +YMG+  + VKL   KP K + W+ + + V+ G  ++P    QIPM +EK+  +    +AC
Sbjct:   41 EDIIARIGLWWQLIRAVVVVPVFKFLVLLCLVMSVMFFVEVMYMGIVVLYVKLFKRKPEKFYKWEAMEDDVECGSASYPMVLVQIPMYNEKEVCEQSIAAAC 142          
BLAST of EY744697 vs. ExPASy Swiss-Prot
Match: CSLA3_ARATH (Probable mannan synthase 3 OS=Arabidopsis thaliana GN=CSLA3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.499e-14
Identity = 44/106 (41.51%), Postives = 64/106 (60.38%), Query Frame = 2
Query:  404 VSREDIAGQIGLIWELLKAPLIVPLLKLGVYICLAMSLMLFMERVYMGLGKIPVKLVWPKPGKPFNWQPIG-NQVKLGKLNFPRCFYQIPMVHEKKGSQIPP*SAC 718
            V R  I G+I  IW+  +  + +P+LK  V ICL MSL+LF+ERVYM +  + VKL+   P K   W+PI  + ++L   N+P    QIPM +EK+  Q+   +AC
Sbjct:   38 VVRSGIIGEIIYIWKQTRIFVFIPILKCLVTICLVMSLLLFIERVYMSIVVVFVKLLRRTPEKVHKWEPINDDDLELANTNYPMVLIQIPMYNEKEVCQLSIGAAC 143          
BLAST of EY744697 vs. ExPASy Swiss-Prot
Match: CSLAF_ARATH (Probable mannan synthase 15 OS=Arabidopsis thaliana GN=CSLA15 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 2
Query:  335 PCFALLEKMAQISPKFFIPESFQVSREDIAGQIGLIWELLKAPLIVPLLKLGVYICLAMSLMLFMERVYMGLGKIPVKLVWPKPGKPFNWQPIGNQVKLGKLNFPRCFYQIPMVHEKKGSQIPP*SAC 718
            P  +L +    +    F  E+ + S + +   +  +W   +   IVPL K  V +CL +SL++F+E VYM L  + VKL   KP K + W+ +   ++LG  N+P    QIPM +E++  ++   +AC
Sbjct:    7 PLLSLHDLSLNLLSVMFHGETLKASVDGVGINMSTMWRETRNVFIVPLFKCIVVMCLIISLLVFVESVYMNLVVLYVKLFNRKPEKVYKWEAMQEDMELGHQNYPMVLVQIPMYNEREVFELSIGAAC 134          
BLAST of EY744697 vs. ExPASy Swiss-Prot
Match: CSLA9_ORYSJ (Probable mannan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLA9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 2
Query:  428 QIGLIWELLKAPLIVPLLKLGVYICLAMSLMLFMERVYMGLGKIPVKLVWPKPGKPFNWQPI------GNQVKLGKLN--FPRCFYQIPMVHEKKGSQIPP*SAC 718
            QI  +WE +KAP++VPLL+L V  CLAMS+MLF+E+VYM +  + V L   +P + +   PI       +  +L   N  FP    QIPM +E++  ++   +AC
Sbjct:   11 QIAAMWEQVKAPVVVPLLRLSVAACLAMSVMLFVEKVYMSVVLVGVHLFGRRPDRRYRCDPIVAAGADNDDPELADANAAFPMVLIQIPMYNEREVYKLSIGAAC 115          
BLAST of EY744697 vs. ExPASy Swiss-Prot
Match: CSLA1_ORYSJ (Glucomannan 4-beta-mannosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLA1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 36/93 (38.71%), Postives = 58/93 (62.37%), Query Frame = 2
Query:  443 WELLKAPLIVPLLKLGVYICLAMSLMLFMERVYMGLGKIPVKLVWPKPGKPFNWQPI-GNQVKLGKLNFPRCFYQIPMVHEKKGSQIPP*SAC 718
            W  ++AP+IVPLL+L V +CL MS++LF+ER+YM +    VK++  +P + +   PI  +  +LG   FP    QIPM +E++  Q+   + C
Sbjct:   15 WSQVRAPVIVPLLRLAVAVCLTMSVLLFLERMYMAVVISGVKILRRRPDRRYRCDPIPDDDPELGTSAFPVVLIQIPMFNEREVYQLSIGAVC 107          
The following BLAST results are available for this feature:
BLAST of EY744697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CSLA2_ARATH8.190e-2951.67Glucomannan 4-beta-mannosyltransferase 2 OS=Arabid... [more]
CSLA9_ARATH3.333e-2247.75Glucomannan 4-beta-mannosyltransferase 9 OS=Arabid... [more]
CSLA7_ARATH1.356e-1540.20Probable mannan synthase 7 OS=Arabidopsis thaliana... [more]
CSLA3_ARATH1.499e-1441.51Probable mannan synthase 3 OS=Arabidopsis thaliana... [more]
CSLAF_ARATH1.833e-1231.25Probable mannan synthase 15 OS=Arabidopsis thalian... [more]
CSLA9_ORYSJ4.083e-1239.05Probable mannan synthase 9 OS=Oryza sativa subsp. ... [more]
CSLA1_ORYSJ2.647e-1138.71Glucomannan 4-beta-mannosyltransferase 1 OS=Oryza ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-E04-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744697 ID=EY744697; Name=EY744697; organism=Citrus sinensis; type=EST; length=916bp
CTCTCTCTTCTTTCTTCTTTCTCTCTCTCCATTATGCCTCAATACTGCTC
TGTCTCTGCTTCATTTTGGTAGAGAGAAAAAAAAAAAAAAAACAGAGCAA
GTATTGGCTAAAAGACCAGTAAGTAAAGATCTTTCTGTTCTTCCCTTAAC
TAGGGGGAAAAAAAATAGAGAAAGAGAGAAAGTCTTTTAATTTGCGTTTT
AATTTTTGCCCATTGTGTTCAAGTTTCCATGTAAAAGCCAAGATTTGTTC
CAATTCAATCACATTGTGAAAAATTTTCCTTCTTGTTTCTTGTTTTTAAA
CCAGCATTAGCCAAAAAAATCTCTTTATCGCCTCCCCTGTTTTGCTCTGC
TAGAGAAAATGGCTCAAATTTCACCAAAATTTTTCATACCAGAGTCATTC
CAAGTGTCAAGAGAGGACATTGCAGGCCAAATTGGTTTGATTTGGGAACT
ACTCAAAGCCCCATTGATAGTCCCTTTGCTTAAACTCGGCGTCTACATTT
GCTTGGCCATGTCACTCATGCTCTTCATGGAAAGGGTTTACATGGGCCTT
GGTAAAATCCCTGTTAAGCTGGTTTGGCCAAAACCTGGAAAGCCGTTCAA
TTGGCAACCCATTGGAAACCAAGTCAAATTGGGGAAGCTCAATTTCCCCC
GTTGTTTTTATCAAATCCCAATGGTACATGAAAAAAAGGGTTCCCAAATC
CCCCCGTGAAGCGCCTGCGGGAACCCTCCTGGGCCCCCGAACCTCCTCGG
GTCCCATTGCCTTAGCACACCCAACTGCACCCGCGCCTAACACCAAAAGG
GGGGACACAAACAACGCCAAAAAGGGGACGGGCAACGCCCACCACCACAA
GAAGGCGCCACAACGAAAAGAAACTCACCCAAGGGAAAACACAGACCAGG
GGCCCCTCCAACAAAG
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