EY679466

Overview
NameEY679466
Unique NameEY679466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1048
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679466 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.697e-20
Identity = 70/160 (43.75%), Postives = 92/160 (57.50%), Query Frame = 1 
Query:    4 HVRSIRTS-DLSLNPDIRSPYLTIP-PGLSPTTLLESPVFLSNSLAQPSPTTGKFSFIP--NGNGKSSTCISEAPDKSKDNILEDINTSFAFKPVA-ESGSFSLGTRNKSFPSIEVSVQSENSPQNVNAAKVHSQYRNSLSLQVQTDFSRATTEKDNGCN 468
            +  +IRT+ D S++ ++RSP LTI  PGLSP TLLESPVFLSN LAQPSPTTGKF F+P  NGN  SS       +K+KD   +DI  SF+F PV+  S SF  GT      S++    +  S  + +A +V     N  S    ++     T+  NG N
Sbjct:   91 NTENIRTNTDFSIDSNLRSPCLTISSPGLSPATLLESPVFLSNPLAQPSPTTGKFPFLPGVNGNALSS-------EKAKDEFFDDIGASFSFHPVSRSSSSFFQGT--TEMMSVDYGNYNNRSSSHQSAEEVKPGSENIES----SNLYGIETDNQNGQN 237
The following BLAST results are available for this feature:
BLAST of EY679466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WRKY2_ARATH1.697e-2043.75Probable WRKY transcription factor 2 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-E05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679466 ID=EY679466; Name=EY679466; organism=Citrus sinensis; type=EST; length=1048bp
CCACACGTCCGAAGCATTAGAACATCTGACCTTTCTCTGAACCCTGATAT
TCGATCTCCTTACTTGACAATACCACCTGGTCTCAGCCCAACGACACTGC
TGGAGTCTCCAGTTTTCCTTTCAAATTCTCTGGCACAGCCATCTCCAACA
ACTGGAAAGTTCTCATTCATCCCAAATGGTAATGGTAAAAGTTCGACATG
TATCTCAGAGGCCCCTGATAAAAGCAAGGATAACATCTTGGAGGACATCA
ATACATCATTTGCATTTAAGCCTGTTGCAGAATCAGGTTCTTTTTCCCTT
GGTACAAGAAATAAGTCCTTTCCTAGTATTGAGGTTTCTGTTCAGTCTGA
GAATTCCCCCCAAAATGTAAATGCAGCCAAAGTCCATTCTCAATACAGAA
ACAGCCTCAGCCTCCAAGTCCAAACAGACTTCTCCAGAGCAACAACTGAA
AAGGATAATGGGTGTAATACCATCTTTGGCTGAATCAAAAGGGACTTTGA
AAATTTTGTAGGCAAAAAAGAACATTCCTCCACCACCTTGGAAGAACAGC
ATGATGAAAAAACGAGAATCAAAAGAAGGCATTGAAAATTCCATGGTTGT
TTGGGGCCGGAGAGCGATTTATCTTAAAAAAGATTATAAATTGGAAAAAA
AAAATTCAAAAAAAAATAGGCGAAAGAATGGGAGGGATAACCCGTGTAAG
ATTGTAACAAAGAGACCATCATTCCAAATATGTTCATGGTTACAAAAATA
AAGGGAAGAATATTACTTTTTAATGCCCCGAAAAAATATAACAAACTTTT
GATAAAAAGTATACCTTTCTAACACATTCCATATCTCCACCCTCACTAAA
TTTTTTAATATGAAACTTTTGTAGTGTTCATAAAACTATTGTTACTAAAC
CCTAATTTCATCTAATAACTAAATAGAAAAAATTGTTAAAGATAACTATT
TCAATAATGGAGAATCTGTACGGATAGTAATGTTGCTCTTTACTATCAGC
ATATTGGAGAATAAATGATAACACATATTCTAAAGTGACGAGTCATCT
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