EY679446

Overview
NameEY679446
Unique NameEY679446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1062
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679446 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 9.132e-30
Identity = 66/109 (60.55%), Postives = 82/109 (75.23%), Query Frame = 3
Query:  150 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNFQHRKM*KTNLILSSWETERVILTRSQNHIYANGKGDK 476
            RPATF+EDFK  WS++H+RQ+E G+AIQLVLDQ++GCGFASKR+YLFGRVSMKIKL+PGDSAGTVTAFYMN     + +  L               Q +I+A+GKGD+
Sbjct:   31 RPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATV-RDELDFEFLGNRSGQPYSVQTNIFAHGKGDR 138          
BLAST of EY679446 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.938e-28
Identity = 66/115 (57.39%), Postives = 83/115 (72.17%), Query Frame = 3
Query:  150 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNFQHRKM*KTNLILSSWETERVILTRS------QNHIYANGKGDK 476
            RPA F +DF++ WSD H+ QI+GGRAIQL LD +SGCGFASK+QYLFGRVSMKIKL+PGDSAGTVTAFYMN        T+ +    + E  +  RS      Q +++A+GKGD+
Sbjct:   30 RPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSD------TDSVRDELDFE-FLGNRSGQPYTVQTNVFAHGKGDR 137          
BLAST of EY679446 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.928e-20
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  162 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMN 362
            F E F +TW +      E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++
Sbjct:   30 FYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLS 96          

HSP 2 Score: 42.3578 bits (98), Expect = 6.928e-20
Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 2
Query:  386 DELDFEFLGNRTGHPYTV 439
            DE+DFEFLGNRTGHPYT+
Sbjct:  103 DEIDFEFLGNRTGHPYTI 120          
BLAST of EY679446 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.109e-18
Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  159 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMN 362
            +F + F +TW        E G+ +   LD+ SG GF SK++YLFG++ MKIKLVPG+SAGTVTA+Y++
Sbjct:   26 SFYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLS 93          

HSP 2 Score: 34.2686 bits (77), Expect = 2.109e-18
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  386 DELDFEFLGNRTGHPYTV 439
            DE+DFEFLGN TG PY +
Sbjct:  100 DEIDFEFLGNVTGQPYVI 117          
BLAST of EY679446 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.239e-17
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 3
Query:  159 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYM 359
            +F ++F + WS+ H    + G    L LD ++GCGF +K  Y FG  SMK+KLV GDSAG VTA+YM
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYM 90          

HSP 2 Score: 37.7354 bits (86), Expect = 2.239e-17
Identity = 14/19 (73.68%), Postives = 17/19 (89.47%), Query Frame = 2
Query:  383 KDELDFEFLGNRTGHPYTV 439
            +DE+DFEFLGNRTG PY +
Sbjct:  100 RDEIDFEFLGNRTGQPYII 118          
BLAST of EY679446 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.240e-17
Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 3
Query:  156 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYM 359
            A F  D ++TW D   +    G  + L LD+ SG GF SK +YLFG++ M+IKLV G+SAGTVTA+Y+
Sbjct:   24 ANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYL 91          

HSP 2 Score: 36.965 bits (84), Expect = 2.240e-17
Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 2
Query:  356 YEFPTPKNVKDELDFEFLGNRTGHPYTV 439
            Y   +P +  DE+DFEFLGN +G PYT+
Sbjct:   89 YYLKSPGSTWDEIDFEFLGNLSGDPYTL 116          
BLAST of EY679446 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.158e-16
Identity = 44/111 (39.64%), Postives = 72/111 (64.86%), Query Frame = 3
Query:  162 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNFQHRKM*KTNL-ILSSWETERVILTRSQNHIYANGKGDK*KILY 491
            F ++++ +W+  H++ + GG  + LVLD++SG GF SK+ YLFG  SMK+KLV GDSAG VTAFY++  + +  + +   L +   +  IL   Q +++  GKGD+ + +Y
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRTGQPYIL---QTNVFTGGKGDREQRIY 139          
BLAST of EY679446 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.580e-16
Identity = 47/131 (35.88%), Postives = 76/131 (58.02%), Query Frame = 3
Query:  156 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNFQHRKM*KTNLILSSWETERVILTRSQNHIYANGKGDK*KILYPLVCTCCRLITFTLFFWKP 548
            + F ++F +TW D   +   GG  + L LDQ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++ Q     + +      ET +  +  +  +++A GKGD+ +  Y          T+++  W+P
Sbjct:   26 SNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGATHDEIDFEFLGNETGKPYVLHT--NVFAQGKGDREQQFYLWFDPTKNFHTYSI-VWRP 153          
BLAST of EY679446 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.747e-16
Identity = 45/111 (40.54%), Postives = 71/111 (63.96%), Query Frame = 3
Query:  162 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNFQHRKM*KTNL-ILSSWETERVILTRSQNHIYANGKGDK*KILY 491
            F +++  TW+  H+  + GGR +QL LD+ +G GF ++  YLFG  SM IKLV GDSAGTVTAFY++ Q+ +  + +   L +   +  IL   Q ++++ GKGD+ + +Y
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYIL---QTNVFSGGKGDREQRIY 139          
BLAST of EY679446 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.144e-15
Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 3
Query:  162 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMN 362
            F +DF VTWS  H+     GR+  L LDQ SG  F+S + +LFG++ MKIKL+ G S GTV A+YM+
Sbjct:   37 FNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMS 103          

HSP 2 Score: 32.7278 bits (73), Expect = 1.144e-15
Identity = 13/28 (46.43%), Postives = 18/28 (64.29%), Query Frame = 2
Query:  350 ILYEFPTPKNVKDELDFEFLGNRTGHPY 433
            + Y   + +  +DE+DFEFLGN  G PY
Sbjct:   98 VAYYMSSDQPNRDEIDFEFLGNVNGQPY 125          
The following BLAST results are available for this feature:
BLAST of EY679446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
XTH6_ARATH9.132e-3060.55Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH2.938e-2857.39Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH6.928e-2049.25Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH12_ARATH2.109e-1850.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH2.239e-1749.25Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH23_ARATH2.240e-1750.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC1.158e-1639.64Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH2.580e-1635.88Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT5.747e-1640.54Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH1.144e-1550.75Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-C07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679446 ID=EY679446; Name=EY679446; organism=Citrus sinensis; type=EST; length=1062bp
CCACAACATATAATTAAAGATCTCTTTCTAATTAGTAACAGATAATATTT
TATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGAAATGCAATAGC
ATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTTAGGGC
GACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCCGATGCCCAT
CTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTAGACCAAAA
TTCAGGATGTGGGTTTGCCTCCAAAAGGCAGTACTTGTTCGGGCGTGTAA
GCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCACTGCA
TTTTATATGAATTTCCAACACCGAAAAATGTGAAAGACGAACTTGATTTT
GAGTTCCTGGGAAACCGAACGGGTCATCCTTACACGGTCCCAAAACCATA
TCTATGCAAATGGAAAAGGCGATAAATAAAAAATATTGTACCCTCTGGTT
TGTACCTGCTGTAGATTAATCACCTTTACTCTATTCTTCTGGAAACCTCA
CCCATTTTGACCATCGAGATGGATAATGTGCCCTTATAGGGTTTACTCAT
ACTTAAGGAAGGGCTCCTTTTTCCAATTAAACTAATCCACGGGATGCTGT
ATTTAACCCCTCATAAGTAGCATAAAACATGGTCACTACAAAAACTTGAT
TCCAAATAAAATAAACAAGGAATAAAAAACATCATCTTTTTATAAACTTT
ATTAGAAAAACTATATAAATATAGGGGGAGATACTATGACATAATAGCCA
AACCTAATAAAGGGAATCTTTAAAACCAAAGTAAAACTTGCGTGGAAGGA
GGCATTAATACTATTAATAATATCCATCCCAATACATTAATCTCATACAT
AAAAAATATATTAAAATATAGTGTTAAAATAATCACATACTTTCACGCTT
GGATATAACTTAAGCAATTCATTTTCTCCAGATAGATTGCCCGAAAGCCA
CAATACAGAGATTACTGGTGTTCTATACTACTCTCCTCGCCCTCACGACC
CACTCAACACGG
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