EY679406

Overview
NameEY679406
Unique NameEY679406
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679406 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.639e-46
Identity = 92/144 (63.89%), Postives = 112/144 (77.78%), Query Frame = -1
Query:  229 PSFFGKPTVTAFWIPFSFDVWNPFQGXXXXXXXXSR-FPRETSAIVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPGMTLK 657
            PSFFG      F  PFS DVW+PF+         S  FPRE SA V+TR+DWKETPEAHVFK DLPG+ KE+VK+EIED RVLQI+ +R+VE+EDKN+ WHR+ERS GKF+RRFRLPEN K+DQV+A++E+GVLTVTVP   +K
Sbjct:    5 PSFFGGRRSNVF-DPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVK 147          
BLAST of EY679406 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.663e-45
Identity = 91/147 (61.90%), Postives = 112/147 (76.19%), Query Frame = -1
Query:  229 PSFFGKPTVTAFWIPFSFDVWNPFQGXXXXXXXXS----RFPRETSAIVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPGMTLK 657
            P+FFG      F  PFS DVW+PF+         S     F RE SA V+TR+DWKETPEAHVFK D+PGL KE+VK++IED +VLQI+ +RNVE+EDKN+TWHRVERS GKF+RRFRLPEN K++QV+AS+E+GVLTVTVP   +K
Sbjct:    5 PNFFGGRRNNVF-DPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVK 150          
BLAST of EY679406 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.784e-45
Identity = 91/143 (63.64%), Postives = 109/143 (76.22%), Query Frame = -1
Query:  229 PSFFGKPTVTAFWIPFSFDVWNPFQGXXXXXXXXSRFPRETSAIVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPGMTLK 657
            PSFFG    + F  PFS DVW+PF+              E SA V+TR+DWKETPEAHVFK D+PGL KE+VKLEI+D RVLQI+ +RNVE+EDKN+TWHRVERS GK +RRFRLPEN K+DQV+AS+E+GVLTVTVP   +K
Sbjct:    5 PSFFGGRRSSVF-DPFSLDVWDPFKDFPFPSS----LSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIK 142          
BLAST of EY679406 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.248e-45
Identity = 88/131 (67.18%), Postives = 106/131 (80.92%), Query Frame = -1
Query:  229 PFSFDVWNPFQGXXXXXXXXSR--FPRETSAIVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPGMTLK 615
            PFS DVW+PF+         S   FP+E SA V+TR+DWKETPEAHVFK DLPGL KE+VK+EIED RVLQI+ +RNVE+EDKN+ WHRVERS GKF+RRFRLPEN K+DQV+A++E+GVLTVTVP   +K
Sbjct:    2 PFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIK 132          
BLAST of EY679406 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.392e-44
Identity = 88/138 (63.77%), Postives = 107/138 (77.54%), Query Frame = -1
Query:  244 PSFFGKPTVTAFWIPFSFDVWNPFQGXXXXXXXXSRFPRETSAIVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVP 657
            P  FG    T+ + PFS DV++PF+              ETSA  NTR+DWKETPEAHVFK DLPGL KE+VK+E+E+ RVLQI+ +RNVE+EDKN+TWHRVERS GKF+RRFRLPEN K+DQV+AS+E+GVLTVTVP
Sbjct:    5 PRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSG----ETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVP 138          
BLAST of EY679406 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.392e-44
Identity = 92/146 (63.01%), Postives = 110/146 (75.34%), Query Frame = -1
Query:  223 PSFFGKPTVTAFWIPFSFDVWNPFQGXXXXXXXXSR-FPRETSAIVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPGMTLKIA 657
            PSFF       F  PFS DVW+P +         S  FPRE  A V+TR+DWKETPEAHVFK DLPGL KE+VK+E+ED RVLQI+ +R+VE+EDKN+ WHRVERS GKFLRRFRLPEN K+D+V+AS+E+GVLTVTVP   +K A
Sbjct:    5 PSFFSGRRSNVF-DPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKA 149          
BLAST of EY679406 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.050e-44
Identity = 85/143 (59.44%), Postives = 110/143 (76.92%), Query Frame = -1
Query:  229 PSFFGKPTVTAFWIPFSFDVWNPFQGXXXXXXXXSRFPRETSAIVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPGMTLK 657
            PSFFG      F  PFS DVW+PF+         S F +ET+A VNT +DWKETP+AHVFK DLPGL KE+VK+E+E+ +VLQI+ +RN E+E+KN+ WHRVERS GKFLRRFRLPEN K+D+V+A++ +GV+TVTVP + +K
Sbjct:    5 PSFFGGRRSNVF-DPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIK 146          
BLAST of EY679406 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.010e-43
Identity = 87/143 (60.84%), Postives = 107/143 (74.83%), Query Frame = -1
Query:  229 PSFFGKPTVTAFWIPFSFDVWNPFQGXXXXXXXXSRFPRETSAIVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPGMTLK 657
            PS FG      F  PFS DVW+PF+              E SA VNTR+DWKETPEAHVF+ D+PGL KE+VK++IED RVLQI+ +RN+E+EDKN+TWHRVERS G F+RRFRLPEN K++QV+AS+E+GVLTVTVP   +K
Sbjct:    5 PSIFGGRRSNVF-DPFSLDVWDPFKDFHFPTS----LSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVK 142          
BLAST of EY679406 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.428e-43
Identity = 88/143 (61.54%), Postives = 108/143 (75.52%), Query Frame = -1
Query:  229 PSFFGKPTVTAFWIPFSFDVWNPFQGXXXXXXXXSRFPRETSAIVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPGMTLK 657
            P FFG      F  PFS D+W+PF+         S    E SA V+TR+DWKETPEAHVFK D+PGL KE+VK++IED RVLQI+ +RNVE+EDKN+TWHRVERS GKF RRFRLPEN K+++V+AS+E+GVLTVTVP   +K
Sbjct:    5 PGFFGGRRSNVF-DPFSLDMWDPFKDFHVPTSSVSA---ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVK 143          
BLAST of EY679406 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.848e-43
Identity = 88/145 (60.69%), Postives = 109/145 (75.17%), Query Frame = -1
Query:  223 PSFFGKPTVTAFWIPFSFDVWNPFQGXXXXXXXXSRFPRETSAIVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPGMTLKIA 657
            PSFF     +  + PFS DVW+PF+         S   RE SAIVN R+DW+ETPEAHVFK DLPGL KE+VK+EIE+  VL+I+ +R+VE+EDKN+TWHRVERS G+F RRFRLPEN K+DQV+A++E+GVLTVTVP    K A
Sbjct:    5 PSFFNNNRRSNIFDPFSLDVWDPFK-----ELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKA 144          
The following BLAST results are available for this feature:
BLAST of EY679406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
HSP12_MEDSA9.639e-4663.8918.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP16_SOYBN3.663e-4561.9018.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOYBN4.784e-4563.6417.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_MEDSA6.248e-4567.1818.1 kDa class I heat shock protein (Fragment) OS=... [more]
HSP12_SOLPE1.392e-4463.7717.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_PEA1.392e-4463.0118.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP11_DAUCA4.050e-4459.4417.8 kDa class I heat shock protein OS=Daucus caro... [more]
HSP13_SOYBN2.010e-4360.8417.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP14_SOYBN3.428e-4361.5417.5 kDa class I heat shock protein OS=Glycine max... [more]
HS17B_ARATH5.848e-4360.6917.6 kDa class I heat shock protein 2 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-H02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679406 ID=EY679406; Name=EY679406; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGATTGGCACATCGGTGAATTCAACTGAAAGAGACTTGTGG
ACTCAATATGTATGCAAGGCTTGTGGAGACAAGGTTCTTAGAGGTGCATA
CGAGTGGGAGCAGCACAAACAGGGTCGCAGGCATCGAAAGCGAATTTATA
ATCTTAGGAAGTCTCAGAGATTCAGCTCAGCAGGTCAGCAGCATCAACAG
CAAAATACTTCTGTAGCTACAGAGCAATCTTCAATGTCATGCCAGGAACT
GTAACAGTAAGAACTCCATCCTCAATAGAAGCCCTAACCTGATCAATCTT
CCCATTCTCCGGCAACCTGAACCTCCTCAAGAACTTGCCTCTGCTGCGCT
CTACACGATGCCATGTCTCATTCTTGTCTTCCCTCTCAACATTCCTGTCT
GCTGTTATCTGAAGCACCCTGTGGTCTTCAATCTCGAGCTTCACGTCCTC
TTTCGTGAGACCTGGAAGATCCACCTTGAATACGTGAGCTTCTGGGGTTT
CCTTCCAGTCCATGCGAGTGTTAACAATAGCTGAAGTTTCTCGAGGGAAT
CGAGAGGAAAGTGAGGGGGAAAGCAAAAGTCCTTGGAACGGGTTCCAAAC
ATCGAAAGAGAAGGGGATCCAAAATGCTGTCACGGTGGGTTTACCGAAGA
AGCTTGGGAATCCTCCGCCCATTTTTTTTCTGGAAAAATGCTTACAGAAT
GGAAGGGTTTGAAACTAAAATTGGTTGGCGTGAAATGGGGTATTGGGAAA
ATGGCGGTTTGTTATTGGATTGGATGCCAAGGGCCGGGGTTTTTATAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGCCGGCCCTAAAAGGAT
CCCAGTTTTAACTTACCGGGGGGCAGGGAAACATCTAAACCTTTTTTAAA
TATGGCCCCCTAAAATTTTAA
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