EY744661

Overview
NameEY744661
Unique NameEY744661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744661 vs. ExPASy Swiss-Prot
Match: FB37_ARATH (F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.399e-28
Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 2
Query:  101 MGQSASTAAISSRREFNHSQRYKSKSTAVISPMHADESSAELPDGTAYDYISNLPDECLACIFQSLSSGDRKRCSLVCRRWLRIEGQSRHRLSLNAQSELLPMIPLSF 424
            MGQS S A  S         R +SKS  +  P+ + ES    PD     Y S+LPDECLA +FQ L+SG+RKRC+LVCRRW+ +EGQ+R+RLSL+A+S+L+  IP  F
Sbjct:    1 MGQSTSAAGNSILN------RRRSKSFTLKFPIESIESEISQPD-----YTSSLPDECLALVFQFLNSGNRKRCALVCRRWMIVEGQNRYRLSLHARSDLITSIPSLF 97          

HSP 2 Score: 49.6766 bits (117), Expect = 2.399e-28
Identity = 33/72 (45.83%), Postives = 38/72 (52.78%), Query Frame = 3
Query:  429 RFDVVTKLALKCDRRSRERWGRRAYFNFSKVAATSRGLKLPPCPELTDPEMVVFC*KLQRPLEKLSCGICPF 644
            RFD VTKL+LKCDRRS    G  A    S      + LKL  C ELTD  M  F  +  + L+  SCG C F
Sbjct:   99 RFDSVTKLSLKCDRRS-VSIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFA-ENCKDLKIFSCGSCDF 168          
BLAST of EY744661 vs. ExPASy Swiss-Prot
Match: FBL16_ARATH (F-box/LRR-repeat protein 16 OS=Arabidopsis thaliana GN=FBL16 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.066e-28
Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 2
Query:  101 MGQSASTAAISSRREFNHSQRYKSKSTAVISPMHADESSAELPDGTAYDYISNLPDECLACIFQSLSSGDRKRCSLVCRRWLRIEGQSRHRLSLNAQSELLPMIPLSF 424
            MGQ+ S+ A  + R+          S  + SP   D  S    DG  YD+ +NLPD+CLA IFQ LS+GDRKRCSLV +RWL ++GQ+RHRLSL+A+SE+LP +P  F
Sbjct:    1 MGQAPSSPAEPNVRD---------TSLCLWSPEFLDCESIGFEDGD-YDFTANLPDDCLAHIFQFLSAGDRKRCSLVSKRWLLVDGQNRHRLSLDAKSEILPFLPCIF 98          

HSP 2 Score: 47.7506 bits (112), Expect = 4.066e-28
Identity = 33/72 (45.83%), Postives = 39/72 (54.17%), Query Frame = 3
Query:  429 RFDVVTKLALKCDRRSRERWGRRAYFNFSKVAATSRGLKLPPCPELTDPEMVVFC*KLQRPLEKLSCGICPF 644
            RFD VTKLAL+CDRRS       A F  S   +    +KL  C E+TD  M  F  +  + L KLSCG C F
Sbjct:  100 RFDSVTKLALRCDRRSFS-LSDEALFIVSIRCSNLIRVKLRGCREITDLGMESFA-RNCKSLRKLSCGSCTF 169          
BLAST of EY744661 vs. ExPASy Swiss-Prot
Match: FBL8_ARATH (Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana GN=FBL8 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.252e-26
Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query:  137 RREFNHSQRYKSKSTAVISP----MHADESSAELPDGTAYDYISNLPDECLACIFQSLSSGDRKRCSLVCRRWLRIEGQSRHRLSLNAQSELLPMIPLSF 424
            RR    + +++   T   SP    +    S A+ P    YDYISNLPDECL+ IFQSL+  D KRCSLVCRRWL IEGQ RHRLSL AQS+L+ +IP  F
Sbjct:   36 RRMGQSTSKFRRSKTTFTSPVLPNLREQNSGADEP----YDYISNLPDECLSLIFQSLTCADLKRCSLVCRRWLTIEGQCRHRLSLKAQSDLISVIPSLF 131          

HSP 2 Score: 39.2762 bits (90), Expect = 1.252e-26
Identity = 29/72 (40.28%), Postives = 38/72 (52.78%), Query Frame = 3
Query:  429 RFDVVTKLALKCDRRSRERWGRRAYFNFSKVAATSRGLKLPPCPELTDPEMVVFC*KLQRPLEKLSCGICPF 644
            RFD VTKL L+ DRRS       A+   S        LKL  CPE++D  ++ F  +  R L+K+S G C F
Sbjct:  133 RFDSVTKLVLRSDRRSLGICD-NAFVMISVRCRNLTRLKLRGCPEISDLGIIGFT-ENCRSLKKVSFGSCGF 202          
BLAST of EY744661 vs. ExPASy Swiss-Prot
Match: SKIP2_ARATH (F-box protein SKIP2 OS=Arabidopsis thaliana GN=SKIP2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.786e-22
Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = 2
Query:  101 MGQSASTAAISSRREFNHSQRYKSKSTAVISPMHADESSAELPDGTAYDYISNLPDECLACIFQSLSSGDRKRCSLVCRRWLRIEGQSRHRLSLNAQSELLPMIPLSF 424
            MGQ+ S+ A S+ RE +     +  S  ++    A   S  + +    D+  +LPDECLA +FQ L +GDRKRCSLVC+RWL ++GQSRHRLSL+A+ E+   +   F
Sbjct:    1 MGQAPSSTAESNGRELD----LRLWSPVIV----AGGESMAVGNVVDRDFTGDLPDECLAHVFQFLGAGDRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTSMF 100          

HSP 2 Score: 41.2022 bits (95), Expect = 2.786e-22
Identity = 31/72 (43.06%), Postives = 37/72 (51.39%), Query Frame = 3
Query:  429 RFDVVTKLALKCDRRSRERWGRRAYFNFSKVAATSRGLKLPPCPELTDPEMVVFC*KLQRPLEKLSCGICPF 644
            RFD VTKLAL+CDR+S       A    S        +KL  C E+TD  M  F  K  + L+KLS G C F
Sbjct:  102 RFDSVTKLALRCDRKS-VSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFA-KNCKNLKKLSVGSCNF 171          
The following BLAST results are available for this feature:
BLAST of EY744661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
FB37_ARATH2.399e-2850.00F-box protein At1g47056 OS=Arabidopsis thaliana GN... [more]
FBL16_ARATH4.066e-2850.00F-box/LRR-repeat protein 16 OS=Arabidopsis thalian... [more]
FBL8_ARATH1.252e-2654.00Putative F-box/LRR-repeat protein 8 OS=Arabidopsis... [more]
SKIP2_ARATH2.786e-2243.52F-box protein SKIP2 OS=Arabidopsis thaliana GN=SKI... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-B01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744661 ID=EY744661; Name=EY744661; organism=Citrus sinensis; type=EST; length=864bp
CGGACGCGTGGGCTTAGCACAAAGTTTTTTTCTACCGTGGTGCCTAGGAT
AATAGTCCTGAGGCCAAATCTCAATCGTTGATTCTTCAACTTCGCCGTGG
ATGGGCCAGTCAGCTTCGACGGCCGCAATCTCAAGCCGCCGAGAATTTAA
CCACAGCCAACGATACAAGTCCAAATCGACGGCTGTGATCTCTCCAATGC
ATGCTGACGAAAGTAGCGCCGAACTTCCCGATGGAACAGCCTATGATTAC
ATCTCGAACCTGCCCGACGAGTGCTTGGCTTGCATTTTCCAGTCTCTTAG
CTCCGGTGACCGCAAAAGGTGCTCTCTCGTTTGTCGTCGTTGGCTCAGGA
TCGAGGGGCAGAGCCGTCACCGTCTTTCTCTCAACGCCCAGTCAGAACTC
CTCCCTATGATTCCCCTCTCTTTTCTCCCGATTCGACGTCGTCACGAAAC
TCGCTCTCAAATGTGACCGTAGATCCCGTGAGCGGTGGGGACGACGCGCT
TATTTTAATTTCTCAAAAGTGGCCGCAACCTCACGCGGGCTGAAACTCCC
CCCTTGTCCTGAGCTGACGGACCCCGAAATGGTCGTGTTCTGCTAAAAAC
TGCAAAGGCCTTTGGAGAAGCTCTCCTGTGGGATTTGCCCTTTTTGGAGC
CAAAGGCTTGAAACCCGAGGGTCAAAAACCTGGCCCAACTCTCAGAAAAG
TAATCGGTAAACTGGTTTATCGGAAAACGAACAAAGGAGACCCGCGGACT
GAACCCCAATGGACCCTGCCGAGGGCTGCCCCTTCCCATTAAAAACTTCT
TGGCCTAAAGGGGGAAATTTACCACGGGGAAAAGGGGGCTGGGGCCCCCC
CAAAAAAACCCGGT
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