EY744629

Overview
NameEY744629
Unique NameEY744629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length977
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744629_ssr320 microsatellite EY744629_ssr320:320..334. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY744629 vs. ExPASy Swiss-Prot
Match: WRK21_ARATH (Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.599e-33
Identity = 111/297 (37.37%), Postives = 141/297 (47.47%), Query Frame = 2
Query:   14 GHARVRKLRKLPNPVNQSIFLENPHHKT-EIPSKNLQ---FLQSSFHDNPVQEMGSLAKSSLTLGNPSLELISNGKQHL-QLGQQTPSTS-----------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKMFRKSNSGVSLNFDSSSCTPTMSSNRSFISSLSMDGSVANLDGSAFHLIGAPRSSDQSSQQHKRKCSGKG-EDGSVKCGXXXXXXXXXXXXXXXXXSIQGTWLSATSLKKSPPKEYSWRKYGAKANQGVLPLPRGKPKRVTTRKGVAPPRK 817
            GHAR R+ +KL + V+QS+ L+    +T E+PS + Q    L+S F +  +++       SLTLG  S  L SN K  L QL QQT   S                                                     AE M RK N G+SL+FD+SSCTPTMSS RSF+SSLS+DGSVAN++G      G P S+DQ+S   KRKC  KG E GS+KCG                 SI+   +S   +   PP +YSWRKYG K  +G  P PRG  K  + R    P RK
Sbjct:   60 GHARFRRAKKLQSHVSQSLLLDPCQQRTTEVPSSSSQKTPVLRSGFQELSLRQ----PSDSLTLGTRSFSLNSNAKAPLLQLNQQTMPPSNYPTLFPVQQQQQQQQQQQQQEQQQQQQQQQQQFHERLQAHHLHQQQQLQKHQAELMLRKCNGGISLSFDNSSCTPTMSSTRSFVSSLSIDGSVANIEGKNSFHFGVPSSTDQNSLHSKRKCPLKGDEHGSLKCGSSSRCHCAKKRKHRVRRSIRVPAIS-NKVADIPPDDYSWRKYGQKPIKG-SPYPRGYYKCSSMRG--CPARK 348          
BLAST of EY744629 vs. ExPASy Swiss-Prot
Match: WRK74_ARATH (Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.179e-18
Identity = 66/156 (42.31%), Postives = 88/156 (56.41%), Query Frame = 2
Query:  368 MFRKSNSGVSLNFDSS---SC-TPTMSS-NRSFISSLSMDGSVANLDGSAFHLIGAPRSSDQSSQQHKR-KCSGKGEDGSVKCGXXXXXXXXXXXXXXXXXSIQGTWLSATSLKKSPPKEYSWRKYGAKANQGVLPLPRGKPKRVTTRKGVAPPRK 817
            ++ +S SG++L FD S   SC +P++S+ +RSF+SSLSMDGSV + D ++FHLIG P+ SD  SQ  +R  CS     GS+KCG                 SI+   +S   +   PP EYSWRKYG K  +G  P PRG  K  + R    P RK
Sbjct:  151 VYSRSKSGLNLKFDGSIGASCYSPSISNGSRSFVSSLSMDGSVTDYDRNSFHLIGLPQGSDHISQHSRRTSCS-----GSLKCGSKSKCHCSKKRKLRVKRSIKVPAIS-NKIADIPPDEYSWRKYGQKPIKG-SPHPRGYYKCSSVRG--CPARK 297          
BLAST of EY744629 vs. ExPASy Swiss-Prot
Match: WRK39_ARATH (Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.128e-18
Identity = 69/154 (44.81%), Postives = 86/154 (55.84%), Query Frame = 2
Query:  371 FRKSNSGVSLNFDSS--SC-TPTMSS-NRSFISSLSMDGSVANLDGSAFHLIGAPRSSDQSSQQHKRK-CSGKGEDGSVKCGXXXXXXXXXXXXXXXXXSIQGTWLSATSLKKSPPKEYSWRKYGAKANQGVLPLPRGKPKRVTTRKGVAPPRK 817
            + +SNSGV+L FD S  SC TP++S+ +RSF+SSLSMD SV + D ++FHL G  R SD   QQH RK CS     GS+KCG                 SI+   +S   +   PP EYSWRKYG K  +G  P PRG  K  + R    P RK
Sbjct:  156 YSRSNSGVNLKFDGSGSSCYTPSVSNGSRSFVSSLSMDASVTDYDRNSFHLTGLSRGSD---QQHTRKMCS-----GSLKCGSRSKCHCSKKRKLRVKRSIKVPAIS-NKIADIPPDEYSWRKYGQKPIKG-SPHPRGYYKCSSVRG--CPARK 297          
BLAST of EY744629 vs. ExPASy Swiss-Prot
Match: WRKY1_MAIZE (Protein WRKY1 OS=Zea mays PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.391e-13
Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 2
Query:  389 GVSLNFDSSSCTPTMSSNRSFISSLSMDGSVANLDGS----AFHLIGAPR--SSDQSSQQHKRKCSGKGEDGSVKCGXXXXXXXXXXXXXXXXXSIQGTWLSATSLKKSPPKEYSWRKYGAKANQGVLPLPRGKPKRVTTRKGVAPPRK 817
            GV+L FDSS+CT   SS+RSF+SSLSM+GS+A+LDGS     F L+   +  S+ +     +R+C+G+ EDG+ +C                  SI+   +S   +   P  E+SWRKYG K  +G  P PRG  K  + R    P RK
Sbjct:  226 GVNLKFDSSNCTA--SSSRSFLSSLSMEGSLASLDGSRTSRPFQLLSGSQTASTPELGLVQRRRCAGR-EDGTGRCATGSRCHCSKKRKLRIRRSIKVPAIS-NKVADIPADEFSWRKYGQKPIKG-SPHPRGYYKCSSVRG--CPARK 367          
The following BLAST results are available for this feature:
BLAST of EY744629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
WRK21_ARATH4.599e-3337.37Probable WRKY transcription factor 21 OS=Arabidops... [more]
WRK74_ARATH4.179e-1842.31Probable WRKY transcription factor 74 OS=Arabidops... [more]
WRK39_ARATH7.128e-1844.81Probable WRKY transcription factor 39 OS=Arabidops... [more]
WRKY1_MAIZE1.391e-1338.93Protein WRKY1 OS=Zea mays PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-002-G03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744629 ID=EY744629; Name=EY744629; organism=Citrus sinensis; type=EST; length=977bp
CAACAATGGGTCGGGTCATGCAAGAGTGAGAAAGCTCAGGAAGTTACCAA
ATCCTGTTAACCAATCCATCTTCTTAGAGAATCCTCACCATAAAACAGAA
ATTCCTTCCAAGAATCTGCAATTTCTCCAATCTAGTTTTCATGATAACCC
TGTTCAAGAAATGGGATCGCTTGCTAAAAGTTCGTTAACTCTGGGCAACC
CATCTTTGGAGTTGATCTCAAATGGGAAACAGCATCTACAACTTGGTCAG
CAAACTCCTTCAACTTCAGCACACTATCATTTCCTCCAGCAACAGCAGCT
ACAACAGAGGTTGCTCCACCAGCAGCAGCAGCAGCAACAGCATCATATGA
AACTTCAAGCTGAAAAGATGTTTAGAAAGAGCAATAGTGGGGTTAGCCTT
AATTTTGATAGCTCTAGCTGCACACCTACAATGTCATCCAACAGGTCTTT
CATTTCTTCCTTGAGTATGGATGGTAGTGTGGCTAATTTGGATGGAAGTG
CCTTCCATTTGATTGGGGCACCTCGTTCTTCAGATCAGAGTTCACAACAG
CACAAGAGGAAGTGCTCTGGAAAGGGGGAAGATGGGAGTGTGAAATGTGG
AAGCAGGGGTAAATGGCACTGCTCCAAGAAAAAGAAGCATAGGGGGAAAA
AGTCAATCCAGGGTACCTGGCTATCAGCAACAAGCTTGAAAAAATCCCCT
CCCAAGGAATATTCTTGGAGGAAGTATGGGGCGAAAGCCAATCAAGGGGT
TCTCCCCCTCCCAAGGGGAAAACCAAAAAGGGTAACCACAAGGAAAGGGG
TGGCCCCGCCCAGAAAAACACTGGGGGGAGCGGGGGTTGGGAAAAAAAAC
CCACCCCTGGTTTTTTTGGTTTTCTTACGAGAGGGGCGAAACTTAACCCC
CCCCCCGGGGGGTTACCAACCCCACAAGCCCCCCAAACACCCCACAATTA
AAACTTTTTGTGGGGGGAAGAAATGCC
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