EY679032
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679032 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 3.035e-81 Identity = 131/179 (73.18%), Postives = 152/179 (84.92%), Query Frame = 1 Query: 4 MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEIFVPKQKTAIGWNAKYLTNPIGRI 540 MGAGGRM VP++ K ++D KRVPC KPPF++ +KKAIPPHCF+RS+ RSFSY++ D+ IA FYY+A Y LP PLSYLAWP+YWA QGC+LTG+WV+AHECGHHAFSDYQWLDDTVGLI HS LLVPYFSWKYSHRRHHSNTGSL+RDE+FVPKQK+AI W KYL NP+GRI Sbjct: 1 MGAGGRMPVPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRI 179
BLAST of EY679032 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 9.762e-80 Identity = 129/178 (72.47%), Postives = 151/178 (84.83%), Query Frame = 1 Query: 4 MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEIFVPKQKTAIGWNAKYLTNPIGR 537 MGAGGRM V +P K ++D LKRVPC PPFT+ ++KKAIPPHCF+RS+ RSFSY++ D+ +A FYY+A TY LPHPLSY+AWP+YWA QG +LTGVWV+AHECGHHAFSDYQWLDDTVGLI HS LLVPYFSWKYSHRRHHSNTGSL+RDE+FVPK+K+ I W KYL NP+GR Sbjct: 1 MGAGGRMQVSPSPKKSETDTLKRVPCETPPFTVGELKKAIPPHCFKRSIPRSFSYLIWDIIVASCFYYVATTYFPLLPHPLSYVAWPLYWACQGVVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGR 178
BLAST of EY679032 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 1.079e-78 Identity = 135/181 (74.59%), Postives = 150/181 (82.87%), Query Frame = 1 Query: 4 MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEIFVPKQKTAIGWNAKYLTNPIGRIQT 546 MGAGGR VP K + DPLKRVP KP F+LSQ+KKAIPPHCF+RSVLRSFSYVV+DLTIAF YY+A Y H LP PLS+ +YWA+QGCILTGVWV+AHECGHHAFSDYQ LDD VGLILHS LLVPYFSWKYSHRRHHSNTGSL+RDE+FVPKQK+ I W +KYL NP GR+ T Sbjct: 1 MGAGGRTDVPPANRKSEVDPLKRVPFEKPQFSLSQIKKAIPPHCFQRSVLRSFSYVVYDLTIAFCLYYVATHYFHLLPGPLSFRGMAIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLT 181
BLAST of EY679032 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 3.972e-73 Identity = 125/179 (69.83%), Postives = 144/179 (80.45%), Query Frame = 1 Query: 1 TMGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEIFVPKQKTAIGWNAKYLTNPIGR 537 TMG GR+A K PL RVP +KPPFT+ Q+KKAIPPHCF+RS+L SFSYVV+DL+ AF+FY IA TY H LP P S +AWP+YW LQGC+LTGVWV+AHECGHHAFS YQW+DD VGL LHS LLVPYFSWK SHRRHHSNTGSLDRDE+FVPK K+ + W +KYL NP+GR Sbjct: 8 TMGGRGRVAKVEVQGK---KPLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSFSYVVYDLSFAFIFY-IATTYFHLLPQPFSLIAWPIYWVLQGCLLTGVWVIAHECGHHAFSKYQWVDDVVGLTLHSTLLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWFSKYLNNPLGR 182
BLAST of EY679032 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 9.179e-62 Identity = 106/179 (59.22%), Postives = 132/179 (73.74%), Query Frame = 1 Query: 4 MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEIFVPKQKTAIGWNAKYLTNPIGRI 540 MG GGR P+ ++RV PPFT+S +K+AIPPHCF+RSV+RS Y+VHD IA++FY++AD YI LP PL+YLAWP+YW Q ILTG+WV+ HECGHHAFSDYQW+DDTVG ILHS L+ PYFSWKYSHR HH+NT SLD DE+++PK K + K L +P GR+ Sbjct: 1 MGGGGRGRTSQKPL------MERVSVD-PPFTVSDLKQAIPPHCFKRSVIRSSYYIVHDAIIAYIFYFLADKYIPILPAPLAYLAWPLYWFCQASILTGLWVIGHECGHHAFSDYQWVDDTVGFILHSFLMTPYFSWKYSHRNHHANTNSLDNDEVYIPKSKAKVALYYKVLNHPPGRL 172
BLAST of EY679032 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.177e-38 Identity = 71/139 (51.08%), Postives = 99/139 (71.22%), Query Frame = 1 Query: 88 PPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL-SYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEIFVPKQKTAIG 501 P FT+ ++++ IP HCFERS LR +V DLT A + + +A T I + +PL YLAWP YW +QG + TG+WV+AHECGH +FS + L++TVG ILHS LLVPY SW+ SH +HH TG + +D++FVPK ++ +G Sbjct: 36 PEFTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLF-LAATQIDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVG 173
BLAST of EY679032 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 3.177e-38 Identity = 71/139 (51.08%), Postives = 99/139 (71.22%), Query Frame = 1 Query: 88 PPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL-SYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEIFVPKQKTAIG 501 P FT+ ++++ IP HCFERS LR +V DLT A + + +A T I + +PL YLAWP YW +QG + TG+WV+AHECGH +FS + L++TVG ILHS LLVPY SW+ SH +HH TG + +D++FVPK ++ +G Sbjct: 36 PEFTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLF-LAATQIDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVG 173
BLAST of EY679032 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.438e-30 Identity = 63/151 (41.72%), Postives = 94/151 (62.25%), Query Frame = 1 Query: 76 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEIFVP---KQKTAIGWNAKYL 519 P + PPF L++++ IP HC+ + LRS SYVV D+ IA H S+L +P+YWA+QG + ++V+ H+CGH +FSD Q L++ VG ILHS +LVPY W+ SH+ HH N G+++ DE +VP K +G++ K+L Sbjct: 24 PSAPPPFRLAEIRNVIPKHCWVKDPLRSLSYVVRDVIFVATLIGIAI-------HLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVGHILHSAILVPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFL 167
BLAST of EY679032 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.438e-30 Identity = 62/135 (45.93%), Postives = 85/135 (62.96%), Query Frame = 1 Query: 76 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEIFVP 480 P ++PPF + ++ AIP HC+ +S LRS SYVV D+ IA IA Y+ S+ WP+YWA QG + ++V+ H+CGH +FSD L+ VG ILHS +LVPY W+ SHR HH N G ++ DE +VP Sbjct: 28 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDI-IAVAALAIAAVYVD------SWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVP 155
BLAST of EY679032 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.980e-28 Identity = 58/135 (42.96%), Postives = 81/135 (60.00%), Query Frame = 1 Query: 76 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEIFVP 480 P ++PPF + ++ AIP HC+ +S LRS SYV D+ A +A Y S+ WP+YW QG + ++V+ H+CGH +FSD L+ VG ILHS +LVPY W+ SHR HH N G ++ DE +VP Sbjct: 25 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVTRDI-FAVAALAMAAVYFD------SWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVP 152 The following BLAST results are available for this feature:
BLAST of EY679032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679032 ID=EY679032; Name=EY679032; organism=Citrus sinensis; type=EST; length=893bpback to top |