EY744595

Overview
NameEY744595
Unique NameEY744595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744595 vs. ExPASy Swiss-Prot
Match: FBL42_ARATH (F-box/LRR-repeat protein At3g03360 OS=Arabidopsis thaliana GN=At3g03360 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.113e-12
Identity = 61/216 (28.24%), Postives = 101/216 (46.76%), Query Frame = 1
Query:   73 DDILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDFDGITKSSNCISDPTCIDKVLRLHRGSSINKFRL-------CLYSKDLHESEITNWVYSALSKRVQIFELELWPRLKNYTFLENCYNNLKSELSGVEY-------------------LRSLLLFSVNVAEEILELILHNCPLLDQLYVVRSETL------GSVRLLVLQSN*KHLRMYP 624
            DDIL  I+S LP + A KTSVLS RW+++W+ T  L F           D  CI+++L  +R   +  FR+       C+   D H ++I +W+  A+S+ V+   L L+     Y   E  Y N   +   +++                   L++L L+  N+++E + +IL  CP+L+ L +   + L       S RL+ L+   +  RM P
Sbjct:   44 DDILQLILSYLPTRLAIKTSVLSRRWRHVWSDTWSLSF------HRDRPDAPCINRILDRYRAPKMMSFRICSCCRAACISRPDTH-ADIDSWINFAMSRNVE--NLSLYLDEDKYDIPEFLYINSSLKQLYLDFGCKKDFISLNPKCSVSWTSLKNLSLYHCNISDESIAIILSGCPILESLLLFFCKKLKVLDLSKSPRLITLEIT-RRCRMEP 249          
BLAST of EY744595 vs. ExPASy Swiss-Prot
Match: FB226_ARATH (F-box protein At4g09920 OS=Arabidopsis thaliana GN=At4g09920 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.936e-12
Identity = 58/203 (28.57%), Postives = 94/203 (46.31%), Query Frame = 1
Query:   73 DDILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDFDGITKSSNCISDPTC-IDKVLRLHRGSSINKFRLCLYSKDLHESEITNWVYSALSKRVQIFELELWP---------------RLKNYTFLE------------NCYNNLKS-ELSGVEYLRSLLLFSVNVAEEILELILHNCPLLDQLYV--VRSETLGSVRLLV 588
            D++L+ I+S +P K A  TS+LS RW++LW + T L F     S +      C +D+ L LHR   I  FRL L        +I  WV  A+S+ ++  EL+++                  K+   L+             C  +LK+ EL GV Y +          +  L+ +L NCP+L+ L+V  +R + +G   ++V
Sbjct:    9 DEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIR--ELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFK----------QGSLQRLLCNCPVLEDLFVLLLRCDDIGMFIVIV 199          
BLAST of EY744595 vs. ExPASy Swiss-Prot
Match: FB228_ARATH (F-box protein At4g10400 OS=Arabidopsis thaliana GN=At4g10400 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 58/203 (28.57%), Postives = 93/203 (45.81%), Query Frame = 1
Query:   73 DDILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDFDGITKSSNCISDPTC-IDKVLRLHRGSSINKFRLCLYSKDLHESEITNWVYSALSKRVQIFELELWP---------------RLKNYTFLE------------NCYNNLKS-ELSGVEYLRSLLLFSVNVAEEILELILHNCPLLDQLYVVRS--ETLGSVRLLV 588
            D++L+ I+S +P K A  TS+LS RW++LW + T L F     S +      C +D+ L LHR   I  FRL L        +I  WV  A+S+ ++  EL+++                  K+   L+             C  +LK+ EL GV Y +          +  L+ +L NCP+L+ L V  S  + +G + ++V
Sbjct:    9 DEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIR--ELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFK----------QGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIV 199          
BLAST of EY744595 vs. ExPASy Swiss-Prot
Match: FBL64_ARATH (F-box/LRR-repeat protein At3g59200 OS=Arabidopsis thaliana GN=At3g59200 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 56/182 (30.77%), Postives = 94/182 (51.65%), Query Frame = 1
Query:   79 ILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDF------DGITKSSNCISDP--TCIDKVLRLHRGSSINKFRLCLYSKDLHESEITNWVYSALSKRVQIFELEL--WPRLKNYTFLENCYNNLK----SELS--------GVEYLRSLLLFSVNVAEEILELI--LHNCPLLDQLYVV 552
            ++ +I+S LP KEAA TSVLS +W+YL+ + T LDF      DG  KS   +S      +D+VL L    S+NKF L   + D+  + +T W+ + L + V   +L +  +P L +  F+      LK    ++L+         +  L++L +  V+V E     +  L  CP+L++L ++
Sbjct:   16 VVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSDVELSRSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILNVLGRGVSELDLSILEYP-LPSEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCVDVQERGFGFVKLLSGCPVLEELVLM 196          
BLAST of EY744595 vs. ExPASy Swiss-Prot
Match: FDL1_ARATH (F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana GN=At1g13570 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 54/173 (31.21%), Postives = 83/173 (47.98%), Query Frame = 1
Query:   79 ILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDFDG---ITKSSNCISDPTC---IDKVLRLHRGSSINKFRLCLYSKDLHESEITNWVYSALSKRVQIFELELWP----------RLKNYTFLENCYNNL--KSELSGVEYLRSLLLFSVNVAEEILELILHNCPLLDQL 543
            I+ NI++RL +++A +TSVLSS+W+Y W+  T L FD       +  C+ +      I  VL LH+G  I+KF+L    K     +I  W+       ++   L+L                 T LE C+          G  YL+SL L  + VA E++E ++  CPLL+ L
Sbjct:   15 IIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEKCVSPSNDRCVVETNLVRFITGVLLLHQG-PIHKFQLSTSFKQC-RPDIDQWLLFLSRNGIKELVLKLGEGEFRVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYLKSLNLHQILVAPEVIESLISGCPLLEFL 185          
The following BLAST results are available for this feature:
BLAST of EY744595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FBL42_ARATH3.113e-1228.24F-box/LRR-repeat protein At3g03360 OS=Arabidopsis ... [more]
FB226_ARATH6.936e-1228.57F-box protein At4g09920 OS=Arabidopsis thaliana GN... [more]
FB228_ARATH2.018e-1128.57F-box protein At4g10400 OS=Arabidopsis thaliana GN... [more]
FBL64_ARATH3.442e-1130.77F-box/LRR-repeat protein At3g59200 OS=Arabidopsis ... [more]
FDL1_ARATH5.872e-1131.21F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-002-D02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744595 ID=EY744595; Name=EY744595; organism=Citrus sinensis; type=EST; length=919bp
GACCGCGAATTACCCCTGCTACTCGTGAAGTGAAGGGCGAAATTGTAGAG
GATTTGATGAGTCTACTCCCATGATGATATTCTTATCAATATTATCTCTC
GATTGCCACTTAAGGAAGCTGCAAAGACTTCTGTTCTTTCCAGTAGATGG
AAATATTTGTGGACTTTTACCACTGTTCTTGACTTTGATGGAATAACAAA
ATCTTCTAACTGTATAAGTGATCCAACTTGTATTGATAAAGTCTTACGAC
TGCATAGAGGTTCAAGTATAAATAAGTTTAGATTATGTTTGTATTCTAAG
GACTTACATGAAAGTGAAATCACCAATTGGGTTTACTCGGCATTATCAAA
AAGGGTTCAAATCTTTGAGTTGGAGTTGTGGCCAAGGCTTAAGAATTACA
CATTTCTGGAAAACTGTTATAACAACCTTAAAAGTGAGTTATCTGGCGTC
GAGTATTTAAGATCCCTTCTCCTTTTTAGCGTGAATGTCGCTGAAGAAAT
TCTTGAGTTGATATTACATAACTGTCCGCTTCTTGATCAATTATATGTTG
TCCGCTCTGAAACTCTGGGTAGCGTAAGGTTGTTGGTACTGCAATCCAAT
TGAAAACACTTACGAATGTACCCTTTGCTTACAGATTGAACGAAAATCAA
AAATTCCCACCCCTTATCTTTTTGGGCTTTCAAATATTTTGGACGCAGAA
AAAAAATTAAATTCCATTAAGAAAAGGCTCCCCCGGCTGGGGGAAAATAT
TCTTTCCCGGGGGGGTAAAGCCAAACCCCAATCAAGGAAAGGTAGTTCGG
CCCAAATTTAAAGGTGTTTTTTCCCAAAATAAAAAAATCTTTGGTTTGTG
AACGCCCTCGATATATGGTGGGGAAATTTGGGGGAATATTTCCCCCATTT
TTTATTTTTTACCCCTTTT
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