EY664180

Overview
NameEY664180
Unique NameEY664180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664180 vs. ExPASy Swiss-Prot
Match: NAC2_RAT (Sodium/calcium exchanger 2 OS=Rattus norvegicus GN=Slc8a2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.380e-22
Identity = 50/96 (52.08%), Postives = 69/96 (71.88%), Query Frame = 1
Query:   88 NLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKR 375
            N  AG LGPGT+VGSAAF++F + AVCV V  AGE +KI  + V+ V   WS +AYVWLY+IL V++P V+  WEALLT++ + + ++ A+  DKR
Sbjct:  154 NFQAGELGPGTIVGSAAFNMFVVIAVCVYVIPAGESRKIKHLRVFFVTASWSIFAYVWLYLILAVFSPGVVQVWEALLTLVFFPVCVVFAWMADKR 249          
BLAST of EY664180 vs. ExPASy Swiss-Prot
Match: NAC2_HUMAN (Sodium/calcium exchanger 2 OS=Homo sapiens GN=SLC8A2 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.721e-22
Identity = 49/96 (51.04%), Postives = 69/96 (71.88%), Query Frame = 1
Query:   88 NLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKR 375
            N  AG LGPGT+VGSAAF++F + AVC+ V  AGE +KI  + V+ V   WS +AYVWLY+IL V++P V+  WEALLT++ + + ++ A+  DKR
Sbjct:  154 NFQAGELGPGTIVGSAAFNMFVVIAVCIYVIPAGESRKIKHLRVFFVTASWSIFAYVWLYLILAVFSPGVVQVWEALLTLVFFPVCVVFAWMADKR 249          
BLAST of EY664180 vs. ExPASy Swiss-Prot
Match: NAC1_RAT (Sodium/calcium exchanger 1 OS=Rattus norvegicus GN=Slc8a1 PE=2 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 4.533e-19
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 1
Query:   88 NLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKR 375
            N  AG LGP T+VGSAAF++F I A+CV V   GE +KI  + V+ V   WS +AY WLYIIL V +P V+  WE LLT   + + ++ A+  D+R
Sbjct:  157 NFTAGDLGPSTIVGSAAFNMFIIIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVSSPGVVEVWEGLLTFFFFPICVVFAWVADRR 252          
BLAST of EY664180 vs. ExPASy Swiss-Prot
Match: NAC1_MOUSE (Sodium/calcium exchanger 1 OS=Mus musculus GN=Slc8a1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.533e-19
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 1
Query:   88 NLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKR 375
            N  AG LGP T+VGSAAF++F I A+CV V   GE +KI  + V+ V   WS +AY WLYIIL V +P V+  WE LLT   + + ++ A+  D+R
Sbjct:  157 NFTAGDLGPSTIVGSAAFNMFIIIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVSSPGVVEVWEGLLTFFFFPICVVFAWVADRR 252          
BLAST of EY664180 vs. ExPASy Swiss-Prot
Match: NAC1_HUMAN (Sodium/calcium exchanger 1 OS=Homo sapiens GN=SLC8A1 PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 4.533e-19
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 1
Query:   88 NLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKR 375
            N  AG LGP T+VGSAAF++F I A+CV V   GE +KI  + V+ V   WS +AY WLYIIL V +P V+  WE LLT   + + ++ A+  D+R
Sbjct:  160 NFTAGDLGPSTIVGSAAFNMFIIIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVISPGVVEVWEGLLTFFFFPICVVFAWVADRR 255          
BLAST of EY664180 vs. ExPASy Swiss-Prot
Match: NAC1_FELCA (Sodium/calcium exchanger 1 OS=Felis catus GN=SLC8A1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.533e-19
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 1
Query:   88 NLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKR 375
            N  AG LGP T+VGSAAF++F I A+CV V   GE +KI  + V+ V   WS +AY WLYIIL V +P V+  WE LLT   + + ++ A+  D+R
Sbjct:  157 NFTAGDLGPSTIVGSAAFNMFIIIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVISPGVVEVWEGLLTFFFFPICVVFAWVADRR 252          
BLAST of EY664180 vs. ExPASy Swiss-Prot
Match: NAC1_CAVPO (Sodium/calcium exchanger 1 OS=Cavia porcellus GN=SLC8A1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.533e-19
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 1
Query:   88 NLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKR 375
            N  AG LGP T+VGSAAF++F I A+CV V   GE +KI  + V+ V   WS +AY WLYIIL V +P V+  WE LLT   + + ++ A+  D+R
Sbjct:  157 NFTAGDLGPSTIVGSAAFNMFIIIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVISPGVVEVWEGLLTFFFFPICVVFAWVADRR 252          
BLAST of EY664180 vs. ExPASy Swiss-Prot
Match: NAC1_CANFA (Sodium/calcium exchanger 1 OS=Canis familiaris GN=SLC8A1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.533e-19
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 1
Query:   88 NLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKR 375
            N  AG LGP T+VGSAAF++F I A+CV V   GE +KI  + V+ V   WS +AY WLYIIL V +P V+  WE LLT   + + ++ A+  D+R
Sbjct:  157 NFTAGDLGPSTIVGSAAFNMFIIIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVISPGVVEVWEGLLTFFFFPICVVFAWVADRR 252          
BLAST of EY664180 vs. ExPASy Swiss-Prot
Match: NAC1_BOVIN (Sodium/calcium exchanger 1 OS=Bos taurus GN=SLC8A1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.533e-19
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 1
Query:   88 NLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKR 375
            N  AG LGP T+VGSAAF++F I A+CV V   GE +KI  + V+ V   WS +AY WLYIIL V +P V+  WE LLT   + + ++ A+  D+R
Sbjct:  157 NFTAGDLGPSTIVGSAAFNMFIIIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVSSPGVVEVWEGLLTFFFFPICVVFAWVADRR 252          
BLAST of EY664180 vs. ExPASy Swiss-Prot
Match: NAC3_RAT (Sodium/calcium exchanger 3 OS=Rattus norvegicus GN=Slc8a3 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.319e-18
Identity = 44/93 (47.31%), Postives = 63/93 (67.74%), Query Frame = 1
Query:   97 AGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKR 375
            AG LGP T+VGSAAF++F I  +CV V   GE +KI  + V+ V   WS +AY+WLY+IL V++P V+  WE LLT+  + + ++ A+  DKR
Sbjct:  162 AGDLGPSTIVGSAAFNMFIIIGICVYVIPDGETRKIKHLRVFFVTAAWSVFAYIWLYMILAVFSPGVVQVWEGLLTLFFFPVCVLLAWVADKR 254          
The following BLAST results are available for this feature:
BLAST of EY664180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
NAC2_RAT4.380e-2252.08Sodium/calcium exchanger 2 OS=Rattus norvegicus GN... [more]
NAC2_HUMAN5.721e-2251.04Sodium/calcium exchanger 2 OS=Homo sapiens GN=SLC8... [more]
NAC1_RAT4.533e-1947.92Sodium/calcium exchanger 1 OS=Rattus norvegicus GN... [more]
NAC1_MOUSE4.533e-1947.92Sodium/calcium exchanger 1 OS=Mus musculus GN=Slc8... [more]
NAC1_HUMAN4.533e-1947.92Sodium/calcium exchanger 1 OS=Homo sapiens GN=SLC8... [more]
NAC1_FELCA4.533e-1947.92Sodium/calcium exchanger 1 OS=Felis catus GN=SLC8A... [more]
NAC1_CAVPO4.533e-1947.92Sodium/calcium exchanger 1 OS=Cavia porcellus GN=S... [more]
NAC1_CANFA4.533e-1947.92Sodium/calcium exchanger 1 OS=Canis familiaris GN=... [more]
NAC1_BOVIN4.533e-1947.92Sodium/calcium exchanger 1 OS=Bos taurus GN=SLC8A1... [more]
NAC3_RAT1.319e-1847.31Sodium/calcium exchanger 3 OS=Rattus norvegicus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-063-G04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664180 ID=EY664180; Name=EY664180; organism=Citrus sinensis; type=EST; length=925bp
CGCCATTGCAGATATTGCCCTGCTGGCCTTTGGGACTAGCTTCCCCCATA
TTCATTGGCTACAATTGATGCCATCCGAAGCATTGGAAACCTGTATGCAG
GAGGTTTGGGTCCTGGAACGCTCGTTGGTTCTGCTGCATTCGACCTGTTC
CCCATCCATGCTGTTTGTGTTGTAGTTCCAAAAGCTGGAGAACTGAAAAA
GATATCTGATATAGGAGTTTGGCTGGTAGAGCTTTTTTGGTCTTTCTGGG
CTTATGTCTGGCTATACATAATTTTAGAGGTATGGACCCCGAATGTGATT
ACATTTTGGGAGGCCTTACTGACGGTATTGCAATATGGATTGCTTCTGAT
ACATGCTTATGCTCAAGACAAACGTTGGCCTTATTTATCACTTCCTATAG
CAAGAACTGAAAGGCCAGAGGATTGGGTTCCACAAGAGACCACTTCATGT
AAAGATGAGAACTGTGATTATGATGAGTGCTCTGAAATACTTCAACTTGG
TGAAGATGAAAATAGGGGCGTTGTTGATATATTTTCCATTCATTCACCGA
ATGGGGCAGTTACCAGTATGATAAATCACATGTTTTTATGCCGTAGACTG
AATATGGTTTTAGTGGTAACTATGCATTTCAGCATTCCAGCAGTCTATTT
ATATTTCTGGTAGTTGTCTTGAAAGAGCAATGACTCATGGGCATAAACAC
TGAAGCTCAGGTTATAGNTNNTCTTTTATCCATCTTATTTTATTATTNNC
TTGATNCTTCGNATAAAGGTGCACTNGNTAGAAAAGCATCAATATATATA
TTTTTTTTTCAAAAAACCCAAATNCTGCTCTGACCCAAACATGGGTCTGC
ACGGGCCAGATCTAACTGGGGGGTCATTGGGCCCCCCACTCCTGACCATG
AGAAACAAAGGAGGGAATTTTAGCT
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