EY664171

Overview
NameEY664171
Unique NameEY664171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664171 vs. ExPASy Swiss-Prot
Match: TTC1_MOUSE (Tetratricopeptide repeat protein 1 OS=Mus musculus GN=Ttc1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26
Identity = 57/131 (43.51%), Postives = 87/131 (66.41%), Query Frame = 2
Query:   92 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRLEPLAXXXXXXXXXXXIGKLKEMGNSILGRFGMSTDNFKAVKDPNTGAYSISF 484
            RS+  SNR    +K  K E +I +C+KA++LNPTY++A++RRAE +EK +  +EA+ D K +LE DPS +QA+   +RL               +GKLK++GN +L  FG+ST+NF+  +D +TG+YSI+F
Sbjct:  154 RSVLFSNRAAARMKQDKKETAITDCSKAIQLNPTYIRAILRRAELYEKTDKLDEALEDYKSVLEKDPSVHQAREACMRLPKQIEERNERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINF 284          
BLAST of EY664171 vs. ExPASy Swiss-Prot
Match: TTC1_HUMAN (Tetratricopeptide repeat protein 1 OS=Homo sapiens GN=TTC1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.027e-26
Identity = 58/131 (44.27%), Postives = 87/131 (66.41%), Query Frame = 2
Query:   92 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRLEPLAXXXXXXXXXXXIGKLKEMGNSILGRFGMSTDNFKAVKDPNTGAYSISF 484
            RSI  SNR    +K  K E +I +C+KA++LNP+Y++A++RRAE +EK +  +EA+ D K ILE DPS +QA+   +RL               +GKLK++GN +L  FG+ST+NF+  +D +TG+YSI+F
Sbjct:  154 RSILFSNRAAARMKQDKKEMAINDCSKAIQLNPSYIRAILRRAELYEKTDKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERNERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINF 284          
BLAST of EY664171 vs. ExPASy Swiss-Prot
Match: TTC1_BOVIN (Tetratricopeptide repeat protein 1 OS=Bos taurus GN=TTC1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.369e-25
Identity = 57/131 (43.51%), Postives = 87/131 (66.41%), Query Frame = 2
Query:   92 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRLEPLAXXXXXXXXXXXIGKLKEMGNSILGRFGMSTDNFKAVKDPNTGAYSISF 484
            RS+  SNR    +K  K E +I +C+KA++LNP+Y++A++RRAE +EK +  +EA+ D K ILE DPS +QA+   +RL               +GKLK++GN +L  FG+ST+NF+  +D +TG+YSI+F
Sbjct:  154 RSVLFSNRAAARMKQEKKEMAISDCSKAIQLNPSYIRAILRRAELYEKTDKLDEALEDYKSILEKDPSVHQAREACMRLPKQIEERNERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINF 284          
BLAST of EY664171 vs. ExPASy Swiss-Prot
Match: TOM34_PONAB (Mitochondrial import receptor subunit TOM34 OS=Pongo abelii GN=TOMM34 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.919e-11
Identity = 29/77 (37.66%), Postives = 54/77 (70.13%), Query Frame = 2
Query:   83 AELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKR 313
            + L S  +SNR +C+L L ++ E++K+CT+AL+L+   +KA  RRA+AH+ L+ ++ + AD+  +L+ +P N  A++
Sbjct:  223 SNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSSFADISNLLQIEPRNGPAQK 299          
BLAST of EY664171 vs. ExPASy Swiss-Prot
Match: TOM34_HUMAN (Mitochondrial import receptor subunit TOM34 OS=Homo sapiens GN=TOMM34 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.919e-11
Identity = 29/77 (37.66%), Postives = 54/77 (70.13%), Query Frame = 2
Query:   83 AELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKR 313
            + L S  +SNR +C+L L ++ E++K+CT+AL+L+   +KA  RRA+AH+ L+ ++ + AD+  +L+ +P N  A++
Sbjct:  223 SNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSSFADISNLLQIEPRNGPAQK 299          
BLAST of EY664171 vs. ExPASy Swiss-Prot
Match: DNJC7_DICDI (DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.919e-11
Identity = 37/129 (28.68%), Postives = 65/129 (50.39%), Query Frame = 2
Query:   17 EAKEGPSASEKKEVAPALVPEMAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRLEPLAXXXXXXXXXXXIGKLKEMGNS 403
            ++K   +A +    A ++ P++  + S  +SNR    + L +  E+I +CT A+ ++P Y KA IRRA+   K E++E+A+ D +K    DP N + +R I   +              +G  KE G +
Sbjct:  247 QSKNYQAAYDSFTEALSIDPKLETMNSQLYSNRAAALVHLNRISEAINDCTSAVTIDPNYGKAYIRRAQCQMKQENYEDAVRDYEKAQSLDPENGELQRNIKEAKIAHKKSLRKDYYKILGVSKEAGET 375          
BLAST of EY664171 vs. ExPASy Swiss-Prot
Match: SPAG1_HUMAN (Sperm-associated antigen 1 OS=Homo sapiens GN=SPAG1 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 2
Query:   77 EMAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRL 328
            E+A+  SI +SNR  C+LK G     I++C +ALEL+P  MK L+RRA A+E LE + +A  D K +L+ D     A  ++ RL
Sbjct:  481 EIADDLSILYSNRAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMAYETLEQYGKAYVDYKTVLQIDCGLQLANDSVNRL 564          
BLAST of EY664171 vs. ExPASy Swiss-Prot
Match: SPAG1_MOUSE (Sperm-associated antigen 1 OS=Mus musculus GN=Spag1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.526e-11
Identity = 29/79 (36.71%), Postives = 55/79 (69.62%), Query Frame = 2
Query:   95 SICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRLE 331
            +I ++NR    +KL ++  ++++C KALEL+P  +KAL+RRA  ++     +EA+ D++K+L+ +P N+ AK+T+  +E
Sbjct:  246 AIAYNNRAQAEIKLQRWSSALEDCEKALELDPGNVKALLRRATTYKHQNKLQEAVDDLRKVLQVEPDNDLAKKTLSEVE 324          
The following BLAST results are available for this feature:
BLAST of EY664171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
TTC1_MOUSE4.706e-2643.51Tetratricopeptide repeat protein 1 OS=Mus musculus... [more]
TTC1_HUMAN8.027e-2644.27Tetratricopeptide repeat protein 1 OS=Homo sapiens... [more]
TTC1_BOVIN1.369e-2543.51Tetratricopeptide repeat protein 1 OS=Bos taurus G... [more]
TOM34_PONAB1.919e-1137.66Mitochondrial import receptor subunit TOM34 OS=Pon... [more]
TOM34_HUMAN1.919e-1137.66Mitochondrial import receptor subunit TOM34 OS=Hom... [more]
DNJC7_DICDI1.919e-1128.68DnaJ homolog subfamily C member 7 homolog OS=Dicty... [more]
SPAG1_HUMAN5.585e-1142.86Sperm-associated antigen 1 OS=Homo sapiens GN=SPAG... [more]
SPAG1_MOUSE9.526e-1136.71Sperm-associated antigen 1 OS=Mus musculus GN=Spag... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-063-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664171 ID=EY664171; Name=EY664171; organism=Citrus sinensis; type=EST; length=886bp
ATCAGCTTCTGCGCCGGAGGCGAAGGAAGGGCCCTCGGCATCGGAGAAGA
AGGAAGTGGCGCCGGCGCTGGTGCCGGAAATGGCAGAGCTGCGTTCCATA
TGCCATTCGAATCGTGGAATATGCTTTTTGAAGCTTGGAAAATTCGAGGA
GTCTATCAAGGAATGCACAAAGGCGTTGGAGCTTAATCCTACATATATGA
AAGCTCTGATCAGAAGAGCAGAGGCGCATGAAAAGCTTGAACACTTTGAA
GAGGCTATTGCTGATATGAAGAAAATCTTGGAATTTGATCCTTCAAATAA
TCAAGCCAAGAGAACCATTCTTCGTTTGGAACCACTGGCAGAAGAAAAAC
GTGAAAAGATGAAGGAAGAGATGATTGGAAAGCTAAAAGAAATGGGTAAC
TCTATCCTGGGCCGTTTTGGGATGAGCACTGACAACTTCAAAGCTGTTAA
AGATCCGAACACTGGCGCCTACTCAATATCATTCCAGAAATAGGTTGGTT
CAATATAACTTTAATTTTTTATTGGAACATAGTGTGAGAAGACTGCACTC
AGGCCATATAGTGAAACAGGAATCCTCCCTTGGGCATCACACTGTAAAGG
TGATTTAAGTCTTACAAGCTGAGCAAACAGTTTAAATGTCGTGTTAGAGT
TTTGAAGTGATGCAGTTTCCTAGTTTGTTTGGTGTCTTGTAAGTTGACAG
TCAAGATGTTGTTCTTGCCCTGTTTGAAGAAATATTATCAGCGTCTTTTT
ACTGCCATTTTTATCCGAGTACAGCTTTAAATGAGCTATANTNATNNCAT
ATAANCATCTGTGCTAAGAATAGGGTCTATACTAAACCAGTGATGTTCCT
CTATTGGGGTTGATACCATATTCTTGAGTGTTCAGA
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