EY664146

Overview
NameEY664146
Unique NameEY664146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY664146 vs. ExPASy Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 47/174 (27.01%), Postives = 75/174 (43.10%), Query Frame = 3 
Query:   15 HIGQNLILDSDLCLLHVEERKIMAVGPAN--------WQKACFVPTKSDNLVVGFRMWLKKYSGGQFNWGGKFDATLP---PTLPREQLMDRYWSHVVNCKSCNAAHKSLNALEXXXXXXXXXXXXXXAATKQNAMSMATRATIVSFAVICFAASKWLSHFVYKTFHYHDYNHA 503
            H   NL+ D D+ +L  +E+  +A    +        + K  F PT++D  V+ FR WL+++   Q  W G   +  P     L + Q++DR+  H   C SC  A+ S   L+              AAT      +  R  +   ++I  AAS +  H   K F + DY H+
Sbjct:  366 HWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQADRFVLAFRNWLRRHGKSQPEWFGSTPSNQPLPSTVLTKRQMLDRFDQHTQVCSSCKGAYNSFQILK----KFLVGATVFWAATAGVPSDVQIRLVLAGLSLIS-AASAYALHEQEKNFVFRDYVHS 534
The following BLAST results are available for this feature:
BLAST of EY664146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PAO_ARATH3.237e-1127.01Pheophorbide a oxygenase, chloroplastic OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-063-D05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664146 ID=EY664146; Name=EY664146; organism=Citrus sinensis; type=EST; length=882bp
CCACGCGTCCGTTTCATATTGGACAGAACCTAATTCTGGATTCAGATTTA
TGCCTGCTTCACGTTGAGGAGCGAAAGATAATGGCTGTTGGCCCTGCTAA
TTGGCAGAAAGCTTGTTTTGTGCCAACAAAATCCGATAACCTGGTAGTTG
GTTTCAGGATGTGGTTAAAAAAATATTCCGGTGGCCAATTCAATTGGGGA
GGAAAATTCGATGCAACTCTTCCACCAACACTGCCAAGAGAACAGCTCAT
GGACAGGTACTGGTCTCATGTGGTGAACTGCAAAAGTTGCAATGCTGCAC
ACAAGAGTCTCAATGCACTTGAGGTCATACTGCAAGTCGTCTCTGTTGTT
TCAGTTGGGATTGTTGCTGCAACCAAGCAGAACGCCATGTCAATGGCTAC
AAGAGCTACGATCGTGTCATTTGCAGTAATCTGCTTTGCAGCTTCAAAAT
GGTTGTCTCACTTTGTCTACAAAACCTTTCATTATCATGACTACAATCAT
GCTCTTCGCTAAGTTTAGCATTGGTAATACTGTAACTTTTAAAATAATTG
CTATTACTTATAGCGTTGAAATAATCTGCCGTGAGCAAAATCAATTTAAA
AACTGATAAATTTTATTTTAAAAAATATTGTGTCTTAAAAAATAGTCGTA
TATAAGTTTACATTGGTCATAATGTTGAATAAAATGTANGAAAATTATCA
TTCGTGTACCCTAAAGATGCACTTTTATCAAACATATTACAACACTTTCA
AGGTGTATCACTCATCCACCCAAAAATACCAAATATATCTACCCACCACT
ATTNCGTTAGCCACCGTTTGCAAACTAACAGAATTGTTGCGAAATGACAA
TATGCCCTTAAACTAAAAAAAACGCAAAAGAC
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