EY664143

Overview
NameEY664143
Unique NameEY664143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664143 vs. ExPASy Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.585e-18
Identity = 47/126 (37.30%), Postives = 73/126 (57.94%), Query Frame = 1
Query:  259 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLXA---DAKIPQS--ACGRTYDVKESQGVVWVW 615
            E + +++ W + WYP+ L +D+  + P    +  + +VL+ D N +    + D CPHRLA LSEG+L + G L+C YHGW F G G C +IPQ      +A+  +S  AC   +    SQG+++VW
Sbjct:   76 EEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIKFPTMVSQGLLFVW 201          
BLAST of EY664143 vs. ExPASy Swiss-Prot
Match: CAO_CHLRE (Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii GN=CAO PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.904e-17
Identity = 43/149 (28.86%), Postives = 72/149 (48.32%), Query Frame = 1
Query:  295 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLXADAKIPQSACGRTYDVKESQGVVWVWMSQXTPPNP**LPWVEKPCQARFQDVSTIHETXYDHFILLEN 741
            WYP   +  +P D  +   +F +  V+++D  G+  C +D C HR   LS G++++G++ C YHGW+F G+G C K+P       +  +A        E  G +WVW     P     LP   +P +        + +   +H +L+EN
Sbjct:  305 WYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSCIRDECAHRGCPLSLGKVVEGQVMCPYHGWEFNGDGACTKMPSTPFCRNVGVAA----LPCAEKDGFIWVWPGDGLPAET--LPDFAQPPEGFLIHAEIMVDVPVEHGLLIEN 447          
BLAST of EY664143 vs. ExPASy Swiss-Prot
Match: CAO_ORYSJ (Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica GN=CAO PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.305e-16
Identity = 43/150 (28.67%), Postives = 75/150 (50.00%), Query Frame = 1
Query:  295 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQL-XADAKIPQSACGRTYDVKESQGVVWVWMSQXTPPNP**LPWVEKPCQARFQDVSTIHETXYDHFILLEN 741
            WYP+  + D+ DD  + +  F++Q V+++  +G   C  + C HR   L  G + +GR++C YHGW++  +GKC K+P     + +I    C       E +G+VW+W     P +   +P +  P          + E   +H +LL+N
Sbjct:  220 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSLPC------FEQEGMVWIWPGNDPPKST--IPSLLPPSGFTIH-AEIVMELPVEHGLLLDN 360          
BLAST of EY664143 vs. ExPASy Swiss-Prot
Match: CBAA_COMTE (3-chlorobenzoate-3,4-dioxygenase oxygenase subunit OS=Comamonas testosteroni GN=cbaA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.316e-16
Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  289 EEWYP-LYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLXADAKIPQSACGRTYDVKESQGVVWVWM 618
            E W P L  T+     +P+ L +  +++V +++ +G +     RCPHR   L  G++ +G L C+YHGW+F  EGKCV +P +  + +   S     Y VKE  GVVWV+M
Sbjct:   25 EYWIPALKSTELEAGGSPVRLLLLGEKLVAFREPSGAVGVMDSRCPHRGVSLFMGRVEEGGLRCVYHGWKFSAEGKCVDMPSVRPEDEFKNSVRVARYPVKEMAGVVWVYM 135          
BLAST of EY664143 vs. ExPASy Swiss-Prot
Match: CAO_ARATH (Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.362e-16
Identity = 56/206 (27.18%), Postives = 93/206 (45.15%), Query Frame = 1
Query:  130 VIISLNKTPKSRKCHAVT-DRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQL-XADAKIPQSACGRTYDVKESQGVVWVWMSQXTPPNP**LPWVEKPCQARFQDVSTIHETXYDHFILLEN 741
            V+  L+K   S    AV  DR  T+T      + GP        +           WYP+  T D+  D  + +  F+Q  V+++  +G+  C ++ C HR   L  G + +GR++C YHGW++  +G+C K+P       KI    C       E +G++W+W     PP P  LP ++ P          + +   +H +LL+N
Sbjct:  174 VVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNF---------WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKLLKVKIKSLPC------LEQEGMIWIWPGD-EPPAP-ILPSLQPP-SGFLIHAELVMDLPVEHGLLLDN 361          
BLAST of EY664143 vs. ExPASy Swiss-Prot
Match: CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.232e-15
Identity = 43/138 (31.16%), Postives = 63/138 (45.65%), Query Frame = 1
Query:  229 GPASAEERRGERQVADYDWTEE-WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLXADAKIPQSACGRTYDVKESQGVVWVWMSQXTPPN 639
            GP   + RR    +   D     WYP    K +     +   +F    VL++D +    C +D C HR   LS G++I+G ++C YHGW+F+G G C K+P       +  +A        E  G VWVW     PP+
Sbjct:  111 GPKPKDSRRLRSSLELEDGLRNFWYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEHSAPTCIKDSCAHRACPLSLGKVINGHVQCPYHGWEFDGSGACTKMPSTRMCHGVGVAA----LPCVEKDGFVWVWPGDGPPPD 244          
BLAST of EY664143 vs. ExPASy Swiss-Prot
Match: VANA_PSEUH (Vanillate O-demethylase oxygenase subunit OS=Pseudomonas sp. (strain HR199 / DSM 7063) GN=vanA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 44/128 (34.38%), Postives = 65/128 (50.78%), Query Frame = 1
Query:  295 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLXADAKIPQSACGRTYDVKESQGVVWVWMSQXTPPNP---**LPWVEKP 669
            WY +  T D   D PLG  + +++IV Y+   G +   +D CPHR A LS G + DG+L C YHG +   EGK + +P      ++    C ++Y V+E  G +WVW       +P     L W + P
Sbjct:    7 WY-VACTPDEIADKPLGRQICNEKIVFYRGPEGRVAAVEDFCPHRGAPLSLGFVRDGKLICGYHGLEMGCEGKTLAMP----GQRVQGFPCIKSYAVEERYGFIWVWPGDRELADPALIHHLEWADNP 129          
BLAST of EY664143 vs. ExPASy Swiss-Prot
Match: PHT3_PSEPU (Phthalate 4,5-dioxygenase oxygenase subunit OS=Pseudomonas putida GN=pht3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.449e-12
Identity = 34/110 (30.91%), Postives = 58/110 (52.73%), Query Frame = 1
Query:  295 WYPLYLTKDV--PDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLXADAKIPQSACGRTYDVKESQGVVWVWM 618
            W P+ L ++V  PD  P+   +F + +V+++D +G +    + CPHR   L  G+  +  L CLYHGW+ + +G  V++    A + + Q      Y  +E  G VW +M
Sbjct:   27 WTPVCLLEEVSEPDGTPVRARLFGEDLVVFRDTDGRVGVMDEYCPHRRVSLIYGRNENSGLRCLYHGWKMDVDGNVVEMVSEPAASNMCQKVKHTAYKTREWGGFVWAYM 136          
The following BLAST results are available for this feature:
BLAST of EY664143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PAO_ARATH1.585e-1837.30Pheophorbide a oxygenase, chloroplastic OS=Arabido... [more]
CAO_CHLRE3.904e-1728.86Chlorophyllide a oxygenase, chloroplastic OS=Chlam... [more]
CAO_ORYSJ3.305e-1628.67Chlorophyllide a oxygenase, chloroplastic OS=Oryza... [more]
CBAA_COMTE4.316e-1636.943-chlorobenzoate-3,4-dioxygenase oxygenase subunit... [more]
CAO_ARATH7.362e-1627.18Chlorophyllide a oxygenase, chloroplastic OS=Arabi... [more]
CAO_DUNSA6.232e-1531.16Chlorophyllide a oxygenase, chloroplastic OS=Dunal... [more]
VANA_PSEUH2.618e-1334.38Vanillate O-demethylase oxygenase subunit OS=Pseud... [more]
PHT3_PSEPU6.449e-1230.91Phthalate 4,5-dioxygenase oxygenase subunit OS=Pse... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-063-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664143 ID=EY664143; Name=EY664143; organism=Citrus sinensis; type=EST; length=874bp
TGTGTTCCTTTCCTGCATCTTCTTCTTCAACAAAGCACCCACACCATTAT
GGCTTTATCATTACGCTCGTTATTCTTTAGCCCACTTCTCAAGATCCCCT
CTCCAAAACTTACACCACCAACTACAAATGTTATAATAAGCTTAAACAAA
ACACCTAAGTCGAGAAAATGCCATGCAGTGACAGATAGGAGCAGTACTAG
TACTGTTGGTGATCATAAGGTTCTTGTGGGGCCTGCTAGTGCTGAGGAAA
GGAGAGGAGAGAGACAGGTGGCAGATTATGATTGGACAGAAGAGTGGTAT
CCTTTGTATCTCACTAAGGATGTTCCGGATGATGCACCTTTGGGCCTCAC
TGTGTTTGATCAGCAGATAGTATTGTATAAAGATGGCAACGGGGAGCTTC
GGTGTTATCAAGATCGGTGCCCCCATAGGTTAGCAAAACTTTCTGAAGGC
CAACTGATCGACGGCAGGCTTGAATGTTTGTACCATGGCTGGCAGTTTGA
AGGCGAGGGTAAATGTGTTAAGATACCTCAGCTTNCAGCTGATGCTAAAA
TTCCTCAATCGGCTTGTGGTAGAACGTATGATGTGAAGGAATCCCAAGGT
GTTGTATGGGTTTGGATGTCACAAAANACACCGCCTAACCCTTGATAGCT
TCCATGGGTTGAGAAACCTTGCCAGGCCAGGTTTCAAGATGTTTCAACAA
TCCATGAAACTNCATATGATCACTTCATACTCCTTGAGAACTGATGGATC
CTGCCCATATTCCAATCTACACGATAGGACCGACTGGACTGCTAAAAGAA
AAGATGCCAAACCTTTTGGCTTGGAGTTACTGAACGTACAGATCGAGGGG
TTGCGGGCAAGTGGGGTTATGAAA
back to top