EY664135

Overview
NameEY664135
Unique NameEY664135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664135 vs. ExPASy Swiss-Prot
Match: S38A1_RAT (Sodium-coupled neutral amino acid transporter 1 OS=Rattus norvegicus GN=Slc38a1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.753e-15
Identity = 63/222 (28.38%), Postives = 111/222 (50.00%), Query Frame = 2
Query:  149 KLFTTFPVLVTAYICHHNIHPIENELKDPTQIKSIVRTSITLCS--TVYITTSFFGLLLFGDRTLDDVLANFDGDLGIPYSSLLDDVVRVSYGIHLMLVFPIVFFSLRLNLDGLLFPYAIPIAFDNRRFFAVTAALMGFIFVGANFVPSIWDAFQFTGATAAVXVGFIFPAAIALRDTHGXATEN-DRLXSWLMISLAGSSSTVAVSSDIY----SIFNGVG 793
            K     P +  A++CH ++ PI +ELKD +Q K  + ++I+  +   +Y  T+ FG L F ++   D+L  +          +L   VR++  + ++L  P++FF++R +    LF  A    F   R   VT  L+  I +   F+PS+ D F   G T+A  + FI P+++ L+ T+    +N  R+ + L ++L    S +++   IY    S  NG G
Sbjct:  272 KTVYALPTIAFAFVCHPSVLPIYSELKDRSQKKMQMVSNISFFAMFVMYFLTAIFGYLTFYEKVQSDLLHKYQST-----GDILILTVRLAVIVAVILTVPVLFFTVRSS----LFELAKKTKFHLCRHVLVTIILLVIINLLVIFIPSMKDIFGVVGVTSANMLIFILPSSLYLKITNQDGDKNTQRIWAALFLALGVLFSLISIPLVIYDWACSSSNGEG 484          
BLAST of EY664135 vs. ExPASy Swiss-Prot
Match: S38A1_HUMAN (Sodium-coupled neutral amino acid transporter 1 OS=Homo sapiens GN=SLC38A1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 60/211 (28.44%), Postives = 104/211 (49.29%), Query Frame = 2
Query:  149 KLFTTFPVLVTAYICHHNIHPIENELKDPTQIKSIVRTSITLCS--TVYITTSFFGLLLFGDRTLDDVLANFDGDLGIPYSSLLDDVVRVSYGIHLMLVFPIVFFSLRLNLDGLLFPYAIPIAFDNRRFFAVTAALMGFIFVGANFVPSIWDAFQFTGATAAVXVGFIFPAAIALRDTHGXATE-NDRLXSWLMISLAGSSSTVAVSSDIY 772
            K     P +  A++CH ++ PI +ELKD +Q K  + ++I+  +   +Y  T+ FG L F D    D+L  +          +L   VR++  + ++L  P++FF++R +    LF  A    F+  R   VT  L+  I +   F+PS+ D F   G T+A  + FI P+++ L+ T     +   R+ + L + L    S V++   IY
Sbjct:  274 KTVYALPTIAFAFVCHPSVLPIYSELKDRSQKKMQMVSNISFFAMFVMYFLTAIFGYLTFYDNVQSDLLHKYQSK-----DDILILTVRLAVIVAVILTVPVLFFTVRSS----LFELAKKTKFNLCRHTVVTCILLVVINLLVIFIPSMKDIFGVVGVTSANMLIFILPSSLYLKITDQDGDKGTQRIWAALFLGLGVLFSLVSIPLVIY 475          
BLAST of EY664135 vs. ExPASy Swiss-Prot
Match: S38A1_PONAB (Sodium-coupled neutral amino acid transporter 1 OS=Pongo abelii GN=SLC38A1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14
Identity = 60/211 (28.44%), Postives = 104/211 (49.29%), Query Frame = 2
Query:  149 KLFTTFPVLVTAYICHHNIHPIENELKDPTQIKSIVRTSITLCS--TVYITTSFFGLLLFGDRTLDDVLANFDGDLGIPYSSLLDDVVRVSYGIHLMLVFPIVFFSLRLNLDGLLFPYAIPIAFDNRRFFAVTAALMGFIFVGANFVPSIWDAFQFTGATAAVXVGFIFPAAIALRDTHGXATE-NDRLXSWLMISLAGSSSTVAVSSDIY 772
            K     P +  A++CH ++ PI +ELKD +Q K  + ++I+  +   +Y  T+ FG L F D    D+L  + G        +L   VR++  + ++L  P++FF++R +    LF  A    F+  R   VT  L+  I +    +PS+ D F   G T+A  + FI P+++ L+ T     +   R+ + L + L    S V++   IY
Sbjct:  274 KTVYALPTIAFAFVCHPSVLPIYSELKDRSQKKMQMVSNISFFAMFVMYFLTAIFGYLTFYDNVQSDLLHKYQGK-----DDILILTVRLAVIVAVILTVPVLFFTVRSS----LFELAKKTKFNLCRHTVVTCILLVVINLLVISIPSMKDIFGVVGVTSANMLIFILPSSLYLKITDQDGDKGTQRIWAALFLGLGVLFSLVSIPLVIY 475          
BLAST of EY664135 vs. ExPASy Swiss-Prot
Match: S38A1_MOUSE (Sodium-coupled neutral amino acid transporter 1 OS=Mus musculus GN=Slc38a1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 58/211 (27.49%), Postives = 105/211 (49.76%), Query Frame = 2
Query:  149 KLFTTFPVLVTAYICHHNIHPIENELKDPTQIKSIVRTSITLCS--TVYITTSFFGLLLFGDRTLDDVLANFDGDLGIPYSSLLDDVVRVSYGIHLMLVFPIVFFSLRLNLDGLLFPYAIPIAFDNRRFFAVTAALMGFIFVGANFVPSIWDAFQFTGATAAVXVGFIFPAAIALRDTHGXATE-NDRLXSWLMISLAGSSSTVAVSSDIY 772
            K     P +  A++CH ++ PI +ELKD +Q K  + ++I+  +   +Y  T+ FG L F ++   D+L  +          +L   VR++  + ++L  P++FF++R +    LF  A    F   R   VT  L+  I +   F+PS+ D F   G T+A  + FI P+++ L+ T+    +   R+ + L + L    S +++   IY
Sbjct:  272 KTVYALPTIAFAFVCHPSVLPIYSELKDRSQKKMQMVSNISFFAMFVMYFLTAIFGYLTFYEKVQSDLLHKYQST-----GDILILTVRLAVIVAVILTVPVLFFTVRSS----LFELAKKTKFHLCRHVLVTIILLIIINLLVIFIPSMKDIFGVVGVTSANMLIFILPSSLYLKITNQDGDKGTQRIWAALFLGLGVLFSLISIPLVIY 473          
BLAST of EY664135 vs. ExPASy Swiss-Prot
Match: S38A4_HUMAN (Sodium-coupled neutral amino acid transporter 4 OS=Homo sapiens GN=SLC38A4 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13
Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 2
Query:  167 PVLVTAYICHHNIHPIENELKDPT--QIKSIVRTSITLCSTVYITTSFFGLLLFGDRTLDDVLANFDGDLGIPYSSLLDDVVRVSYGIHLMLVFPIVFFSLRLNLDGLLFPYAIPIAFDNRRFFAVTAALMGFIFVGANFVPSIWDAFQFTGATAAVXVGFIFPAAIALR 670
            P+LV A++CH  + PI +ELKD +  +++++   SIT    +Y+  + FG L F     D++L  +     +    L+   VR++  + + L  PIV F +R ++  LLFP      F   R F + A L+    V    VP+I   F F GA++A  + FI PA   L+
Sbjct:  337 PILVFAFVCHPEVLPIYSELKDRSRRKMQTVSNISITGMLVMYLLAALFGYLTFYGEVEDELLHAYSKVYTLDIPLLM---VRLAVLVAVTLTVPIVLFPIRTSVITLLFPKR---PFSWIRHFLIAAVLIALNNVLVILVPTIKYIFGFIGASSATMLIFILPAVFYLK 500          
BLAST of EY664135 vs. ExPASy Swiss-Prot
Match: S38A5_MOUSE (Sodium-coupled neutral amino acid transporter 5 OS=Mus musculus GN=Slc38a5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 58/187 (31.02%), Postives = 90/187 (48.13%), Query Frame = 2
Query:  161 TFPVLVTAYICHHNIHPIENELKDPTQ--IKSIVRTSITLCSTVYITTSFFGLLLFGDRTLDDVLANFDGDLGIPYSSLLDDVVRVSYGIHLMLVFPIVFFSLRLNLDGLLFPYAIPIAFDNRRFFAVTAALMGFIFVGANFVPSIWDAFQFTGATAAVXVGFIFPAAIALRDTHGXATENDRLXSW 715
            T P++  A++CH  + PI  EL  PTQ  ++++   SI     +Y  T+ FG L F      ++L  +  +       +L   VR++  + + L  P+V F +R  L  LLFP     AF   R  A+   L+  + +    VP+I D F F G+T+A  + FI P+   LR      TE + L SW
Sbjct:  268 TVPIMAFAFVCHPEVLPIYTELCRPTQRRMQAVANMSIGAMFIMYGLTATFGYLTFYSTVKAEMLEMYTQE------DMLILCVRLAVLLAVTLTVPVVLFPIRRALQQLLFPSK---AFSWLRHVAIALILLILVNILVICVPTIRDIFGFIGSTSAPSLIFILPSVFYLRIV---PTEVEPLFSW 442          
BLAST of EY664135 vs. ExPASy Swiss-Prot
Match: S38A4_PONAB (Sodium-coupled neutral amino acid transporter 4 OS=Pongo abelii GN=SLC38A4 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12
Identity = 53/170 (31.18%), Postives = 85/170 (50.00%), Query Frame = 2
Query:  167 PVLVTAYICHHNIHPIENELKDPT--QIKSIVRTSITLCSTVYITTSFFGLLLFGDRTLDDVLANFDGDLGIPYSSLLDDVVRVSYGIHLMLVFPIVFFSLRLNLDGLLFPYAIPIAFDNRRFFAVTAALMGFIFVGANFVPSIWDAFQFTGATAAVXVGFIFPAAIALR 670
            P+L  A++CH  + PI +ELKD +  +++++   SIT    +Y+  + FG L F     D++L  +          L+   VR++  + + L  PIV F +R ++  LLFP      F   R F + A L+    V    VP+I   F F GA++A  + FI PA   L+
Sbjct:  337 PILAFAFVCHPEVLPIYSELKDRSRRKMQTVSNISITGMLVMYLLAALFGYLTFYGEVEDELLHAYSKVYTFDIPLLM---VRLAVLVAVTLTVPIVLFPIRTSVTTLLFPKR---PFSWIRHFLIAAVLIALNNVLVILVPTIKYIFGFIGASSATMLIFILPAVFYLK 500          
BLAST of EY664135 vs. ExPASy Swiss-Prot
Match: S38A5_RAT (Sodium-coupled neutral amino acid transporter 5 OS=Rattus norvegicus GN=Slc38a5 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12
Identity = 58/183 (31.69%), Postives = 88/183 (48.09%), Query Frame = 2
Query:  149 KLFT-------TFPVLVTAYICHHNIHPIENELKDPTQ--IKSIVRTSITLCSTVYITTSFFGLLLFGDRTLDDVLANFDGDLGIPYSSLLDDVVRVSYGIHLMLVFPIVFFSLRLNLDGLLFPYAIPIAFDNRRFFAVTAALMGFIFVGANFVPSIWDAFQFTGATAAVXVGFIFPAAIALR 670
            KLFT       T P++  A++CH  + PI  EL  PTQ  ++++   SI     +Y  T+ FG L F      ++L  +  +       LL   VR++  + + L  P+V F +R  L  LLFP     AF   R  A+   L+  + +    VP+I D F F G+T+A  + FI P+   LR
Sbjct:  257 KLFTVDSQMSYTVPIMAFAFVCHPEVLPIYTELCCPTQRRMQAVANMSIGAMFIMYGLTATFGYLTFYSTVKAEMLEMYTQE------DLLILCVRLAVLLAVTLTVPVVLFPIRRALQQLLFPSK---AFSWPRHVAIALILLILVNILVICVPTIRDIFGFIGSTSAPSLIFILPSVFYLR 430          
BLAST of EY664135 vs. ExPASy Swiss-Prot
Match: S38A4_RAT (Sodium-coupled neutral amino acid transporter 4 OS=Rattus norvegicus GN=Slc38a4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.384e-12
Identity = 52/170 (30.59%), Postives = 87/170 (51.18%), Query Frame = 2
Query:  167 PVLVTAYICHHNIHPIENELKDPT--QIKSIVRTSITLCSTVYITTSFFGLLLFGDRTLDDVLANFDGDLGIPYSSLLDDVVRVSYGIHLMLVFPIVFFSLRLNLDGLLFPYAIPIAFDNRRFFAVTAALMGFIFVGANFVPSIWDAFQFTGATAAVXVGFIFPAAIALR 670
            P+L  A++CH  + PI +ELKD +  +++++   SIT    +Y+  + FG L F     D++L  +        + L+   VR++  + + L  PIV F +R ++  LLFP      F   + F + A ++    V    VP+I   F F GA++A  + FI PAA  L+
Sbjct:  337 PILAFAFVCHPEVLPIYSELKDRSRRKMQTVSNISITGMLVMYLLAALFGYLSFYGEVEDELLHAYSKVYTFDTALLM---VRLAVLVAVTLTVPIVLFPIRTSVITLLFPRR---PFSWVKHFGIAAIIIALNNVLVILVPTIKYIFGFIGASSATMLIFILPAAFYLK 500          
BLAST of EY664135 vs. ExPASy Swiss-Prot
Match: S38A2_RAT (Sodium-coupled neutral amino acid transporter 2 OS=Rattus norvegicus GN=Slc38a2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.384e-12
Identity = 48/170 (28.24%), Postives = 87/170 (51.18%), Query Frame = 2
Query:  167 PVLVTAYICHHNIHPIENELKDPTQ--IKSIVRTSITLCSTVYITTSFFGLLLFGDRTLDDVLANFDGDLGIPYSSLLDDVVRVSYGIHLMLVFPIVFFSLRLNLDGLLFPYAIPIAFDNRRFFAVTAALMGFIFVGANFVPSIWDAFQFTGATAAVXVGFIFPAAIALR 670
            P+L  +++CH  + PI  ELK  ++  + ++ + S      +Y+  + FG L F +    ++L  +   +G   + +L  VVR++  + + L  P+V F +R ++  LL P      F   R   +T  ++ F  +   FVP+I D F F GA+AA  + FI P+A  ++
Sbjct:  295 PILTFSFVCHPAVLPIYEELKSRSRRRMMNVSKISFFAMFLMYLLAALFGYLTFYEHVESELLHTYSAIVG---TDILLLVVRLAVLVAVTLTVPVVIFPIRSSVTHLLCPTK---EFSWFRHSVITVTILAFTNLLVIFVPTIRDIFGFIGASAAAMLIFILPSAFYIK 458          
The following BLAST results are available for this feature:
BLAST of EY664135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
S38A1_RAT8.753e-1528.38Sodium-coupled neutral amino acid transporter 1 OS... [more]
S38A1_HUMAN3.326e-1428.44Sodium-coupled neutral amino acid transporter 1 OS... [more]
S38A1_PONAB5.674e-1428.44Sodium-coupled neutral amino acid transporter 1 OS... [more]
S38A1_MOUSE9.678e-1427.49Sodium-coupled neutral amino acid transporter 1 OS... [more]
S38A4_HUMAN3.678e-1331.76Sodium-coupled neutral amino acid transporter 4 OS... [more]
S38A5_MOUSE6.273e-1331.02Sodium-coupled neutral amino acid transporter 5 OS... [more]
S38A4_PONAB1.070e-1231.18Sodium-coupled neutral amino acid transporter 4 OS... [more]
S38A5_RAT1.825e-1231.69Sodium-coupled neutral amino acid transporter 5 OS... [more]
S38A4_RAT2.384e-1230.59Sodium-coupled neutral amino acid transporter 4 OS... [more]
S38A2_RAT2.384e-1228.24Sodium-coupled neutral amino acid transporter 2 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-063-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664135 ID=EY664135; Name=EY664135; organism=Citrus sinensis; type=EST; length=921bp
TTCATTGAGGTACACATCGGCATTGTCAGTCGGTTTGGCCATTGTATTCG
TGGTGATAACAGCGGGAGTTGCTGTTGTGAAAACAATTGATGGAAGCATT
TCCATGCCGCGTCTGTTGCCTGAAATTTCCAACCAGGCATCTTTTTGGAA
ACTTTTCACCACTTTCCCAGTTCTAGTCACTGCTTATATCTGCCACCACA
ATATTCACCCTATAGAGAATGAACTGAAAGACCCTACCCAGATTAAGTCG
ATTGTTCGGACATCAATCACATTGTGTTCAACTGTCTACATTACTACAAG
CTTCTTTGGACTCTTACTCTTTGGGGATCGCACTTTGGATGATGTACTTG
CCAATTTTGATGGTGACCTTGGAATTCCATATAGCTCATTGCTTGATGAT
GTGGTTAGAGTTAGCTATGGAATCCACTTGATGCTTGTTTTCCCAATTGT
GTTTTTCTCCCTTCGGCTCAACCTAGATGGTCTTCTCTTTCCCTATGCCA
TTCCCATTGCATTTGACAACCGGAGATTTTTTGCAGTGACTGCAGCTCTG
ATGGGATTTATCTTTGTTGGAGCCAATTTTGTGCCAAGTATCTGGGATGC
CTTCCAGTTTACTGGTGCAACAGCTGCTGTCTNCGTTGGGTTTATCTTTC
CAGCTGCAATCGCCCTTAGGGATACCCATGGAATNGCAACNGAGAACGAC
AGACTANCATCATGGTTGATGATATCTTTGGCCGGCTCATCGAGCACAGT
GGCAGTCTCTAGTGACATTTACAGCATTTTCAATGGAGTTGGGAGCTGAC
CTTAAAAGTTAAAGTGCGAGTGCAACCCTCTGGTTGCTCTTTTATTCAGT
TGCCGGTCTTCAAAATGATGCACTGGAGCCACTGGGTTGTGCACTGCGGT
TGAACAAAAATCTAGCTCCGT
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