EY664123

Overview
NameEY664123
Unique NameEY664123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664123 vs. ExPASy Swiss-Prot
Match: WOX13_ARATH (WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana GN=WOX13 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.294e-54
Identity = 118/243 (48.56%), Postives = 149/243 (61.32%), Query Frame = 2
Query:   59 GGDTSNGLCVKVMTDEQMELLTKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSHKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ---SCVVPNNAESEAETVTHA--ESRKQNPESIQSLED-------------SAPPPRDEDIYPQSPDL-------------RIDQMIGKMEIPGSFSSHWQVDRYDMLG 694
            G     G+ VKVMTDEQ E L KQIA+Y  ICE+LV+MHK  +AQ ++AG RMG  Y DP ++S  HK+TARQRWTPTP QLQILE ++D+  GTP KQKI+D+T EL++HGQI+E NVYNWFQNRRAR KRKQ        NN ESE ET   A  E R   PES+  L D             +   PR ED+  QSP++             R + ++GKM +  S++ +  V+ Y M G
Sbjct:   26 GSGAGGGMYVKVMTDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDLAGGRMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEALNEKRVVRPESLLGLPDGNSNNNGLGTTTATTTAPRPEDLCFQSPEISSDLHLLDVLSNPRDEHLVGKMGLAESYNLYDHVEDYGMSG 268          
BLAST of EY664123 vs. ExPASy Swiss-Prot
Match: WOX8_ORYSJ (WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica GN=WOX8 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.608e-54
Identity = 124/265 (46.79%), Postives = 157/265 (59.25%), Query Frame = 2
Query:   11 AKFSTGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLTKQIAVYAMICEQLVQMHKVFSAQNE-IAGMRMGNPYFDPFVASGSHKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSCVVPNNAESEAET-------------------------------------VTHAESRKQNPESIQSLEDSAPPPRDEDIYPQ-SPDLRIDQMIGKMEIPGSFSSHWQVDRYDM 688
            AK S+G  ++    + GG+   G  VKVMTDEQME+L KQI++YA ICEQLV+MH+  +AQ + IAGMR+GN Y DP +  G HK+TARQRWTPTP QLQILE+++D+  GTP KQKI+D+TAEL++HGQISETNVYNWFQNRRAR KRKQ+ +  NNAESEAE                                        H + R+    S  S   S+        Y     + RID  +GK+E PGSF      + +DM
Sbjct:    6 AKASSGEAVD---DRGGGEGGLGY-VKVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMRLGNLYCDPLMVPGGHKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQAALPNNNAESEAEADEESPTDKKPKSDRPLHQNIAMRDHNSERISEMHHFDTEHEQIRRMMYASNDSSSRSSGSLGQMSFYDNVMSNPRIDHFLGKVESPGSFPHMRSGESFDM 266          
BLAST of EY664123 vs. ExPASy Swiss-Prot
Match: WOX14_ARATH (WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana GN=WOX14 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.529e-40
Identity = 95/202 (47.03%), Postives = 128/202 (63.37%), Query Frame = 2
Query:   32 EMERQFQQDGGDTSNGLCVKVMTDEQMELLTKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGS-HKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSCVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLRIDQMI 628
            EM+R+ Q      +     +VMT+EQME+L KQIAVYA+IC+QLV +H   S+ + ++ G+R M   YFDP  AS S H+++ R RWTPT  QLQILE +YDE  GTP +++I+++  EL++HGQI+ETNVYNWFQNRRAR KRKQ      N +++   VT  E R        S  DS      E I   SPDL I+ ++
Sbjct:   16 EMDREIQ------NGAYSGRVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEERR--------SCGDSGGLESYEHILFPSPDLGIEHLL 203          
BLAST of EY664123 vs. ExPASy Swiss-Prot
Match: WOX10_ARATH (Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana GN=WOX10 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.092e-36
Identity = 88/188 (46.81%), Postives = 118/188 (62.77%), Query Frame = 2
Query:   89 KVMTDEQMELLTKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGS-HKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ---SCVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLRIDQMIGK 634
            +VMTDEQME L KQIA+YA++C+QLV +H   S+   ++ GM  M   YFDP VAS S H ++ R RWTPT  QLQILE++Y E  GTP  ++I+++T EL++HGQI E NVY+WFQNRRAR KRKQ   + +  + A+  A T T    R          +DS      E I   SPDL I+ ++ +
Sbjct:   13 RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAHGMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRARSKRKQPPTTTITSSQADDAAVTTTEERGR--------CGDDSGGFESYEHILFPSPDLGIEHLLNR 192          
BLAST of EY664123 vs. ExPASy Swiss-Prot
Match: WOX5_ORYSJ (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica GN=WOX5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 2
Query:  245 ASGSHKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 460
            AS +    A  RWTPT  Q+ +LE +Y +   TP  ++IQ +TA L +HG I   NV+ WFQN +AR ++KQ
Sbjct:   33 ASAAAAALANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQ 104          
BLAST of EY664123 vs. ExPASy Swiss-Prot
Match: WOX5_ORYSI (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica GN=WOX5 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 2
Query:  245 ASGSHKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 460
            AS +    A  RWTPT  Q+ +LE +Y +   TP  ++IQ +TA L +HG I   NV+ WFQN +AR ++KQ
Sbjct:   33 ASAAAAALANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQ 104          
The following BLAST results are available for this feature:
BLAST of EY664123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
WOX13_ARATH4.294e-5448.56WUSCHEL-related homeobox 13 OS=Arabidopsis thalian... [more]
WOX8_ORYSJ5.608e-5446.79WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. ... [more]
WOX14_ARATH3.529e-4047.03WUSCHEL-related homeobox 14 OS=Arabidopsis thalian... [more]
WOX10_ARATH3.092e-3646.81Putative WUSCHEL-related homeobox 10 OS=Arabidopsi... [more]
WOX5_ORYSJ4.496e-1144.44WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. ... [more]
WOX5_ORYSI4.496e-1144.44WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-063-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664123 ID=EY664123; Name=EY664123; organism=Citrus sinensis; type=EST; length=919bp
AAATGGAGTGGCCAAATTTTCAACAGGAGGAGAAATGGAGAGGCAGTTTC
AGCAAGATGGAGGGGACACTAGTAATGGGTTGTGCGTGAAAGTGATGACT
GATGAACAAATGGAGTTGCTCACGAAACAGATCGCTGTTTATGCTATGAT
TTGTGAGCAGCTTGTTCAGATGCACAAAGTCTTCTCTGCTCAAAATGAAA
TCGCTGGAATGAGAATGGGGAATCCATACTTTGATCCCTTTGTGGCATCT
GGCAGCCATAAGCTCACTGCCAGGCAACGGTGGACCCCGACACCTGCACA
GCTCCAAATCCTTGAGCATGTTTACGATGAATGCAAGGGGACTCCTCGCA
AACAGAAGATCCAGGATATGACCGCTGAATTGGCAAAACATGGCCAAATT
TCTGAAACAAATGTGTATAACTGGTTTCAGAATAGGAGAGCCCGTTTAAA
GAGAAAGCAATCATGTGTGGTTCCAAACAATGCAGAATCAGAAGCAGAGA
CAGTGACACATGCTGAATCCAGGAAGCAAAACCCGGAAAGCATCCAGTCA
TTGGAGGATTCAGCACCACCACCCAGGGACGAAGATATCTATCCTCAAAG
TCCTGATTTAAGGATTGACCAGATGATTGGTAAGATGGAAATTCCAGGAA
GCTTCAGTTCTCACTGGCAGGTAGACCGATATGACATGCTTGGATGATGC
CCTTNCAGAAGGCAGTAGCTTAATTGAGGATGGCTGACATGTCTTTTTGC
TATGAATATATGACCTACTATCTGAAAATCTACAAGGACAATTGAACGTG
GCCAAACTATATTGNTGTGGAATCTAAATACACCTATATTCTATTCTGAT
GAGCTGGGTTGGTGGAGCTCAAAAACTTTCTNNAGTGTTAAAGNTGATTG
CATGGAAGAATTTTAATTG
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