EY664102

Overview
NameEY664102
Unique NameEY664102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664102 vs. ExPASy Swiss-Prot
Match: ECH1_PONAB (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo abelii GN=ECH1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.826e-37
Identity = 87/168 (51.79%), Postives = 115/168 (68.45%), Query Frame = 1
Query:   31 PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVF-GTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLK---EAMSSNIQKRKPVFAKL 519
            PVIA++HG CIGGGVD+VTACDIR+C++DAFF VKEVD+ + AD+GTLQRLP ++G  + + ELA T R+    EA   GLVSRVF      LD  + L AE I+ KSP+AV  TK  LL SR+ +V + L+YVA+WN  ML + DL    +A + N + +   F+KL
Sbjct:  162 PVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAE-ISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQDLMKSVQAATENKELKSVTFSKL 328          
BLAST of EY664102 vs. ExPASy Swiss-Prot
Match: ECH1_MOUSE (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus GN=Ech1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.820e-37
Identity = 76/157 (48.41%), Postives = 112/157 (71.34%), Query Frame = 1
Query:   31 PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKR 498
            PVIA+IHG CIGGGVD+V+ACDIR+C++DAFF +KEVD+ + AD+GTLQRLP ++G  + + EL  + R+    EA + GLVSRVF     +      +A  I+ KSP+AV G+K  L+ SR+ +V++ LDY+ATWN  ML + D+ +++ + ++KR
Sbjct:  161 PVIAAIHGGCIGGGVDLVSACDIRYCTQDAFFQIKEVDMGLAADVGTLQRLPKVIGNQSLVNELTFSARKMMADEALDSGLVSRVFQDKDAMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKR 317          
BLAST of EY664102 vs. ExPASy Swiss-Prot
Match: ECH1_HUMAN (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo sapiens GN=ECH1 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.820e-37
Identity = 87/168 (51.79%), Postives = 115/168 (68.45%), Query Frame = 1
Query:   31 PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVF-GTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDL---KEAMSSNIQKRKPVFAKL 519
            PVIA++HG CIGGGVD+VTACDIR+C++DAFF VKEVD+ + AD+GTLQRLP ++G  + + ELA T R+    EA   GLVSRVF      LD  + L AE I+ KSP+AV  TK  LL SR+ +V + L+YVA+WN  ML + DL    +A + N + +   F+KL
Sbjct:  162 PVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAE-ISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQDLVKSVQATTENKELKTVTFSKL 328          
BLAST of EY664102 vs. ExPASy Swiss-Prot
Match: ECH1_RAT (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus GN=Ech1 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 6.296e-37
Identity = 76/157 (48.41%), Postives = 112/157 (71.34%), Query Frame = 1
Query:   31 PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKR 498
            PVIA+IHG CIGGGVD+++ACDIR+C++DAFF VKEVD+ + AD+GTLQRLP ++G  + + EL  T R+    EA + GLVSRVF     +      +A  I+ KSP+AV G+K  L+ SR+ +V++ LDY+ATWN  ML + D+ +++ + ++K+
Sbjct:  161 PVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKK 317          
BLAST of EY664102 vs. ExPASy Swiss-Prot
Match: ECH1_DICDI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Dictyostelium discoideum GN=ech1 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.645e-35
Identity = 82/162 (50.62%), Postives = 105/162 (64.81%), Query Frame = 1
Query:   25 SLPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRKPVF 510
            S P IA IHGACIGGGVD++TACDIR CS DA FS++E  L+I ADLGTLQR+  IVG G A ELALTG+      A+   LV+ V+     L    R +A  IA+ SPL V  TK  L  + + T+++GL  VA  N+  L SDDL E+ +S  +KR+P+F
Sbjct:  128 SKPTIALIHGACIGGGVDMITACDIRLCSSDAKFSIRETKLSIIADLGTLQRISKIVGSGFARELALTGKDIDAKTAERFNLVNHVYPDHDTLLSEGRKLALSIAQNSPLVVQATKLTLNHADDHTIDEGLYRVALQNAAFLKSDDLNESATSFFEKRQPIF 289          
BLAST of EY664102 vs. ExPASy Swiss-Prot
Match: ECHM_CAEEL (Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis elegans GN=ech-6 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.558e-19
Identity = 56/163 (34.36%), Postives = 88/163 (53.99%), Query Frame = 1
Query:   16 SAMSLPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRKP 504
            S +  PVIA+++G  +GGG ++   CDI +  + A F   E+++      G  QR     G   AME+ LTG      EAKE G+VS++F     + + V+L  E IA++SPL V   K  + ++ ELT+++GL +          + D KE M++  +KRKP
Sbjct:  122 SDVKKPVIAAVNGFALGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRWARAAGKSFAMEVCLTGNHVTAQEAKEHGIVSKIFPADQVVGEAVKL-GEKIADQSPLIVQMAKEAVNKAYELTLQEGLHFERRLFHATFATKDRKEGMTAFAEKRKP 283          
BLAST of EY664102 vs. ExPASy Swiss-Prot
Match: FADB_BACSU (Probable enoyl-CoA hydratase OS=Bacillus subtilis GN=fadB PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.657e-19
Identity = 57/160 (35.62%), Postives = 85/160 (53.12%), Query Frame = 1
Query:   31 PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRKPVF 510
            P+IA+IHGA +GGG+++  AC IR  ++DA   + E++L I       QRLP  VG   A+EL  +G    G EA +LGLVS       E+ +  + +A   AEKSP  +     +L  ++  + E  L   A        S+D KE + + ++KRKP F
Sbjct:   96 PIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPELNLGIIPGFAGTQRLPRYVGTAKALELIGSGEPISGKEALDLGLVSIGAKDEAEVIEKAKALAAKFAEKSPQTLASLLELLYSNKVYSYEGSLKLEAKRFGEAFESEDAKEGIQAFLEKRKPQF 255          
BLAST of EY664102 vs. ExPASy Swiss-Prot
Match: CRT_CLOAB (3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum GN=crt PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.722e-18
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 1
Query:   31 PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRK 501
            PVIA+++G  +GGG +I  +CDIR  S +A F   EV L IT   G  QRL  +VG G A +L  T +     EA  +GLV++V   S EL    + +A  I   +P+AV  +K  + R  +  ++  L + +        ++D K+AM++ I+KRK
Sbjct:   99 PVIAAVNGFALGGGCEIAMSCDIRIASSNARFGQPEVGLGITPGFGGTQRLSRLVGMGMAKQLIFTAQNIKADEALRIGLVNKVVEPS-ELMNTAKEIANKIVSNAPVAVKLSKQAINRGMQCDIDTALAFESEAFGECFSTEDQKDAMTAFIEKRK 254          
BLAST of EY664102 vs. ExPASy Swiss-Prot
Match: YNGF_BACSU (Putative enoyl-CoA hydratase/isomerase yngF OS=Bacillus subtilis GN=yngF PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.837e-18
Identity = 55/164 (33.54%), Postives = 85/164 (51.83%), Query Frame = 1
Query:   19 AMSLPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRKPVF 510
            A+  PVIA+I+G+ +GGG+++  ACD+R  ++ A   + E  LAI    G  QRLP ++G G A E   TGRR    EAKE+GLV  V      + +   L A  I+   P+AV   K  + +  E  +  GL          + + D +E + +  +KR+ V+
Sbjct:   95 ALPQPVIAAINGSALGGGLELALACDLRIATEAAVLGLPETGLAIIPGAGGTQRLPRLIGRGKAKEFIYTGRRVTAHEAKEIGLVEHVTAPCDLMPKAEELAA-AISANGPIAVRQAKFAINKGLETDLATGLAIEQKAYEQTIPTKDRREGLQAFQEKRRAVY 257          
BLAST of EY664102 vs. ExPASy Swiss-Prot
Match: ECHM_DICDI (Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.837e-18
Identity = 54/160 (33.75%), Postives = 83/160 (51.88%), Query Frame = 1
Query:   31 PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRKPVF 510
            P+IA+++G  +GGG ++   CDI    + A F   E+ L      G  QRL   +G   AMEL LTG     +EA++ GLVS+V      L +  ++ AE IA  S L V   K  +  S ELT+++G+ +          + D KE M++ ++KR P +
Sbjct:  116 PIIAAVNGYALGGGCELAMMCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNLTAVEAEKAGLVSKVVPVEELLTEATKM-AEKIASYSQLTVAMAKEAVNASYELTLQEGIRFERRMFHSTFGTHDQKEGMNAFVEKRTPTW 274          
The following BLAST results are available for this feature:
BLAST of EY664102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
ECH1_PONAB2.826e-3751.79Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
ECH1_MOUSE4.820e-3748.41Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
ECH1_HUMAN4.820e-3751.79Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
ECH1_RAT6.296e-3748.41Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
ECH1_DICDI2.645e-3550.62Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
ECHM_CAEEL1.558e-1934.36Probable enoyl-CoA hydratase, mitochondrial OS=Cae... [more]
FADB_BACSU2.657e-1935.63Probable enoyl-CoA hydratase OS=Bacillus subtilis ... [more]
CRT_CLOAB1.722e-1835.673-hydroxybutyryl-CoA dehydratase OS=Clostridium ac... [more]
YNGF_BACSU3.837e-1833.54Putative enoyl-CoA hydratase/isomerase yngF OS=Bac... [more]
ECHM_DICDI3.837e-1833.75Probable enoyl-CoA hydratase, mitochondrial OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-062-H05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664102 ID=EY664102; Name=EY664102; organism=Citrus sinensis; type=EST; length=926bp
TTCGTCAACCCCGCGTCCGCGATGTCGTTACCAGTCATCGCATCTATCCA
CGGGGCGTGTATCGGAGGCGGCGTCGATATTGTCACTGCCTGTGATATTC
GGTTCTGTTCAAAAGATGCTTTTTTTTCGGTCAAAGAGGTTGACTTGGCT
ATCACGGCAGATCTCGGGACTTTACAGAGGCTTCCGGCGATTGTCGGGTA
TGGTAACGCGATGGAATTGGCGTTGACGGGTCGTAGGTTTTGGGGTTTGG
AGGCTAAGGAGTTGGGTCTGGTTTCTCGGGTTTTCGGGACGAGTTATGAA
TTGGATCAGGGTGTCAGGCTTGTTGCCGAGGGAATTGCTGAAAAATCTCC
TCTTGCCGTCACCGGGACAAAAGCGGTTTTACTGAGAAGCCGAGAGCTTA
CTGTGGAACAAGGGTTAGATTACGTGGCAACTTGGAACTCCGGTATGCTT
CTGTCCGATGATTTGAAGGAGGCAATGTCTTCAAATATCCAGAAAAGGAA
GCCTGTTTTTGCCAAGCTCTGATGTTATTACCCCTTTCTTCTTTCATTTA
TCTGTATCTTAACCGTCCATCGCAACGCAACGCACTATAATAATAATAAT
AATAATAATAATAATAATAATAATAATAATATTTTATTTGAGGACAGAAG
TGAAATTATAAAATANGAAGTTGATTCCTTACCCTTTCATTGGAATCAAG
TTTTCATTCTTTAATTTCAAAAACATGTGAAATTTATATATTTTATTCTC
ATTCCTATCTCCTATTTAGAAAATAAACACCATCAATCTTTTTCCCTTTA
AATTTTGATTCACCTAGCCTGTAAGTATCGCATCCGTAAAATCTTCTGCT
CTTTCTCACTTCCCCGTTTTGGGAAAGGCACAACAAATAATGCTCGCTCT
TCTTCTTTATTTATGTGGGGCTCCTA
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