EY664080

Overview
NameEY664080
Unique NameEY664080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 1.436e-83
Identity = 155/222 (69.82%), Postives = 172/222 (77.48%), Query Frame = 2
Query:   77 MASTFTAMSSISSMIAPNGRMTDXXXXXXXXXXXXXXXXXXXXFGRRQSV--ALRRARTPKIYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVKIVNLPM*QLLVQGTTMKVG 736
            MASTFTA SSI SM+APN   TD                    FGRRQ+V   LRR+    + AAK+LHFNKDG  ++KLQ GVNKLADLVGVTLGPKGRNVVLESKYG+P+IVNDGVTVA+EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG IAEGVKVVAAGANPVLITRGIEKT+KALV+ELK+MSKEV+   L     +  G   ++G
Sbjct:    1 MASTFTATSSIGSMVAPNAHKTDKKLMNKLSSSS---------FGRRQNVFPKLRRSSPAVVCAAKELHFNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVAELKKMSKEVEDSELADVAAVSAGNNAEIG 213          

HSP 2 Score: 53.9138 bits (128), Expect = 1.436e-83
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 3
Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            MIAEAMS+VGRKG   L + K   + LY VEGMQFDRGY+ P
Sbjct:  215 MIAEAMSRVGRKGVVTLEEGKSAENALYVVEGMQFDRGYVSP 256          
BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3)

HSP 1 Score: 275.789 bits (704), Expect = 1.872e-83
Identity = 151/203 (74.38%), Postives = 166/203 (81.77%), Query Frame = 2
Query:   77 MASTFTAMSSISSMIAPNGRMTDXXXXXXXXXXXXXXXXXXXXFGRRQSVALRRARTPK--IYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            MASTFTA SSI SM+APNG  +D                    FGRRQSV  R  R+    + AAK+LHFNKDG  +++LQ GVNKLADLVGVTLGPKGRNVVLESKYG+P+IVNDGVTVA+EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG IAEGVKVVAAGANPVLITRGIEKT+KALV+ELK+MSKEV+
Sbjct:    1 MASTFTATSSIGSMVAPNGHKSDKKLISKLSSSS---------FGRRQSVCPRPRRSSSAIVCAAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEVE 194          

HSP 2 Score: 55.4546 bits (132), Expect = 1.872e-83
Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 3
Query:  735 DMIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +MIAEAMSKVGRKG   L + K   + LY VEGMQFDRGYI P
Sbjct:  214 NMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQFDRGYISP 256          
BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 6.473e-78
Identity = 140/169 (82.84%), Postives = 150/169 (88.76%), Query Frame = 2
Query:  233 RRARTPKIYA-AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVKIVNLPM*QLLVQGTTMKVG 736
            R+ R  K+ A AK+LHFNKDG A+KKLQNGVNKLADLVGVTLGPKGRNVVLESKYG+PKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALV+ELK+MSKEV+   L     +  G   +VG
Sbjct:   39 RKNRNVKVSAMAKELHFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVAELKKMSKEVEDSELADVAAVSAGNNHEVG 207          

HSP 2 Score: 54.6842 bits (130), Expect = 6.473e-78
Identity = 28/43 (65.12%), Postives = 32/43 (74.42%), Query Frame = 3
Query:  735 DMIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +MIAEA+SKVGRKG   L + K   + LY VEGMQFDRGYI P
Sbjct:  208 NMIAEALSKVGRKGVVTLEEGKSAENSLYVVEGMQFDRGYISP 250          
BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.219e-49
Identity = 88/112 (78.57%), Postives = 97/112 (86.61%), Query Frame = 2
Query:  401 PKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVKIVNLPM*QLLVQGTTMKVG 736
            P+IVNDGVTVA+EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKV+AAGANPV ITRGIEKT+KALV ELK+MSKEV+   L     +  G   ++G
Sbjct:    1 PQIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVIAAGANPVQITRGIEKTAKALVLELKKMSKEVEDSELADVAAVSAGNNYEIG 112          

HSP 2 Score: 52.373 bits (124), Expect = 3.219e-49
Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 3
Query:  735 DMIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +MIAEAMSKVGRKG   L + +   + LY VEGMQF+RGYI P
Sbjct:  113 NMIAEAMSKVGRKGVVTLEEGRSSENNLYVVEGMQFERGYISP 155          
BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 4.191e-49
Identity = 86/131 (65.65%), Postives = 107/131 (81.68%), Query Frame = 2
Query:  287 DGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            D  A + L+ GVN LAD V VTLGPKGRNVVLE K+GAP+IVNDGVT+AKE+ELEDP+EN GA+L+R+ A+KTND+AGDGTTT+ VLAQ LI EG++ VAAGANP+ + RG+EKT   LV E+  M+K V+
Sbjct:    8 DETARRALERGVNALADAVRVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDPLENTGAQLIREVASKTNDVAGDGTTTATVLAQALIREGLRNVAAGANPMSLKRGMEKTVAKLVQEIAAMAKPVE 138          

HSP 2 Score: 43.1282 bits (100), Expect = 4.191e-49
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 3
Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            MIAEAM KVG++G   + + K     L  VEGMQFD+GY+ P
Sbjct:  160 MIAEAMDKVGKEGVITVEESKSLVTELDVVEGMQFDKGYVSP 201          
BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_CALS8 (60 kDa chaperonin OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=groL PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 5.464e-49
Identity = 88/140 (62.86%), Postives = 118/140 (84.29%), Query Frame = 2
Query:  260 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AAK + F+++  A + L+ GVNKLAD V VTLGPKGRNVVLE K+G+P+IVNDGVT+AKE+ELEDP EN+GA++VR+ A+KTND+AGDGTTT+ VLAQ +I EG+K +AAGANP+++ RGI+K    +V E+K+MSK+V+
Sbjct:    2 AAKMILFDEE--ARRALERGVNKLADTVKVTLGPKGRNVVLEKKFGSPQIVNDGVTIAKEIELEDPFENMGAQIVREVASKTNDIAGDGTTTATVLAQAMIREGLKNIAAGANPMILRRGIQKAVDVVVDEIKKMSKKVR 139          

HSP 2 Score: 35.8094 bits (81), Expect = 5.464e-49
Identity = 19/40 (47.50%), Postives = 24/40 (60.00%), Query Frame = 3
Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYI 857
            ++A+AM KV   G   + + K     L  VEGMQFDRGYI
Sbjct:  160 LVADAMEKVTNDGVITVEESKTTETTLEIVEGMQFDRGYI 199          
BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.576e-48
Identity = 87/134 (64.93%), Postives = 108/134 (80.60%), Query Frame = 2
Query:  275 HFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV 676
            H   D  + + L+ GVN LAD V +TLGPKGRNVVLE K+GAP+I+NDGVT+AKEVELEDP+EN GA+L+R+ A+KTND+AGDGTTT+ VLAQ LI EG+K VAAGANPV + +GI+KT  ALV E++  SK V
Sbjct:    4 HVVFDEESRRALERGVNSLADAVRITLGPKGRNVVLEKKFGAPQIINDGVTIAKEVELEDPLENAGAQLMREVASKTNDVAGDGTTTATVLAQALIREGLKNVAAGANPVALRKGIDKTIDALVKEIEAKSKPV 137          

HSP 2 Score: 40.0466 bits (92), Expect = 1.576e-48
Identity = 21/42 (50.00%), Postives = 26/42 (61.90%), Query Frame = 3
Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            MIA+AM KVG+ G   + + K     +  VEGMQ DRGYI P
Sbjct:  159 MIAQAMDKVGKDGVITVEESKSLATEMEIVEGMQIDRGYISP 200          
BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_ANATD (60 kDa chaperonin OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=groL PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.679e-48
Identity = 86/140 (61.43%), Postives = 118/140 (84.29%), Query Frame = 2
Query:  260 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AAK + F+++  A + L+ GVNKLAD V VTLGPKGRNVVLE K+G+P+IVNDGVT+AKE+ELEDP EN+GA++VR+ A+KTND+AGDGTTT+ VLAQ +I EG+K +AAGANP+++ +GI+K    +V E+++MSK+V+
Sbjct:    2 AAKMILFDEE--ARRALERGVNKLADTVKVTLGPKGRNVVLEKKFGSPQIVNDGVTIAKEIELEDPFENMGAQIVREVASKTNDIAGDGTTTATVLAQAMIREGLKNIAAGANPMILRKGIQKAVDVVVEEIRKMSKKVR 139          

HSP 2 Score: 35.8094 bits (81), Expect = 2.679e-48
Identity = 19/40 (47.50%), Postives = 24/40 (60.00%), Query Frame = 3
Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYI 857
            ++A+AM KV   G   + + K     L  VEGMQFDRGYI
Sbjct:  160 LVADAMEKVTNDGVITVEESKTTETTLEIVEGMQFDRGYI 199          
BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_GEOTN (60 kDa chaperonin OS=Geobacillus thermodenitrificans (strain NG80-2) GN=groL PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 5.931e-48
Identity = 88/139 (63.31%), Postives = 110/139 (79.14%), Query Frame = 2
Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AK++ F+++  A + +  GV+KLAD V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELEDP EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K VAAGANP+ I RGIEK     V ELK +SK +K
Sbjct:    2 AKEIKFSEE--ARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVAAGANPMGIRRGIEKAVAVAVEELKAISKPIK 138          

HSP 2 Score: 40.4318 bits (93), Expect = 5.931e-48
Identity = 22/42 (52.38%), Postives = 26/42 (61.90%), Query Frame = 3
Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY+ P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYVSP 200          
BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_GEOKA (60 kDa chaperonin OS=Geobacillus kaustophilus GN=groL PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.007e-47
Identity = 88/139 (63.31%), Postives = 109/139 (78.42%), Query Frame = 2
Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AK + F+++  A + +  GV+KLAD V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELEDP EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K VAAGANP+ I RGIEK     V ELK +SK +K
Sbjct:    2 AKQIKFSEE--ARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVAAGANPMGIRRGIEKAVAVAVEELKAISKPIK 138          

HSP 2 Score: 40.4318 bits (93), Expect = 1.007e-47
Identity = 22/42 (52.38%), Postives = 26/42 (61.90%), Query Frame = 3
Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY+ P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYVSP 200          
The following BLAST results are available for this feature:
BLAST of EY664080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RUBB_BRANA1.436e-8369.82RuBisCO large subunit-binding protein subunit beta... [more]
RUBB_ARATH1.872e-8374.38RuBisCO large subunit-binding protein subunit beta... [more]
RUBB_PEA6.473e-7882.84RuBisCO large subunit-binding protein subunit beta... [more]
RUBB_SECCE3.219e-4978.57RuBisCO large subunit-binding protein subunit beta... [more]
CH602_GLOVI4.191e-4965.6560 kDa chaperonin 2 OS=Gloeobacter violaceus GN=gr... [more]
CH60_CALS85.464e-4962.8660 kDa chaperonin OS=Caldicellulosiruptor saccharo... [more]
CH601_ACAM11.576e-4864.9360 kDa chaperonin 1 OS=Acaryochloris marina (strai... [more]
CH60_ANATD2.679e-4861.4360 kDa chaperonin OS=Anaerocellum thermophilum (st... [more]
CH60_GEOTN5.931e-4863.3160 kDa chaperonin OS=Geobacillus thermodenitrifica... [more]
CH60_GEOKA1.007e-4763.3160 kDa chaperonin OS=Geobacillus kaustophilus GN=g... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-062-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664080 ID=EY664080; Name=EY664080; organism=Citrus sinensis; type=EST; length=905bp
TTCGTCGACCCACGCGTCCGCTCTTTAAATCCTAAAACTCTCGCACTTTC
CGCCGTCTCACAGTTTAAACGAATAAATGGCGTCGACTTTCACTGCCATG
TCTTCCATTAGCTCCATGATTGCTCCTAATGGACGAATGACTGATAAGAA
GCTTGCATCTTCTTCGAACAAATTGTCATCACTTGCTTCCATTTCTTCAA
GTTCATTCGGCAGGAGACAGAGTGTAGCTCTACGCAGGGCCCGCACACCT
AAGATTTATGCGGCAAAGGACTTGCATTTCAACAAGGATGGATATGCCAT
GAAGAAACTTCAAAATGGTGTCAACAAGCTTGCAGATCTAGTTGGAGTTA
CCCTTGGTCCCAAGGGCAGGAATGTTGTTCTAGAGAGCAAGTACGGTGCC
CCAAAAATTGTGAATGATGGTGTAACTGTGGCCAAAGAAGTTGAGTTAGA
GGACCCGGTTGAGAACATTGGTGCTAAATTAGTGAGACAAGCAGCTGCCA
AGACTAATGACTTGGCTGGTGATGGAACAACAACATCTGTTGTTCTTGCG
CAAGGGCTTATAGCTGAAGGTGTTAAGGTCGTGGCAGCTGGTGCAAATCC
TGTTCTTATCACAAGAGGCATTGAGAAGACATCTAAGGCTCTTGTTTCTG
AGCTCAAGCAGATGTCAAAAGAGGTGAAGATAGTGAACTTGCCGATGTAG
CAGCTGTTAGTGCAGGGAACAACTATGAAAGTGGGATATGATTGCAGAAG
CCATGAGTAAAGTGGGACGTAAGGGTTGTGGTGACCTTTGGAAGAGGAAA
AAGTGCTGAGATATGCTCTATGNTGTTGAGGGAATGCAATTTGATCGGGG
NTATATTCTCCCTACTTCNCACTGATAGGGAGAAATGGGCAGTGATATTG
AAACT
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