EY664077

Overview
NameEY664077
Unique NameEY664077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664077 vs. ExPASy Swiss-Prot
Match: KPPR_ARATH (Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana GN=At1g32060 PE=1 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 3.299e-80
Identity = 145/161 (90.06%), Postives = 152/161 (94.41%), Query Frame = 3
Query:   24 QQYAYAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAPVEAKA 506
            +QYA AVIEVLPT LIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTI WIPCGRKLTCSYPGIKF+Y PD+YF HEVS+LEMDG+FDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQ+I +KA A  EAKA
Sbjct:  235 KQYADAVIEVLPTTLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFNYEPDSYFDHEVSVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQLIANKATARAEAKA 395          
BLAST of EY664077 vs. ExPASy Swiss-Prot
Match: KPPR_WHEAT (Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 5.628e-80
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 3
Query:   24 QQYAYAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAPVEA 500
            +QYA AVIEVLPTQLIPDDNEGKVLRV+LIMKEG+K+F+PVYLFDEGSTI WIPCGRKLTCSYPGIKFSYGPD YFG EVS+LEMDG+FDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQII  +A  P EA
Sbjct:  243 KQYADAVIEVLPTQLIPDDNEGKVLRVKLIMKEGIKFFNPVYLFDEGSTINWIPCGRKLTCSYPGIKFSYGPDTYFGQEVSVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIIAERAGVPAEA 401          
BLAST of EY664077 vs. ExPASy Swiss-Prot
Match: KPPR_MESCR (Phosphoribulokinase, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.414e-77
Identity = 139/159 (87.42%), Postives = 148/159 (93.08%), Query Frame = 3
Query:   24 QQYAYAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAPVEA 500
            +QYA AVIEVLPTQLIP DNEGKVLRVRLI KEGV+YFSPVYLFDEGS+I WIPCGRKLTCSYPGIKF YGPD YFG+EV++LEMDG+FDRLDELIYVESHLSNLSTKFYGEVTQQMLKH DFPGSNNGTGLFQTIVGLKIRDL+EQ+I SK AAP  A
Sbjct:  236 KQYADAVIEVLPTQLIPGDNEGKVLRVRLIQKEGVQYFSPVYLFDEGSSITWIPCGRKLTCSYPGIKFFYGPDTYFGNEVTVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHQDFPGSNNGTGLFQTIVGLKIRDLFEQLIASKTAAPAAA 394          
BLAST of EY664077 vs. ExPASy Swiss-Prot
Match: KPPR_SPIOL (Phosphoribulokinase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.939e-72
Identity = 126/159 (79.25%), Postives = 146/159 (91.82%), Query Frame = 3
Query:   24 QQYAYAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAPVEA 500
            +Q+A  VIEVLPT+LIPDD+EGKVLRVR+I KEGVK+F+PVYLFDEGSTI WIPCGRKLTCSYPGIKFSYGPD ++G+EV+++EMDG FDRLDELIYVESHLSNLSTKFYGEVTQQMLKH +FPGSNNGTG FQTI+GLKIRDL+EQ++ S++ A   A
Sbjct:  241 KQHADVVIEVLPTELIPDDDEGKVLRVRMIQKEGVKFFNPVYLFDEGSTISWIPCGRKLTCSYPGIKFSYGPDTFYGNEVTVVEMDGMFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHQNFPGSNNGTGFFQTIIGLKIRDLFEQLVASRSTATATA 399          
BLAST of EY664077 vs. ExPASy Swiss-Prot
Match: KPPR_CHLRE (Phosphoribulokinase, chloroplastic OS=Chlamydomonas reinhardtii GN=PRKA PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.103e-62
Identity = 113/151 (74.83%), Postives = 133/151 (88.08%), Query Frame = 3
Query:   42 VIEVLPTQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAPV 494
            +I+VLPTQL+PDD +G+ LRVRLIMKEG K F PVYLFDEGSTI WIPCGRKLTCS+PGIK  YGPD ++G EVS+LEMDG+FD+L+ELIYVESHLSN S KFYGE+TQQMLK++ FPGSNNGTGLFQTIVGLK+R++YE+I+  K   PV
Sbjct:  227 IIQVLPTQLVPDD-KGQYLRVRLIMKEGSKMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMFYGPDTWYGQEVSVLEMDGQFDKLEELIYVESHLSNTSAKFYGEITQQMLKNSGFPGSNNGTGLFQTIVGLKVREVYERIV-KKDVVPV 375          
BLAST of EY664077 vs. ExPASy Swiss-Prot
Match: KPPR_SYNY3 (Phosphoribulokinase OS=Synechocystis sp. (strain PCC 6803) GN=prk PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.948e-56
Identity = 100/156 (64.10%), Postives = 132/156 (84.62%), Query Frame = 3
Query:   24 QQYAYAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAP 491
            +QYA  VI+VLPT+LI +D E K+LRVRL+ KEGVK+F P YLFDEGSTI+W PCGRKLTC+YPGIK  YGPD + G+EVS+LE+DG+F+ L+E++YVE+HLS   TK+YGE+T+ +LKH D+PG++NGTGLFQ +VGLK+R +YEQ +T++A  P
Sbjct:  176 KQYADVVIQVLPTRLI-EDKESKLLRVRLVQKEGVKFFEPAYLFDEGSTIDWRPCGRKLTCTYPGIKMYYGPDNFMGNEVSLLEVDGRFENLEEMVYVENHLSKTGTKYYGEMTELLLKHKDYPGTDNGTGLFQVLVGLKMRKVYEQ-LTAEAKVP 329          
The following BLAST results are available for this feature:
BLAST of EY664077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
KPPR_ARATH3.299e-8090.06Phosphoribulokinase, chloroplastic OS=Arabidopsis ... [more]
KPPR_WHEAT5.628e-8089.31Phosphoribulokinase, chloroplastic OS=Triticum aes... [more]
KPPR_MESCR3.414e-7787.42Phosphoribulokinase, chloroplastic OS=Mesembryanth... [more]
KPPR_SPIOL1.939e-7279.25Phosphoribulokinase, chloroplastic OS=Spinacia ole... [more]
KPPR_CHLRE3.103e-6274.83Phosphoribulokinase, chloroplastic OS=Chlamydomona... [more]
KPPR_SYNY31.948e-5664.10Phosphoribulokinase OS=Synechocystis sp. (strain P... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-062-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664077 ID=EY664077; Name=EY664077; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGTATTGATCCTCACAGCAATATGCTTATGCAGTGATTGAA
GTGTTACCAACCCAGTTGATTCCGGATGATAATGAAGGAAAGGTTTTGAG
AGTTAGGTTGATCATGAAAGAAGGAGTGAAGTACTTCAGCCCGGTTTATC
TGTTTGATGAAGGATCAACTATCGAATGGATACCTTGCGGAAGGAAGCTT
ACATGTTCTTACCCCGGCATCAAATTCTCTTATGGCCCTGACGCTTACTT
TGGCCATGAGGTCTCGATTTTGGAAATGGATGGGAAATTTGACAGGTTAG
ATGAGCTAATTTATGTCGAAAGCCATCTAAGCAACTTATCAACCAAGTTC
TATGGAGAAGTCACCCAGCAAATGTTGAAGCATGCCGATTTCCCTGGCAG
CAACAACGGAACCGGTCTCTTCCAAACTATAGTTGGATTAAAGATTAGGG
ATCTCTACGAACAAATCATCACCAGCAAGGCTGCGGCTCCGGTAGAAGCG
AAAGCTTAAACACTGCCTTGTAATATTAAACAAGGCAACACAGATAAGTT
GCCAAAAATCCATCTATTCTTTTCCGAGTCCCTTTTCTTGTTTCAGTTGA
GTGCTAGGCCAGCATTTTCCTCTTAAGATACTCCTATGAATGTATTTATT
TCATGGTGNAATCTATGAACACTTTGNNTATAACTCAATATAAAAATGCC
AAAGCAGAGATGAAATTCATCCAGAAGTGCTCATAGGCATTAAGTTGGAG
CCGCTTCGAATTATACTCTTCTCCTCTTTCATCAGTATAATAATCAACCC
TCGGTTCTACCCGAATGGCCAGGGTTGCTGCCCTTTCAACCCCACAAAAG
GATGGTGGGGGATTTCCTTCTCAATTAATTGGAAG
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