EY744565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_RAT (26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus GN=Psmd1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.407e-53 Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2 Query: 38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 637 T D FLR+NL+WL+RATNWAKF+ATA LGVIH+GH ++ LMA YALGLIHANHG I +L + L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR Sbjct: 381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL--YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNTQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILR 579 HSP 2 Score: 41.9726 bits (97), Expect = 1.407e-53 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 3 Query: 645 GMYALALAYRGTANNKAIPQLLHFAVSD 728 GMY +A+AY G+ NNKAI +LLH AVSD Sbjct: 582 GMYTVAMAYCGSGNNKAIRRLLHVAVSD 609
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_PONAB (26S proteasome non-ATPase regulatory subunit 1 OS=Pongo abelii GN=PSMD1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.407e-53 Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2 Query: 38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 637 T D FLR+NL+WL+RATNWAKF+ATA LGVIH+GH ++ LMA YALGLIHANHG I +L + L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR Sbjct: 381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL--YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILR 579 HSP 2 Score: 41.9726 bits (97), Expect = 1.407e-53 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 3 Query: 645 GMYALALAYRGTANNKAIPQLLHFAVSD 728 GMY +A+AY G+ NNKAI +LLH AVSD Sbjct: 582 GMYTVAMAYCGSGNNKAIRRLLHVAVSD 609
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_MOUSE (26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus GN=Psmd1 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.407e-53 Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2 Query: 38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 637 T D FLR+NL+WL+RATNWAKF+ATA LGVIH+GH ++ LMA YALGLIHANHG I +L + L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR Sbjct: 381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL--YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILR 579 HSP 2 Score: 41.9726 bits (97), Expect = 1.407e-53 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 3 Query: 645 GMYALALAYRGTANNKAIPQLLHFAVSD 728 GMY +A+AY G+ NNKAI +LLH AVSD Sbjct: 582 GMYTVAMAYCGSGNNKAIRRLLHVAVSD 609
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_HUMAN (26S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens GN=PSMD1 PE=1 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 1.407e-53 Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2 Query: 38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 637 T D FLR+NL+WL+RATNWAKF+ATA LGVIH+GH ++ LMA YALGLIHANHG I +L + L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR Sbjct: 381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL--YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILR 579 HSP 2 Score: 41.9726 bits (97), Expect = 1.407e-53 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 3 Query: 645 GMYALALAYRGTANNKAIPQLLHFAVSD 728 GMY +A+AY G+ NNKAI +LLH AVSD Sbjct: 582 GMYTVAMAYCGSGNNKAIRRLLHVAVSD 609
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_CHICK (26S proteasome non-ATPase regulatory subunit 1 OS=Gallus gallus GN=PSMD1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.407e-53 Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2 Query: 38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 637 T D FLR+NL+WL+RATNWAKF+ATA LGVIH+GH ++ LMA YALGLIHANHG I +L + L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR Sbjct: 381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL--YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILR 579 HSP 2 Score: 41.9726 bits (97), Expect = 1.407e-53 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 3 Query: 645 GMYALALAYRGTANNKAIPQLLHFAVSD 728 GMY +A+AY G+ NNKAI +LLH AVSD Sbjct: 582 GMYTVAMAYCGSGNNKAIRRLLHVAVSD 609
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: RPN2_SCHPO (26S proteasome regulatory subunit rpn2 OS=Schizosaccharomyces pombe GN=rpn2 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.568e-52 Identity = 103/214 (48.13%), Postives = 137/214 (64.02%), Query Frame = 2 Query: 44 DTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGRNVCIGIGLQGNS 682 D+F R+NL WLS+A NW+KF+ATA LGVIHRG+ Q +++ P YA+GLIHANHG G+ ++LR+ L+ T E++Q+ DE +Y+ +K +L+ D+AVAG AAGISMGL+M+GTAS A EML YAHETQHEKIIRGL +GIAL VYGR++EAD +I+++ D DP LRY + G S Sbjct: 365 DSFFRDNLSWLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEEDAPSSSTYSEGGAF-YAMGLIHANHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGMASRDETLYESVKTILFNDNAVAGSAAGISMGLIMLGTASSAAIDEMLQYAHETQHEKIIRGLGIGIALIVYGRQQEADGIIKELNNDLDPTLRYAGMFATALAYCGTS 577
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_DICDI (26S proteasome non-ATPase regulatory subunit 1 OS=Dictyostelium discoideum GN=psmD1 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.905e-47 Identity = 98/214 (45.79%), Postives = 137/214 (64.02%), Query Frame = 2 Query: 38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGRNVCIGIGLQG 676 T DTFLR N++WL ++T+W KFSA + LGVI++GH+++ +SL+ YALGLIHA+HGE I +L + L N ++ H +D+Y+D+K+VLY D AV+GEAAG++MGL+M+G+ ++KA EML YAHETQHEK IR L++G+A +YG+EE ADTLIEQM D+DP++RYG I G Sbjct: 371 TRDTFLRSNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLKTYLPGASVNQTPYSESGSL--YALGLIHASHGEEIIDYLVEKLHINNA-ILHHGASLGLGLAAMATGRDDLYEDLKSVLYNDDAVSGEAAGLAMGLVMLGSGAKKAIEEMLAYAHETQHEKTIRSLSMGLAFLMYGKEESADTLIEQMIGDKDPLIRYGGMYAIAFAYCG 581
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_DROME (26S proteasome non-ATPase regulatory subunit 1 OS=Drosophila melanogaster GN=Rpn2 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.574e-44 Identity = 97/214 (45.33%), Postives = 130/214 (60.75%), Query Frame = 2 Query: 38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGRNVCIGIGLQG 676 T D FLR+NLDWL+RATNWAK +ATA LGVIHRGH + +LM YALGLIHANHG I +L L+ E ++H +D+Y+ +K LY D AV GEAAGI+MG++M+G+ + +A E M++YA ETQHEKI+RGLA+GI+LT++ R EEAD L+ ++ D+DP+LR I + G Sbjct: 396 TSDQFLRDNLDWLARATNWAKLTATASLGVIHRGHEKDSLALMQSYLPKEAGPSSGYSEGGAL--YALGLIHANHGANIIDYLLQQLKDAQNENVRHGGCLGLGLAGMGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQAIEDMVSYAQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDPVLRRSGMYTIAMAYNG 607
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: RPN2_YEAST (26S proteasome regulatory subunit RPN2 OS=Saccharomyces cerevisiae GN=RPN2 PE=1 SV=4) HSP 1 Score: 152.525 bits (384), Expect = 3.370e-36 Identity = 86/221 (38.91%), Postives = 123/221 (55.66%), Query Frame = 2 Query: 38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSL-------RSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGRNVCIGIGLQG 676 T ++F++ NL WL +A NWAKF+ATA LGVIH+G+L +G+ +MAP Y LGLI+A G +L++ + +V+V+ H + ++Y+ +K VLY DSA +GEAA + MGL M+GT +A +M TY+ ETQH I RGLA+G+AL YGR+E AD LI +M + +LRYG I + G Sbjct: 344 TDNSFIKANLPWLGKAQNWAKFTATASLGVIHKGNLLEGKKVMAP---YLPGSRASSRFIKGGSLYGLGLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQELADDLITKMLASDESLLRYGGAFTIALAYAG 561
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: RPN2_CANGA (26S proteasome regulatory subunit RPN2 OS=Candida glabrata GN=RPN2 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.672e-35 Identity = 83/221 (37.56%), Postives = 122/221 (55.20%), Query Frame = 2 Query: 38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSL-------RSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGRNVCIGIGLQG 676 T ++F++ NL WL +A NWAKFSATA LGVIH+G+L G+ +MAP Y LGLI+A G I +L+ L +V+V+ H + ++Y+ +K+VLY D A +GEAA +GL ++GT E A ++ TYA ET H I RGL++ +AL YGR+E+AD LI++M ++ ++RYG I + G Sbjct: 341 TDNSFIKANLSWLGKAQNWAKFSATASLGVIHKGNLIDGKKVMAP---YLPGSRSSSRFIKGGSLYGLGLIYAGFGRDIVDYLKTHLIENSGTTGDEDVDVLLHGASLGVGLAAMGTANNEVYEALKDVLYNDVATSGEAAAFGIGLTLLGTGDETAINDLFTYAQETSHGNITRGLSMALALINYGRQEQADELIDKMLASENSLIRYGGAFSIALAYVG 558 The following BLAST results are available for this feature:
BLAST of EY744565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744565 ID=EY744565; Name=EY744565; organism=Citrus sinensis; type=EST; length=971bpback to top |