EY744565

Overview
NameEY744565
Unique NameEY744565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length971
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_RAT (26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus GN=Psmd1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.407e-53
Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2
Query:   38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 637
            T D FLR+NL+WL+RATNWAKF+ATA LGVIH+GH ++   LMA                     YALGLIHANHG  I  +L + L++ + ++++H               +D+YD +K  LY D AV GEAAG+++GL+M+G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR
Sbjct:  381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL--YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNTQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILR 579          

HSP 2 Score: 41.9726 bits (97), Expect = 1.407e-53
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 3
Query:  645 GMYALALAYRGTANNKAIPQLLHFAVSD 728
            GMY +A+AY G+ NNKAI +LLH AVSD
Sbjct:  582 GMYTVAMAYCGSGNNKAIRRLLHVAVSD 609          
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_PONAB (26S proteasome non-ATPase regulatory subunit 1 OS=Pongo abelii GN=PSMD1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.407e-53
Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2
Query:   38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 637
            T D FLR+NL+WL+RATNWAKF+ATA LGVIH+GH ++   LMA                     YALGLIHANHG  I  +L + L++ + ++++H               +D+YD +K  LY D AV GEAAG+++GL+M+G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR
Sbjct:  381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL--YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILR 579          

HSP 2 Score: 41.9726 bits (97), Expect = 1.407e-53
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 3
Query:  645 GMYALALAYRGTANNKAIPQLLHFAVSD 728
            GMY +A+AY G+ NNKAI +LLH AVSD
Sbjct:  582 GMYTVAMAYCGSGNNKAIRRLLHVAVSD 609          
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_MOUSE (26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus GN=Psmd1 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.407e-53
Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2
Query:   38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 637
            T D FLR+NL+WL+RATNWAKF+ATA LGVIH+GH ++   LMA                     YALGLIHANHG  I  +L + L++ + ++++H               +D+YD +K  LY D AV GEAAG+++GL+M+G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR
Sbjct:  381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL--YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILR 579          

HSP 2 Score: 41.9726 bits (97), Expect = 1.407e-53
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 3
Query:  645 GMYALALAYRGTANNKAIPQLLHFAVSD 728
            GMY +A+AY G+ NNKAI +LLH AVSD
Sbjct:  582 GMYTVAMAYCGSGNNKAIRRLLHVAVSD 609          
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_HUMAN (26S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens GN=PSMD1 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.407e-53
Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2
Query:   38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 637
            T D FLR+NL+WL+RATNWAKF+ATA LGVIH+GH ++   LMA                     YALGLIHANHG  I  +L + L++ + ++++H               +D+YD +K  LY D AV GEAAG+++GL+M+G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR
Sbjct:  381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL--YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILR 579          

HSP 2 Score: 41.9726 bits (97), Expect = 1.407e-53
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 3
Query:  645 GMYALALAYRGTANNKAIPQLLHFAVSD 728
            GMY +A+AY G+ NNKAI +LLH AVSD
Sbjct:  582 GMYTVAMAYCGSGNNKAIRRLLHVAVSD 609          
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_CHICK (26S proteasome non-ATPase regulatory subunit 1 OS=Gallus gallus GN=PSMD1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.407e-53
Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2
Query:   38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 637
            T D FLR+NL+WL+RATNWAKF+ATA LGVIH+GH ++   LMA                     YALGLIHANHG  I  +L + L++ + ++++H               +D+YD +K  LY D AV GEAAG+++GL+M+G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR
Sbjct:  381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL--YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILR 579          

HSP 2 Score: 41.9726 bits (97), Expect = 1.407e-53
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 3
Query:  645 GMYALALAYRGTANNKAIPQLLHFAVSD 728
            GMY +A+AY G+ NNKAI +LLH AVSD
Sbjct:  582 GMYTVAMAYCGSGNNKAIRRLLHVAVSD 609          
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: RPN2_SCHPO (26S proteasome regulatory subunit rpn2 OS=Schizosaccharomyces pombe GN=rpn2 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.568e-52
Identity = 103/214 (48.13%), Postives = 137/214 (64.02%), Query Frame = 2
Query:   44 DTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGRNVCIGIGLQGNS 682
            D+F R+NL WLS+A NW+KF+ATA LGVIHRG+  Q  +++ P                    YA+GLIHANHG G+ ++LR+ L+ T  E++Q+              DE +Y+ +K +L+ D+AVAG AAGISMGL+M+GTAS  A  EML YAHETQHEKIIRGL +GIAL VYGR++EAD +I+++  D DP LRY       +   G S
Sbjct:  365 DSFFRDNLSWLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEEDAPSSSTYSEGGAF-YAMGLIHANHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGMASRDETLYESVKTILFNDNAVAGSAAGISMGLIMLGTASSAAIDEMLQYAHETQHEKIIRGLGIGIALIVYGRQQEADGIIKELNNDLDPTLRYAGMFATALAYCGTS 577          
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_DICDI (26S proteasome non-ATPase regulatory subunit 1 OS=Dictyostelium discoideum GN=psmD1 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.905e-47
Identity = 98/214 (45.79%), Postives = 137/214 (64.02%), Query Frame = 2
Query:   38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGRNVCIGIGLQG 676
            T DTFLR N++WL ++T+W KFSA + LGVI++GH+++ +SL+                      YALGLIHA+HGE I  +L + L   N  ++ H               +D+Y+D+K+VLY D AV+GEAAG++MGL+M+G+ ++KA  EML YAHETQHEK IR L++G+A  +YG+EE ADTLIEQM  D+DP++RYG    I     G
Sbjct:  371 TRDTFLRSNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLKTYLPGASVNQTPYSESGSL--YALGLIHASHGEEIIDYLVEKLHINNA-ILHHGASLGLGLAAMATGRDDLYEDLKSVLYNDDAVSGEAAGLAMGLVMLGSGAKKAIEEMLAYAHETQHEKTIRSLSMGLAFLMYGKEESADTLIEQMIGDKDPLIRYGGMYAIAFAYCG 581          
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: PSMD1_DROME (26S proteasome non-ATPase regulatory subunit 1 OS=Drosophila melanogaster GN=Rpn2 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.574e-44
Identity = 97/214 (45.33%), Postives = 130/214 (60.75%), Query Frame = 2
Query:   38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGRNVCIGIGLQG 676
            T D FLR+NLDWL+RATNWAK +ATA LGVIHRGH +   +LM                      YALGLIHANHG  I  +L   L+    E ++H               +D+Y+ +K  LY D AV GEAAGI+MG++M+G+ + +A E M++YA ETQHEKI+RGLA+GI+LT++ R EEAD L+  ++ D+DP+LR      I +   G
Sbjct:  396 TSDQFLRDNLDWLARATNWAKLTATASLGVIHRGHEKDSLALMQSYLPKEAGPSSGYSEGGAL--YALGLIHANHGANIIDYLLQQLKDAQNENVRHGGCLGLGLAGMGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQAIEDMVSYAQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDPVLRRSGMYTIAMAYNG 607          
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: RPN2_YEAST (26S proteasome regulatory subunit RPN2 OS=Saccharomyces cerevisiae GN=RPN2 PE=1 SV=4)

HSP 1 Score: 152.525 bits (384), Expect = 3.370e-36
Identity = 86/221 (38.91%), Postives = 123/221 (55.66%), Query Frame = 2
Query:   38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSL-------RSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGRNVCIGIGLQG 676
            T ++F++ NL WL +A NWAKF+ATA LGVIH+G+L +G+ +MAP                    Y LGLI+A  G     +L++ +          +V+V+ H              + ++Y+ +K VLY DSA +GEAA + MGL M+GT   +A  +M TY+ ETQH  I RGLA+G+AL  YGR+E AD LI +M    + +LRYG    I +   G
Sbjct:  344 TDNSFIKANLPWLGKAQNWAKFTATASLGVIHKGNLLEGKKVMAP---YLPGSRASSRFIKGGSLYGLGLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQELADDLITKMLASDESLLRYGGAFTIALAYAG 561          
BLAST of EY744565 vs. ExPASy Swiss-Prot
Match: RPN2_CANGA (26S proteasome regulatory subunit RPN2 OS=Candida glabrata GN=RPN2 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.672e-35
Identity = 83/221 (37.56%), Postives = 122/221 (55.20%), Query Frame = 2
Query:   38 TVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSL-------RSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGRNVCIGIGLQG 676
            T ++F++ NL WL +A NWAKFSATA LGVIH+G+L  G+ +MAP                    Y LGLI+A  G  I  +L+  L          +V+V+ H              + ++Y+ +K+VLY D A +GEAA   +GL ++GT  E A  ++ TYA ET H  I RGL++ +AL  YGR+E+AD LI++M   ++ ++RYG    I +   G
Sbjct:  341 TDNSFIKANLSWLGKAQNWAKFSATASLGVIHKGNLIDGKKVMAP---YLPGSRSSSRFIKGGSLYGLGLIYAGFGRDIVDYLKTHLIENSGTTGDEDVDVLLHGASLGVGLAAMGTANNEVYEALKDVLYNDVATSGEAAAFGIGLTLLGTGDETAINDLFTYAQETSHGNITRGLSMALALINYGRQEQADELIDKMLASENSLIRYGGAFSIALAYVG 558          
The following BLAST results are available for this feature:
BLAST of EY744565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PSMD1_RAT1.407e-5349.7526S proteasome non-ATPase regulatory subunit 1 OS=... [more]
PSMD1_PONAB1.407e-5349.7526S proteasome non-ATPase regulatory subunit 1 OS=... [more]
PSMD1_MOUSE1.407e-5349.7526S proteasome non-ATPase regulatory subunit 1 OS=... [more]
PSMD1_HUMAN1.407e-5349.7526S proteasome non-ATPase regulatory subunit 1 OS=... [more]
PSMD1_CHICK1.407e-5349.7526S proteasome non-ATPase regulatory subunit 1 OS=... [more]
RPN2_SCHPO2.568e-5248.1326S proteasome regulatory subunit rpn2 OS=Schizosa... [more]
PSMD1_DICDI1.905e-4745.7926S proteasome non-ATPase regulatory subunit 1 OS=... [more]
PSMD1_DROME2.574e-4445.3326S proteasome non-ATPase regulatory subunit 1 OS=... [more]
RPN2_YEAST3.370e-3638.9126S proteasome regulatory subunit RPN2 OS=Saccharo... [more]
RPN2_CANGA1.672e-3537.5626S proteasome regulatory subunit RPN2 OS=Candida ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-002-A07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744565 ID=EY744565; Name=EY744565; organism=Citrus sinensis; type=EST; length=971bp
CCACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGCAACTGTGGACACAT
TTCTTAGGGAGAATCTGGACTGGTTGAGCAGAGCCACCAATTGGGCCAAG
TTTAGTGCAACGGCAGGGCTAGGTGTTATTCACAGAGGCCATCTGCAGCA
AGGAAGGTCACTTATGGCACCTTACTTGCCCCAGGGCGGGGCTGGTGGTG
GCGGCAGTCCGTACTCAGAAGGTGGAGCTCTTTATGCCTTAGGTCTCATT
CATGCCAACCATGGCGAGGGCATCAAACAATTCCTTCGTGATAGCCTAAG
GAGTACTAATGTGGAGGTTATTCAACATGGTGCTTGCTTAGGGCTTGGCT
TGGCAGCTCTAGGAACTGCTGATGAAGATATCTATGATGACATAAAAAAT
GTGCTTTATACTGACAGTGCTGTTGCTGGAGAAGCTGCTGGGATAAGTAT
GGGTTTGCTCATGGTTGGAACCGCTAGTGAGAAGGCAGGTGAAATGCTTA
CCTATGCACATGAGACGCAGCATGAGAAGATCATCAGGGGGTTGGCATTG
GGTATTGCTCTAACTGTGTATGGAAGGGAAGAAGAAGCAGATACATTAAT
TGAGCAAATGACTCGCGATCAAGATCCAATACTGCGTTATGGGAGGAATG
TATGCATTGGCATTGGCCTACAGGGGAACAGCTAACAACAAGGCGATTCC
CCAGCTGCTGCACTTTGCCGTATCCGATGGTGAATGATGATGGTCGGGAG
ACCCCTGTTCTACCCCTTGGTTTTTGTCCTGGACTCTGAACCCGAACCAA
AACCCCCAAATTGGTGGCCCCCGGCTGCCTAAAACCAAAAAAACCCCACT
TTTTCCCATAGGGGGGGGGCTCTTTGGCATAAAGAATTCCCCCTGGGGGG
GGGAAAAAGGGAAGAAAAACCAAGGGTTATTTTTCTTTTTGGGGGGGAAC
CCCCCTTTTAAACACAAAAAA
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