EY744552

Overview
NameEY744552
Unique NameEY744552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length959
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744552 vs. ExPASy Swiss-Prot
Match: Y1491_ARATH (DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.147e-27
Identity = 68/159 (42.77%), Postives = 98/159 (61.64%), Query Frame = 1 
Query:   37 LGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLR-YAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDAHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFLPTYDG 510
            L   +V  L+ +G F+++HLR+EMDMLAF+GC     +   EE K LR Y    + +K ++  ERR+ G CPLTPEE  L+L+A+  D    IY+AAGE++GGE+ +   R  FPR+      +DP+E     +     +A+D+MV   SDIF+PTYDG
Sbjct:  242 LSESIVDKLRSQGHFMSIHLRFEMDMLAFAGCF---DIFNPEEQKILRKYRKENFADKRLIYNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRL-DNHSSVDPSEELSATSQGLIGSAVDYMVCLLSDIFMPTYDG 396
The following BLAST results are available for this feature:
BLAST of EY744552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1491_ARATH2.147e-2742.77DUF246 domain-containing protein At1g04910 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-H02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744552 ID=EY744552; Name=EY744552; organism=Citrus sinensis; type=EST; length=959bp
CCCGCGTCCGCGGACGCGTGGGCGGACGCGTGGGCTCTGGGATACGAATT
GGTTCGTATACTTCAAGAAAAGGGACCTTTTGTGGCTTTGCATCTGAGAT
ATGAGATGGACATGTTGGCTTTCTCAGGTTGTACACATGGCTGCTCCATG
GGAGAAGCAGAGGAACTGAAGCGGTTGAGATATGCATACCCATGGTGGAG
AGAGAAAGAAATAGTTTCAGAGGAGAGGAGATCACAAGGTCTCTGTCCTT
TGACTCCAGAGGAGGCTGCACTAGTTTTGCAAGCATTGGGTATCGATAAG
GATGCACATATCTATATTGCAGCTGGTGAGATTTATGGCGGGGAAAAGAG
ACTTGCAGCACTAAGAGCTGCATTTCCACGGATTGTGAGAAAAGAAATGC
TGTTAGATCCGGCAGAACTACAACTGTTTCAGAATCATTCATCTCAAATG
GCAGCCCTGGATTTTATGGTTTCTACTGCTAGTGATATTTTTCTTCCTAC
ATATGATGGGGAACATGGGCAAAATTTGTGGAGGGTCACCGCAGGTATCT
TGGCGTTCAACAAGGTCCATATTATTATATTCGGAAAACACCTGGGAAGG
GCTGCTGGGAAATGCAATTACCAATGGGACCTCCTTCCTTTTGATGGAAT
TATAGATTTTGCTGTTGGCGGCCACAAAACAAAAAAAATGCGAGGCGACC
CACCCAGCCCGCCCACGCGGTACTTACGCGCACCCACCCCCCGGAGAGAC
AAATATTTCTTATTTGCAACCCCCCCAGGGATTCGCATTTTGCCAAGAGA
AACACAAGAACGCATCTCGCACGCACATCGGCCCCCGACAACAACCCAGC
AGTCCGACATCGAAAGGTCAGGCCCCAACAACCGCACATATTCTCTTCGA
GACTACCCGCGGATGGCGACACCCACCACATGATCGCGGCACCCCAATAC
AGCGATGAG
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