EY663946

Overview
NameEY663946
Unique NameEY663946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663946 vs. ExPASy Swiss-Prot
Match: LPAT2_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=LPAT2 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.835e-32
Identity = 69/109 (63.30%), Postives = 82/109 (75.23%), Query Frame = 1
Query:  151 FCT*DALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAFGLGIVTVLMQILIRFSQSERSTPAKVVPSKPKNSKEPEQTTQ 477
            F   DALLDKH A DTF  Q+ Q I RP KSL VV+SWA ++  G +KFL W+ L SSWKGI  SA GLGI+T+ MQILIR SQSERSTPAKVVP+KPK++  PE ++Q
Sbjct:  274 FVAKDALLDKHIAADTFPGQQEQNIGRPIKSLAVVLSWACVLTLGAIKFLHWAQLFSSWKGITISALGLGIITLCMQILIRSSQSERSTPAKVVPAKPKDNHHPESSSQ 382          
BLAST of EY663946 vs. ExPASy Swiss-Prot
Match: LPAT2_BRANA (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica napus GN=LPAT2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.397e-32
Identity = 70/109 (64.22%), Postives = 83/109 (76.15%), Query Frame = 1
Query:  151 FCT*DALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAFGLGIVTVLMQILIRFSQSERSTPAKVVPSKPKNSKEPEQTTQ 477
            F   DALLDKH A DTF  Q+ Q I RP KSL VV+SWA L+  G +KFL WS+L SSWKGIA SAFGLGI+T+ MQILIR SQSERSTPAKV P+KPK++ +   ++Q
Sbjct:  274 FVAKDALLDKHIAADTFPGQKEQNIGRPIKSLAVVVSWACLLTLGAMKFLHWSNLFSSWKGIALSAFGLGIITLCMQILIRSSQSERSTPAKVAPAKPKDNHQSGPSSQ 382          
BLAST of EY663946 vs. ExPASy Swiss-Prot
Match: LPAT2_BRAOL (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica oleracea GN=LPAT2 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.930e-30
Identity = 68/109 (62.39%), Postives = 80/109 (73.39%), Query Frame = 1
Query:  151 FCT*DALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAFGLGIVTVLMQILIRFSQSERSTPAKVVPSKPKNSKEPEQTTQ 477
            F   DALLDKH A DTF  Q+ Q I RP KSL VV+SWA L+  G +KFL WS+L SS KGIA SA GLGI+T+ MQILIR SQSERSTPAKV P+KPK+  +   ++Q
Sbjct:  275 FVAKDALLDKHIAADTFPGQKEQNIDRPIKSLAVVVSWACLLTLGAMKFLHWSNLFSSLKGIALSALGLGIITLCMQILIRSSQSERSTPAKVAPAKPKDKHQSGSSSQ 383          
BLAST of EY663946 vs. ExPASy Swiss-Prot
Match: LPAT_MAIZE (1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 OS=Zea mays GN=PLS1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.247e-21
Identity = 48/99 (48.48%), Postives = 72/99 (72.73%), Query Frame = 1
Query:  151 FCT*DALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAFGLGIVTVLMQILIRFSQSERSTPAKVVPSKPK 447
            F   DALLDKH A  TF D+E++ I RP KSLLV + W+ L++FG ++F +W+ LLS+W+G+AF+A G+ +VT +M + I FSQ+ERS+ A+   ++ K
Sbjct:  275 FVAKDALLDKHLATGTF-DEEIRPIGRPVKSLLVTLFWSCLLLFGAIEFFKWTQLLSTWRGVAFTAAGMALVTGVMHVFIMFSQAERSSSARAARNRVK 372          
BLAST of EY663946 vs. ExPASy Swiss-Prot
Match: LPAT3_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=LPAT3 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.183e-19
Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 1
Query:  151 FCT*DALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAFGLGIVTVLMQILIRFSQSERSTPAK 426
            F T DA L+K+  +D FSD E+ +I RP K L+VVI W   ++FG  K LQW S+++SWK I    F L I T+ MQILI+ S+S+RSTPAK
Sbjct:  275 FITKDAQLEKYFTKDVFSDLEVHQINRPIKPLIVVIIWLGFLVFGGFKLLQWLSIVASWKIILLFVFFLVIATITMQILIQSSESQRSTPAK 366          
The following BLAST results are available for this feature:
BLAST of EY663946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
LPAT2_ARATH1.835e-3263.301-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LPAT2_BRANA2.397e-3264.221-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LPAT2_BRAOL2.930e-3062.391-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LPAT_MAIZE3.247e-2148.481-acyl-sn-glycerol-3-phosphate acyltransferase PLS... [more]
LPAT3_ARATH5.183e-1952.171-acyl-sn-glycerol-3-phosphate acyltransferase 3 O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-061-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663946 ID=EY663946; Name=EY663946; organism=Citrus sinensis; type=EST; length=624bp
CCACGCGTCCGTACGTTCGTGGCCAAGTTGAATACTCCTTGATGCTTGCT
TGTTCAGTTTATTCTACACAGCCTCTATACTCTTGCTTCGTGTGCCTAAA
TCTTATCATCTGCTTGGTTTGGTAAGCTTTATTTTCAGTCTCCCTGATTT
TTTTGCACGTAGGATGCACTTTTGGACAAACATAATGCAGAAGACACATT
TAGTGACCAAGAGTTGCAGGAAATTCCCCGGCCAAAAAAATCACTTCTGG
TCGTTATCTCCTGGGCATCTCTGGTAATATTTGGGGTTCTGAAGTTTCTT
CAGTGGTCTTCACTTTTATCCTCATGGAAGGGCATTGCATTTTCGGCATT
TGGCTTGGGTATTGTCACCGTTCTGATGCAGATCTTAATTCGCTTTTCCC
AGTCAGAGCGTTCTACCCCTGCCAAGGTCGTCCCATCAAAGCCCAAGAAC
AGCAAAGAGCCGGAGCAGACCACACAAGACAAACAACGGTTACGAGATCT
ACTTCGAGTAACTTAGTCGTGCATTTCTGTTTCAAATTCATGTCTAGCTA
TGGCTTTGATACCGGTGTGACGCAGTTTGTAAAGCACATCAATTCATTAT
TTGCTGGTTAAAAAAAAAAAAAAA
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