EY744481

Overview
NameEY744481
Unique NameEY744481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744481 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.190e-36
Identity = 76/177 (42.94%), Postives = 108/177 (61.02%), Query Frame = 3
Query:   15 EPETFEEA---SQSSEWMTAMKDEITALEQNQTWELVPKPKDVKPISCRWVYKIKHCPDGSIERYKARLVARGFSQQYGLDYDETFSPXXXXXXXXXXXXXXXNKSWNLWQMDVKNAFLHGELDREIYMIQPMGFQNRGHPEYVCKLREALYRLKQAPRAWYGKIAEFLTQSGYSLT 536
            EPE+ +E     + ++ M AM++E+ +L++N T++LV  PK  +P+ C+WV+K+K   D  + RYKARLV +GF Q+ G+D+DE FSP               +    + Q+DVK AFLHG+L+ EIYM QP GF+  G    VCKL ++LY LKQAPR WY K   F+    Y  T
Sbjct:  810 EPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKT 986          
BLAST of EY744481 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 4.617e-27
Identity = 66/179 (36.87%), Postives = 98/179 (54.75%), Query Frame = 3
Query:   18 PETFEEAS---QSSEWMTAMKDEITALEQNQTWELVPKPKDVKPISCRWVYKIKHCPDGSIERYKARLVARGFSQQYGLDYDETFSPXXXXXXXXXXXXXXXNKSWNLWQMDVKNAFLHGELDREIYMIQPMGFQNRGHPEYVCKLREALYRLKQAPRAWYGKIAEFLTQSGYSLTSCE 545
            P +F+E       S W  A+  E+ A + N TW +  +P++   +  RWV+ +K+   G+  RYKARLVARGF+Q+Y +DY+ETF+P                 +  + QMDVK AFL+G L  EIYM  P G     + + VCKL +A+Y LKQA R W+    + L +  +  +S +
Sbjct:  891 PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGIS--CNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVD 1067          
BLAST of EY744481 vs. ExPASy Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.339e-16
Identity = 38/85 (44.71%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   15 EPETFEEASQSSEWMTAMKDEITALEQNQTWELVPKPKDVKPISCRWVYKIKHCPDGSIERYKARLVARGFSQQYGLDYDETFSP 269
            EP++   A +   W  AM++E+ AL +N+TW LVP P +   + C+WV+K K   DG+++R KARLVA+GF Q+ G+ + ET+SP
Sbjct:   27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSP 111          

HSP 2 Score: 21.557 bits (44), Expect = 9.339e-16
Identity = 14/44 (31.82%), Postives = 19/44 (43.18%), Query Frame = 1
Query:  310 QPTKAGTCGRWT*RMPFSMESWIERST*FNRWVFRTEVILSMCV 441
            Q  + G    W  +M FSM  + ++    N  V R   I  MCV
Sbjct:  126 QQLEVGQSINWMFKMHFSMGIFKKKFICINLLVLRILFIHPMCV 169          
The following BLAST results are available for this feature:
BLAST of EY744481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
POLX_TOBAC3.190e-3642.94Retrovirus-related Pol polyprotein from transposon... [more]
COPIA_DROME4.617e-2736.87Copia protein OS=Drosophila melanogaster GN=GIP PE... [more]
M820_ARATH9.339e-1644.71Uncharacterized mitochondrial protein AtMg00820 OS... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-B01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744481 ID=EY744481; Name=EY744481; organism=Citrus sinensis; type=EST; length=938bp
AAGCAACTGGAATAGAACCTGAGACGTTCGAAGAAGCGTCACAGAGTTCT
GAGTGGATGACAGCTATGAAAGACGAGATCACTGCACTTGAGCAAAATCA
GACCTGGGAACTCGTGCCAAAGCCAAAAGATGTGAAACCCATATCCTGCA
GATGGGTTTACAAAATAAAGCACTGTCCAGATGGGTCAATCGAGAGGTAC
AAGGCTCGATTGGTAGCTCGTGGTTTCTCTCAACAATATGGACTAGATTA
TGACGAAACGTTTAGTCCAGTGGCAAAACTTACAACCGTCCGAGTCTTAC
TTGCACTTGCAGCCAACAAAAGCTGGAACTTGTGGCAGATGGACGTGAAG
AATGCCTTTCTCCATGGAGAGCTGGATAGAGAGATCTACATGATTCAACC
GATGGGTTTTCAGAACCGAGGTCATCCTGAGTATGTGTGTAAACTGCGAG
AGGCTCTCTACCGACTAAAACAAGCACCCAGGGCGTGGTATGGCAAGATT
GCTGAATTTCTAACTCAAAGTGGGTATTCATTAACATCTTGCGAACTCCA
ACTTTGTTGCTAAAGCTAAATGGAAAAAAGGATACCTATTGTGCTCCGCG
GTACTTAAATTGATCTAAATCATCACTGGACATGACTGTTGAAAAAATTT
TTCCGAAACAAGGACAATTTTGACCCTATCTTTTCAAATCCAAAAACTTT
ACACCACTTTAAGCCTTTTCTTGAGCATACAGCTCCATCCAAAGCAACAA
AAGCGCAATTTCTCTTTGCCCACCGACAATTCCCCCGACCATTCTCGAAA
GCCATCGCGCCTACGCGCGACTTTGTCCGCCCTGCCTACCACCGGCAACG
GGACAAAAATCGACAACCACACCAAAGACGACCACTGGTGAGACAAACTA
TATCAATGACGGCCATAGAACCAATGGCAAGAGAGGAG
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