EY663530

Overview
NameEY663530
Unique NameEY663530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length550
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663530 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.789e-18
Identity = 50/81 (61.73%), Postives = 55/81 (67.90%), Query Frame = 2
Query:   29 FFHNPRVRSVGHNTLERVAPLTHAVGNVLFPLFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 271
            F+H      V  NTLERVAPLTHAVGNVL  +FVIGFSI+ FGNKISTQ              YS+IKAQ+EEEKRQ KAA
Sbjct:  324 FYH--LYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIKAQIEEEKRQAKAA 402          
BLAST of EY663530 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.279e-17
Identity = 50/81 (61.73%), Postives = 55/81 (67.90%), Query Frame = 2
Query:   29 FFHNPRVRSVGHNTLERVAPLTHAVGNVLFPLFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 271
            F+H      V  NTLERVAPLTHAVGNVL  +FVIGFSI+ FGNKISTQ              YS+IKA+MEEEKRQ KAA
Sbjct:  336 FYH--LYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSFIKAKMEEEKRQKKAA 414          
BLAST of EY663530 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.181e-17
Identity = 47/68 (69.12%), Postives = 51/68 (75.00%), Query Frame = 2
Query:   65 NTLERVAPLTHAVGNVLFPLFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKA 268
            NTLERVAPLTHAVGNVL  +FVIGFSI+AFGNKISTQ              YS IKA+MEEEKRQMK+
Sbjct:  336 NTLERVAPLTHAVGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYSLIKAKMEEEKRQMKS 403          
BLAST of EY663530 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.082e-16
Identity = 47/81 (58.02%), Postives = 55/81 (67.90%), Query Frame = 2
Query:   29 FFHNPRVRSVGHNTLERVAPLTHAVGNVLFPLFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 271
            F+H      +  NTLERVAPLTHAVGNVL  +FVIGFSI+ FGNKISTQ              YS IKA++EEEKR+MK+A
Sbjct:  329 FYH--LYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYSLIKARIEEEKRRMKSA 407          
BLAST of EY663530 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.149e-16
Identity = 46/80 (57.50%), Postives = 53/80 (66.25%), Query Frame = 2
Query:   29 FFHNPRVRSVGHNTLERVAPLTHAVGNVLFPLFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKA 268
            F+H      +  NTLERVAPLTHAVGNVL  +FVIGFSI+ FGNKISTQ              YSYIKA++EEEKR+  A
Sbjct:  332 FYH--LYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSYIKAKIEEEKRKKSA 409          
BLAST of EY663530 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.162e-16
Identity = 44/69 (63.77%), Postives = 50/69 (72.46%), Query Frame = 2
Query:   65 NTLERVAPLTHAVGNVLFPLFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 271
            NTLERVAPLTHAVGNVL  +FVIGFSI+ FGNKISTQ              YS IKA++EEEKR +K+A
Sbjct:  340 NTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYSLIKAKIEEEKRGLKSA 408          
BLAST of EY663530 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.197e-15
Identity = 45/69 (65.22%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   65 NTLERVAPLTHAVGNVLFPLFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 271
            NTLERVAPLTHAVGNVL  +FVIGFSI+ FGNKISTQ              YS IKA++EEEKRQ K A
Sbjct:  339 NTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYSVIKAKIEEEKRQGKTA 407          
The following BLAST results are available for this feature:
BLAST of EY663530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TPT_PEA9.789e-1861.73Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU1.279e-1761.73Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL2.181e-1769.12Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR1.082e-1658.02Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE3.149e-1657.50Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR9.162e-1663.77Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB1.197e-1565.22Triose phosphate/phosphate translocator, chloropla... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-056-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663530 ID=EY663530; Name=EY663530; organism=Citrus sinensis; type=EST; length=550bp
ACTGGTCGCCTGCTGTACCGGTCCGGAATTCTTTCACAACCCACGCGTCC
GATCAGTTGGTCACAACACCTTGGAGAGGGTTGCACCTCTTACTCATGCA
GTTGGCAATGTACTGTTTCCTCTGTTTGTGATTGGGTTCTCAATCCTGGC
CTTTGGCAACAAGATCTCAACCCAAACTGGTATTGGAACAGTCATTGCAA
TTGCTGGAGTGGCAGCCTACTCTTACATCAAGGCCCAAATGGAAGAAGAG
AAACGACAAATGAAAGCAGCATGAGAAGAAAAGAAGCATGTGAATGAGGA
AAGGTCCCGATGTAAAGTCGTGCTACTTTTTCCCCCAAAGATCAAAATGA
CAAATTGAGTGTATTTCTTTGGCTGTGAGGTTATTTTTTGACAATAAATT
TTCTTTAATTCAGAGTACAAACAATTTGCTAATTTGCAATCAGCTCATGT
TGACTGATAATAATGTATCGCTTGCTTCCGTCTCTCAAAACAAGCTTATA
TATAATTCAATTAGCAGCTCTGAAGAGTTTTACAGAAAAAAAAAAAAAAA
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