EY663529

Overview
NameEY663529
Unique NameEY663529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7849 contig Csv1_Contig7849:1..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY663529 vs. ExPASy Swiss-Prot
Match: FCL2_ARATH (Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 2.383e-84
Identity = 134/170 (78.82%), Postives = 152/170 (89.41%), Query Frame = 3
Query:   81 KYLGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLENVKQ 590
            K  GIKMCQAY++Q++++AISGMPTNLYG NDNFHPENSHVLPALMRRFHEAK N A EVVVWG+GSPLREFLHVDDLADA VF+MD+Y G EH+NVGSG EV+IKELAE VKE VGF+G+LVWD++KPDGTPRKLMDSSKLA LGW  KI L+DGL+ TY+WYLENV Q
Sbjct:  156 KIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLGWTPKISLKDGLSQTYEWYLENVVQ 325          

HSP 2 Score: 47.7506 bits (112), Expect = 2.383e-84
Identity = 21/30 (70.00%), Postives = 24/30 (80.00%), Query Frame = 2
Query:    2 FVNPRVRENVLLTGPLEPTNEWYAIAKISG 91
            F    + E+ LLTGPLEPTNEWYAIAKI+G
Sbjct:  130 FAPQPIPESALLTGPLEPTNEWYAIAKIAG 159          
BLAST of EY663529 vs. ExPASy Swiss-Prot
Match: FCL1_ORYSJ (Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica GN=Os06g0652400 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 6.900e-84
Identity = 131/168 (77.98%), Postives = 150/168 (89.29%), Query Frame = 3
Query:   81 KYLGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLENV 584
            K  GIKMCQAY+IQ+ F+AIS MPTNLYGP DNFHPENSHVLPAL+RRFHEAK + A EVVVWGTGSPLREFLHVDDLADAV+F+MD Y GLEH+NVGSG EV+IKELAE VKE VGF+G+LVWDSSKPDGTPRKLMDSSK+  +GW+ K+ L++GL +TYKWY+ENV
Sbjct:  156 KIAGIKMCQAYRIQHGFDAISAMPTNLYGPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLMDHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQEMGWKPKVPLKEGLVETYKWYVENV 323          

HSP 2 Score: 46.9802 bits (110), Expect = 6.900e-84
Identity = 20/30 (66.67%), Postives = 24/30 (80.00%), Query Frame = 2
Query:    2 FVNPRVRENVLLTGPLEPTNEWYAIAKISG 91
            F    + EN LL+GPLEPTNEWYA+AKI+G
Sbjct:  130 FAPQPIPENSLLSGPLEPTNEWYAVAKIAG 159          
BLAST of EY663529 vs. ExPASy Swiss-Prot
Match: FCL1_ARATH (GDP-L-fucose synthase 1 OS=Arabidopsis thaliana GN=GER1 PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 4.435e-83
Identity = 134/168 (79.76%), Postives = 151/168 (89.88%), Query Frame = 3
Query:   81 KYLGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLENV 584
            K  GIK CQAY+IQ+ ++AISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGA+EVVVWGTGSPLREFLHVDDLADA VF++D Y GLEH+N+GSG+EV+I+ELAE VKE VGFEG+L WD +KPDGTPRKLMDSSKLA LGW  K+ LRDGL+ TY WYL+NV
Sbjct:  142 KIAGIKTCQAYRIQHGWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRYSGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLASLGWTPKVSLRDGLSQTYDWYLKNV 309          

HSP 2 Score: 42.3578 bits (98), Expect = 4.435e-83
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 2
Query:    2 FVNPRVRENVLLTGPLEPTNEWYAIAKISG 91
            F    + E+ LLT  LEPTNEWYAIAKI+G
Sbjct:  116 FAPQPIPESALLTASLEPTNEWYAIAKIAG 145          
BLAST of EY663529 vs. ExPASy Swiss-Prot
Match: FCL2_ORYSJ (Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica GN=Os06g0652300 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.631e-57
Identity = 92/168 (54.76%), Postives = 129/168 (76.79%), Query Frame = 3
Query:   78 PKYLGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 581
            PK  GIKMCQA + +Y  +AI+  P NLYGP   F PE+SHV+PAL+RRFH AK+ GA EV VWG+G+  REF HVDDLA+AVV +M+ Y G EH+NVGSG+EV+++ELAE V+  VG+EG + WD+++P+G  R+++DS ++ +LGW  ++ LRDG+ D Y++YL +
Sbjct:  171 PKIAGIKMCQAVRAEYGLDAIAAAPNNLYGPRHPFPPEHSHVIPALIRRFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVVVLMERYSGEEHVNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMRKLGWEPRVALRDGIQDLYRFYLRH 338          

HSP 2 Score: 32.3426 bits (72), Expect = 6.631e-57
Identity = 14/23 (60.87%), Postives = 17/23 (73.91%), Query Frame = 2
Query:   23 ENVLLTGPLEPTNEWYAIAKISG 91
            E+ LLTGP    +EWYAI KI+G
Sbjct:  153 ESALLTGPPAEGSEWYAIPKIAG 175          
BLAST of EY663529 vs. ExPASy Swiss-Prot
Match: Y4AF_RHISN (Uncharacterized protein y4aF OS=Rhizobium sp. (strain NGR234) GN=NGR_a00420 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.918e-56
Identity = 89/168 (52.98%), Postives = 122/168 (72.62%), Query Frame = 3
Query:   81 KYLGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLENV 584
            K  GIK+CQAY+ QY  N IS MPTNLYGP D F   +SHV+PAL+R+ HEAK+     + +WG+G+P R+FL+ +D +DA+VF++  Y   EH+N+GSG E+SI ELA  V   VGF+G++V+D+SKPDGTPRKL+ S +L  +GWR K  L  GLA +Y+ ++ NV
Sbjct:  144 KIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHVVPALIRKAHEAKIKDLGCLSIWGSGTPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGGEISIIELAHIVCRVVGFKGDIVFDTSKPDGTPRKLLSSERLVSMGWRPKTSLELGLAKSYESFVSNV 311          

HSP 2 Score: 49.6766 bits (117), Expect = 1.918e-56
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 2
Query:   17 VRENVLLTGPLEPTNEWYAIAKISG 91
            +RE  LLTGPLEPTNEWYAIAKI+G
Sbjct:  123 IREEALLTGPLEPTNEWYAIAKIAG 147          
BLAST of EY663529 vs. ExPASy Swiss-Prot
Match: FCL_ECOLI (GDP-L-fucose synthetase OS=Escherichia coli (strain K12) GN=fcl PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 4.742e-52
Identity = 100/194 (51.55%), Postives = 136/194 (70.10%), Query Frame = 3
Query:   51 SRRMNGTL*P--------KYLGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMD---------EYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 581
            S  + GTL P        K  GIK+C++Y  QY  +  S MPTNLYGP+DNFHP NSHV+PAL+RRFHEA    A +VVVWG+G+P+REFLHVDD+A A + +M+             L H+NVG+G + +I+ELA+ + + VG++G +V+D+SKPDGTPRKL+D ++L +LGW  +I L  GLA TY+W+LEN
Sbjct:  122 SELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN 315          
BLAST of EY663529 vs. ExPASy Swiss-Prot
Match: NOLK_AZOC5 (Nodulation protein nolK OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=nolK PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.895e-27
Identity = 62/180 (34.44%), Postives = 100/180 (55.56%), Query Frame = 3
Query:   39 RAPWSRRMNGTL*PKYLGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGL-EHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYL 575
            R P+     G    K +G+K+C+       FN  + +  NLYG  DNF P  SH+LPA++ + H+A   G++ V +WG G+  REF+   D A  ++  ++  + +   +NVG GK++S+ E    V   +G+ GE V+D ++P G   KLMD + L  LGW  +  L  G+  TY++Y+
Sbjct:  126 RGPFEVTNEGYALAKTVGLKICEYIDKLPNFNYKTLIACNLYGVGDNFDPRRSHLLPAIIEKIHKASQCGSESVSIWGDGTARREFMFAYDFAKIIIKALEVPELIPSSMNVGVGKDLSVLEYYSLVARVIGWSGEFVYDLNRPVGMRSKLMDITHLTALGWVPERSLEGGIRSTYQYYI 305          
BLAST of EY663529 vs. ExPASy Swiss-Prot
Match: FCL_PONAB (GDP-L-fucose synthetase OS=Pongo abelii GN=TSTA3 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.300e-25
Identity = 66/165 (40.00%), Postives = 102/165 (61.82%), Query Frame = 3
Query:  105 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKL-ARLGWRAKIELRDGLADTYKWYLENVKQ 590
            +AY  QY     + +PTN++GP+DNF+ E+ HVLP L+ + H AK +G+  + VWGTG P R+F++  DLA   ++++ EY+ +E   L+VG   EVSIKE AE V EA+ F GE+ +D++K DG  +K   +SKL   L        +  + +T  W+ +N +Q
Sbjct:  155 RAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGS-ALTVWGTGKPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEDDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNYEQ 318          
BLAST of EY663529 vs. ExPASy Swiss-Prot
Match: FCL_HUMAN (GDP-L-fucose synthetase OS=Homo sapiens GN=TSTA3 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.300e-25
Identity = 66/165 (40.00%), Postives = 103/165 (62.42%), Query Frame = 3
Query:  105 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKL-ARLGWRAKIELRDGLADTYKWYLENVKQ 590
            +AY  QY     + +PTN++GP+DNF+ E+ HVLP L+ + H AK +G+  + VWGTG+P R+F++  DLA   ++++ EY+ +E   L+VG   EVSIKE AE V EA+ F GE+ +D++K DG  +K   +SKL   L        +  + +T  W+ +N +Q
Sbjct:  155 RAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGS-ALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNYEQ 318          
BLAST of EY663529 vs. ExPASy Swiss-Prot
Match: FCL_CRIGR (GDP-L-fucose synthetase OS=Cricetulus griseus GN=TSTA3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.897e-25
Identity = 67/165 (40.61%), Postives = 102/165 (61.82%), Query Frame = 3
Query:  105 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKL-ARLGWRAKIELRDGLADTYKWYLENVKQ 590
            +AY  Q+     + +PTN++GP+DNF+ E+ HVLP L+ + H AK NG+  + VWGTG P R+F++  DLA   ++++ EY+ +E   L+VG   EVSIKE AE V EA+ F GE+ +DS+K DG  +K   + KL A L        +  + +T  W+ +N +Q
Sbjct:  155 RAYFQQHGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSNGS-ALTVWGTGKPRRQFIYSLDLARLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFCGEVTFDSTKSDGQYKKTASNGKLRAYLPDFRFTPFKQAVKETCAWFTDNYEQ 318          
The following BLAST results are available for this feature:
BLAST of EY663529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
FCL2_ARATH2.383e-8478.82Putative GDP-L-fucose synthase 2 OS=Arabidopsis th... [more]
FCL1_ORYSJ6.900e-8477.98Probable GDP-L-fucose synthase 1 OS=Oryza sativa s... [more]
FCL1_ARATH4.435e-8379.76GDP-L-fucose synthase 1 OS=Arabidopsis thaliana GN... [more]
FCL2_ORYSJ6.631e-5754.76Putative GDP-L-fucose synthase 2 OS=Oryza sativa s... [more]
Y4AF_RHISN1.918e-5652.98Uncharacterized protein y4aF OS=Rhizobium sp. (str... [more]
FCL_ECOLI4.742e-5251.55GDP-L-fucose synthetase OS=Escherichia coli (strai... [more]
NOLK_AZOC56.895e-2734.44Nodulation protein nolK OS=Azorhizobium caulinodan... [more]
FCL_PONAB1.300e-2540.00GDP-L-fucose synthetase OS=Pongo abelii GN=TSTA3 P... [more]
FCL_HUMAN1.300e-2540.00GDP-L-fucose synthetase OS=Homo sapiens GN=TSTA3 P... [more]
FCL_CRIGR2.897e-2540.61GDP-L-fucose synthetase OS=Cricetulus griseus GN=T... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-056-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663529 ID=EY663529; Name=EY663529; organism=Citrus sinensis; type=EST; length=862bp
TTTCGTCAACCCACGCGTCCGCGAAAACGTTCTCTTGACGGGCCCCTTGG
AGCCGACGAATGAATGGTACGCTATAGCCAAAATATCTGGGCATTAAGAT
GTGCCAGGCTTATCAGATTCAGTATAAATTCAATGCAATTTCTGGGATGC
CCACGAATTTATATGGCCCCAATGATAATTTCCACCCCGAAAACTCCCAC
GTGTTACCCGCTTTGATGAGGAGATTCCACGAAGCTAAGGTGAATGGAGC
TAAGGAAGTGGTGGTGTGGGGCACTGGGAGTCCGTTAAGGGAGTTCTTAC
ACGTTGATGATTTGGCTGATGCAGTGGTTTTCATGATGGACGAGTATGAT
GGACTTGAACATTTGAATGTGGGGAGTGGGAAGGAAGTGAGCATTAAAGA
GTTGGCGGAGTGGGTGAAGGAAGCAGTGGGATTTGAAGGAGAGCTTGTTT
GGGATTCATCCAAGCCAGATGGAACGCCGAGAAAGCTGATGGATAGTTCT
AAGCTTGCCAGGTTGGGGTGGAGGGCAAAGATTGAGCTTAGAGATGGTCT
TGCTGATACTTATAAGTGGTACTTGGAGAATGTTAAGCAATGATGGTAAT
TAAGCTGGTTCATTTTTGTGTTGTTTTATTAGAATTATTGGTCTCATTTG
AATAATATGAATTGATTGCGTGCTATTATGATTAAGGTTGTTATGATTAA
TGAGAGAGATGTTGTAGAACTATTTGGAGCAAACTTTCTNGTGTAATTGA
TAAATTATCAATTTTTATGGTTATTAATTGGGTCTGCAGATACTTATTTT
GTTATCTGCAGACCATGTTATGAATGACCATATATTTTTATGGTGCCAAA
AAAAAAAAAAAA
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