EY663527

Overview
NameEY663527
Unique NameEY663527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7847 contig Csv1_Contig7847:1..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY663527 vs. ExPASy Swiss-Prot
Match: BH035_ARATH (Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 6.191e-58
Identity = 125/218 (57.34%), Postives = 157/218 (72.02%), Query Frame = 2
Query:   20 RTWLSDEAFSGYYDSSSPDGAVSSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIIELES-GKSKKNFGFDFEQELPVLLRPKK-KKIDQFFDSAGSRTAPVEILELRVKSMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFXXXXXXXXXXXXXXXQTAIQALNDPSSP 667
            R+W  +EA SG YDSSSPDGA SS ASKNIVSERNRR+KLN+RLFALRSVVPNI+KMDKASIIKDAI YI+ L  +EK++  EI ELES  KS  +F  DF+++L V +  KK K++D     +GS T+ +E+LEL+V  MGE+ +VVSVTC+KRTDTMVKLCE FESL LKI+T+N+T+ +G +  T F               +T I A N+  SP
Sbjct:   28 RSWPLEEAISGSYDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLD-----SGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETGIGAYNETQSP 240          
BLAST of EY663527 vs. ExPASy Swiss-Prot
Match: BH027_ARATH (Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.025e-44
Identity = 102/197 (51.78%), Postives = 133/197 (67.51%), Query Frame = 2
Query:   23 TWLSDEAFSGYYDSSSPDGAVSS-AASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIIELESGKS---------KKNFGFDFEQELPVLLRPKKKKIDQFFDSAGSRTAPVEILELRVKSMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAF 583
            +W  +EAFSG  +SSSPDGA +S A+SKN+VSERNRR+KLN+RLFALRSVVPNISK+DKAS+IKD+IDY+QEL +QEK +  EI ELES  +           NF     Q+       + KK  Q   S   +  P+E+LE++V  MGEK +VV +TCSK+ +TMV+LC+  ESL L I+T N ++   RL  T F
Sbjct:   27 SWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLF 223          
BLAST of EY663527 vs. ExPASy Swiss-Prot
Match: AMS_ARATH (Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.822e-17
Identity = 55/161 (34.16%), Postives = 87/161 (54.04%), Query Frame = 2
Query:   98 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEI---IELESGKSKKNFGFDFEQELPVLLRP------KKKKIDQFFDSAGSRTAPVEI-LELRVKSMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANIT 550
            +KN+++ER RRKKLN+RL+ALRS+VP I+K+D+ASI+ DAI+Y++EL  + K ++DE+    E E G ++   G      +     P          + Q  D   S     E+  ++ V  +  +   V V C  +     +L EA +SL L++  AN T
Sbjct:  313 AKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTT 473          
BLAST of EY663527 vs. ExPASy Swiss-Prot
Match: FIT_ARATH (Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.463e-14
Identity = 49/141 (34.75%), Postives = 80/141 (56.74%), Query Frame = 2
Query:   98 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIIELESGKSKKNFGFDFEQELPVLLRPKKKKIDQFFDSAGSRTAPVEILELRVKSMGEKILVVSVTCSKRTDTMVKLCEAFESL 520
            S+ ++SER RR ++ ++L+ALRS+VPNI+KMDKASI+ DA+ Y+QEL  Q K+++ +I  LE+  +    G+           P  +K   F     +  A  +I+++ V  + EK   V + C+K       L ++ ESL
Sbjct:  130 SRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEASLNSTG-GYQEH-------APDAQKTQPF--RGINPPASKKIIQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESL 260          
BLAST of EY663527 vs. ExPASy Swiss-Prot
Match: BH090_ARATH (Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.217e-14
Identity = 44/151 (29.14%), Postives = 84/151 (55.63%), Query Frame = 2
Query:   98 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIIELESGKSKKNFGFDFEQELPVLLRPKKKKIDQFFDSAGSRTAPVEILELRVKSMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANIT 550
            SKN+ SER RR+++N+ ++ LR+VVP I+K++K  I  DA+DYI EL  +++++ DE+  +   + K+       +E   +  P+ +++     S  ++      +++ V   GE+  ++ V    + D   +L EA +  +L+II  N T
Sbjct:  263 SKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGINEMECKEIAA----EEQSAIADPEAERV----SSKSNKRVKKNEVKIEVHETGERDFLIRVVQEHKQDGFKRLIEAVDLCELEIIDVNFT 405          
BLAST of EY663527 vs. ExPASy Swiss-Prot
Match: SCRM2_ARATH (Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.166e-14
Identity = 53/169 (31.36%), Postives = 88/169 (52.07%), Query Frame = 2
Query:   56 YDSSSPDGAVSSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIIELESGKSKKNFGFDFEQELPVLLRPKKKKIDQFFDSAGSRTAPVEILELRVKSMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAG 562
            +++++  G      +KN+++ER RRKKLN+RL+ LRSVVP ISKMD+ASI+ DAIDY++EL +   RI D   ELES     +         P       +  ++   S+   +   +   + V+    K + + + C +R   ++    A ++L L +  A I+   G
Sbjct:  252 HNTNNNKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ---RINDLHTELESTPPSSS---SLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNG 414          
BLAST of EY663527 vs. ExPASy Swiss-Prot
Match: ATR2_ARATH (Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.166e-14
Identity = 56/163 (34.36%), Postives = 92/163 (56.44%), Query Frame = 2
Query:  104 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELH---EQEKRIRDEIIELESGKSKK-NFGFDFEQELPVLLRPKKKKIDQFFDSAGSRTAPVEILELRVKSMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTA 580
            ++ +ER RR+KLN+R ++LR+VVPN+SKMDKAS++ DAI YI EL    +Q +  ++EI +   G SK+ N G           R K++K      S    TA    +E+ VK +G  ++ + V C K+     +  EA + L L++  A+++ V   +++ A
Sbjct:  416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGS------RAKERK-----SSNQDSTASSIEMEIDVKIIGWDVM-IRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQA 566          
BLAST of EY663527 vs. ExPASy Swiss-Prot
Match: BH013_ARATH (Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 51/162 (31.48%), Postives = 83/162 (51.23%), Query Frame = 2
Query:   95 ASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIIELESGKSKKNFGFDFEQELPVLLRPKKKKIDQFFDSAGSRTAPVEI-LELRVKSMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKT 577
            A  ++ +ER RR+KLN+R +ALRSVVPNISKMDKAS++ DA+ YI ELH + K     ++E E    ++  G+                         S   P+ +  ++ V++ GE +  V + C   +    ++  AFE  K+++I +N+      +L T
Sbjct:  431 ALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLK-----VMEAE----RERLGY-------------------------SSNPPISLDSDINVQTSGEDV-TVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHT 557          
BLAST of EY663527 vs. ExPASy Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.085e-13
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 2
Query:  104 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIIELESGKSKKN 304
            ++ +ER RR+KLN+R +ALRSVVPNISKMDKAS++ DAI YI+EL E+ K + DE +  +   S+ N
Sbjct:  396 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSLSESN 462          
BLAST of EY663527 vs. ExPASy Swiss-Prot
Match: ICE1_ARATH (Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.723e-13
Identity = 52/165 (31.52%), Postives = 86/165 (52.12%), Query Frame = 2
Query:   77 GAVSSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIIELESGK---SKKNFGFDFEQELPVLLRPKKKKIDQFFDSAGSRTAPVEILELRVKSMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAG 562
            G      +KN+++ER RRKKLN+RL+ LRSVVP ISKMD+ASI+ DAIDY++EL ++   + +E+     G    +  +F         +  R K++       S   + A VE     V+    + + + + C +R   ++   +A ++L L +  A I+   G
Sbjct:  299 GKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVE-----VRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG 458          
The following BLAST results are available for this feature:
BLAST of EY663527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
BH035_ARATH6.191e-5857.34Transcription factor bHLH35 OS=Arabidopsis thalian... [more]
BH027_ARATH1.025e-4451.78Transcription factor bHLH27 OS=Arabidopsis thalian... [more]
AMS_ARATH1.822e-1734.16Transcription factor ABORTED MICROSPORES OS=Arabid... [more]
FIT_ARATH2.463e-1434.75Transcription factor FER-LIKE IRON DEFICIENCY-INDU... [more]
BH090_ARATH3.217e-1429.14Transcription factor bHLH90 OS=Arabidopsis thalian... [more]
SCRM2_ARATH7.166e-1431.36Transcription factor SCREAM2 OS=Arabidopsis thalia... [more]
ATR2_ARATH7.166e-1434.36Transcription factor ATR2 OS=Arabidopsis thaliana ... [more]
BH013_ARATH1.596e-1331.48Transcription factor bHLH13 OS=Arabidopsis thalian... [more]
AIB_ARATH2.085e-1355.22Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Ar... [more]
ICE1_ARATH2.723e-1331.52Transcription factor ICE1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-056-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663527 ID=EY663527; Name=EY663527; organism=Citrus sinensis; type=EST; length=896bp
TTTCGAACAACCCCGCGTCCGCACATGGCTTTCGGACGAGGCGTTTTCGG
GGTACTATGACTCGAGTTCTCCGGACGGGGCGGTGTCGTCCGCGGCGTCC
AAGAATATTGTCTCGGAGAGGAATAGGAGAAAGAAGCTCAACGAAAGGCT
GTTTGCTCTTAGATCAGTTGTCCCCAATATTAGCAAGATGGATAAAGCAT
CAATAATCAAAGATGCTATCGATTACATACAAGAGCTGCACGAGCAAGAG
AAGAGGATTCGAGATGAAATAATCGAACTCGAGTCTGGGAAATCGAAGAA
GAATTTTGGGTTTGATTTCGAGCAGGAGCTGCCTGTTTTGTTGAGACCAA
AGAAGAAGAAAATTGACCAGTTCTTTGATTCGGCAGGATCAAGAACTGCT
CCTGTTGAAATCCTTGAACTTCGGGTAAAATCAATGGGAGAAAAGATATT
GGTGGTGAGCGTAACTTGTAGCAAAAGAACAGATACAATGGTTAAATTGT
GTGAGGCCTTTGAATCTTTAAAGCTAAAAATCATCACCGCAAATATCACC
GCTGTTGCTGGCAGGCTTTTGAAGACAGCCTTTATTGAGGCTGATGAAGA
GGAGATAGACGATTTGAAGATTAAAATTCAAACAGCAATTCAAGCTCTCA
ATGATCCATCAAGTCCCATGAGCATCTAATGTCACAAGCTCCAACAACTT
CAAATCGTGTGATGGTGTGAGTGAGTTTTTGGATGGGGATGTTTGATATG
CTTTTATCACCACTCACTCACCATAGCCTGCTTATTTTTCTTAGTCTTAC
CTTTTTTTTTTATGCTTGGGGTTTCTCATTTTATTGCTTAATGAAGAGTA
CGACGGTTCTGCCCCCCACCCCCTCTTGTTTCCTTTCATCCCCCCG
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