EY663525

Overview
NameEY663525
Unique NameEY663525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY663525 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 78/270 (28.89%), Postives = 116/270 (42.96%), Query Frame = 2 
Query:   35 MIFLLLLSVFLRGASSSILSEDTPISFSFPSFAKDSCDNKTLICYG--AIESSG-ALSITPGPPPNLPIR-KVGRVLYGKPLSLQRSFID------TTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPGDKFPPL----AVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDV--DLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVK--VVEKPINLSDIIPTPVYVGFTAATGDFLEKHEVINWTLHS 790
            + F+ L  + L   +SS       +SF+F +F  D  D   LI  G   I S G +L +T       P+R  VGR LY  PL L  S  +      TT T  +S   + T+  GDG+ F  A  +        G  LGL S        L    AVE DT +N N                + N + S   V    ++G     +I YN D  +LSV ++Y      +   V   ++L   +P  V VGF+ +TG +++ H +++WT +S
Sbjct:   20 LAFITLFLMLLNRVNSS-----DSLSFTFDNFRPDQRD---LILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLS---SPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNN------WDPSHRHIGIDVNTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNS 272
The following BLAST results are available for this feature:
BLAST of EY663525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEC2_CLALU6.634e-1228.89Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-056-B06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663525 ID=EY663525; Name=EY663525; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGTAAGTAGCTTTCCCAGAACAAAAATGATTTTCCTACTAC
TCCTCTCCGTTTTTCTTCGCGGAGCTTCTTCATCAATCCTTTCCGAAGAC
ACACCTATTAGCTTCTCATTTCCCTCATTCGCCAAAGACAGTTGTGACAA
TAAGACCCTCATTTGCTACGGAGCGATTGAAAGTTCCGGCGCCTTAAGCA
TCACACCAGGCCCTCCACCAAACCTGCCGATCAGAAAGGTTGGACGGGTT
TTATACGGCAAGCCTCTGAGTTTACAGCGATCTTTTATTGATACCACCAT
CACCATTAAGATCTCACGCCATCAGAATTACACTGATCGTGCCGGAGATG
GCATGACGTTCATTTTTGCAAGCGATAAAAACGGTCCATCAGCAAAGGGC
GTCGGCGAATATCTTGGACTGCAGTCTTCACCAGGCGATAAATTTCCTCC
ATTAGCCGTGGAGCTGGACACATGCCTGAACAAGAACCTGAATGATCCAG
ATGATAACCATATTGGCATCGACATAAACGGAATCGAATCAAATCCAGTT
AATAGTCTGCTTGACGTTGATCTCAAAAGTGGACGAGCAATCCAGGTTCG
AATTTATTACAATCCAGACTTTGGACAACTCTCTGTTTATGCGGCATATT
CGGGGGAAACACTTGTGAAGGTGGTTGAAAAACCCATTAACCTGTCAGAT
ATAATTCCAACGCCCGTCTATGTTGGATTCACAGCAGCTACGGGGGACTT
TTTAGAAAAGCATGAGGTTATAAATTGGACCCTTCACTCGNTCCCAGTGC
CGNCTTCTCTCANGGAGAAAACCTGGTGATGCCATATNATTCTAAACCGT
CTTGAAAAACATGTCACATAATTATAATNCATATAATCAT
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