EY744395

Overview
NameEY744395
Unique NameEY744395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length955
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744395 vs. ExPASy Swiss-Prot
Match: ATP4_ARATH (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.238e-67
Identity = 130/178 (73.03%), Postives = 150/178 (84.27%), Query Frame = 1
Query:  124 EVPATPAVDSTFVESWKKVNPIMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPLDQIDPSLVQKGLAEFNQKLISATTDPGES*SSDRG*MVQGELNSASNG 657
            E+P+T  +DSTFVE+WKKV P M+PP+TPS +M PRP TP+SIP+KLTVNFVLPY SEL+ KEVDMVI+PASTGQMGVLPGHVPTIAELKPG++SVH+G D KKYF+SSGFAF+HANSVADIIAVEAVPLD IDPS VQKGLAEF QKL SATTD  E   +  G  V   +N+A +G
Sbjct:   29 ELPST--LDSTFVEAWKKVAPNMDPPQTPSAFMKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASATTDL-EKAEAQIGVEVHSAINAALSG 203          
BLAST of EY744395 vs. ExPASy Swiss-Prot
Match: ATP4_IPOBA (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 3.049e-66
Identity = 128/178 (71.91%), Postives = 147/178 (82.58%), Query Frame = 1
Query:  124 EVPATPAVDSTFVESWKKVNPIMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPLDQIDPSLVQKGLAEFNQKLISATTDPGES*SSDRG*MVQGELNSASNG 657
            ++PA  A DSTFVE+WKK+ P ++PPKTPS YM PRP TP+SIPSKLTVNFVLPY+SEL+ KEVDMVI+PA+TGQMGVLPGHV TIAELKPGV+SVH+GND  KYFVS GFAFIHANS ADIIAVEAVPLD+ID +LVQKGLAEF QKL +A+TD  E   +  G  V   LN+A  G
Sbjct:   24 DLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRPATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDV-EKAEAQIGVDVHSALNAALTG 200          
BLAST of EY744395 vs. ExPASy Swiss-Prot
Match: ATP4_PEA (ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 7.274e-60
Identity = 118/175 (67.43%), Postives = 142/175 (81.14%), Query Frame = 1
Query:  133 ATPAVDSTFVESWKKVNPIMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPLDQIDPSLVQKGLAEFNQKLISATTDPGES*SSDRG*MVQGELNSASNG 657
            ATPA +S+FVE+W+KV+P ++PPKTP  ++  RP  P++IP+KLTVNFVLPY+S+L+AKEVD VI+PA+TG+MGVLPGHV TIAELKPGVL+V +G DT KYFVSSGF FIHANSVADIIAVEAVP++Q+D  LVQKGL EF QKL SATTD  E   +  G  V   LNSA  G
Sbjct:   24 ATPATNSSFVEAWRKVSPNIDPPKTPLEFLKTRPPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDL-EKREAQIGIDVDSALNSALTG 197          
BLAST of EY744395 vs. ExPASy Swiss-Prot
Match: ATPD_KLULA (ATP synthase subunit delta, mitochondrial OS=Kluyveromyces lactis GN=ATP16 PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.418e-17
Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 1
Query:  262 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPLDQIDPSLVQKGLAEFNQKLISA 579
            L + F LP+ +  S   V  V +PA +GQ+G+L  HVPT+ +L PGV+ V +G+ +KK+FVS GFA +  +S   I +VEA PL+   P  V+  LAE  + + SA
Sbjct:   31 LKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVPGVVEVLEGSSSKKFFVSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSSA 136          
BLAST of EY744395 vs. ExPASy Swiss-Prot
Match: ATPD_DICDI (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 1
Query:  262 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPLDQIDPSLVQKGLAEFNQ 564
            LT + + P+ +    K+  +V +P + G  GV   HVP IAELKPGV+ + H+  D +K+F+S GFAF++ ++   I  +EAVP+DQ+D   V+ GLA + Q
Sbjct:   37 LTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDLEKFFISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQ 138          
BLAST of EY744395 vs. ExPASy Swiss-Prot
Match: ATPD_YEAST (ATP synthase subunit delta, mitochondrial OS=Saccharomyces cerevisiae GN=ATP16 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.894e-16
Identity = 42/108 (38.89%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  256 SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPLDQIDPSLVQKGLAEFNQKLISA 579
            S L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G+++KK+F+S GFA +  +S   + A+EA PL+      ++  LAE  + + S+
Sbjct:   30 SGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSS 137          
BLAST of EY744395 vs. ExPASy Swiss-Prot
Match: ATPD_ASHGO (ATP synthase subunit delta, mitochondrial OS=Ashbya gossypii GN=ATP16 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.936e-16
Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 1
Query:  262 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPLDQIDPSLVQKGLAE 555
            L +NF LP+ +  +   V  V +P  TGQ+G+L  HVP + +L PGV+ V +G+++KK+FVS GFA +  +S   I +VEA PLD      V+  LAE
Sbjct:   30 LKLNFALPHETLFAGTAVKQVNLPVKTGQIGILANHVPIVEQLVPGVVEVLEGSESKKFFVSGGFATVQPDSTLSITSVEAFPLDSFSAENVRALLAE 127          
BLAST of EY744395 vs. ExPASy Swiss-Prot
Match: ATPD_AGABI (ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus GN=atpD PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.100e-15
Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  250 IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPLDQIDPSLVQKGLAEFNQ 564
            I  KL ++  LP+ +  S+++V  V +PA +G MG+L  HVP+I  L+PGV+ V + + ++K+FVS GFA +H N+   I  VEA PL+      ++  L E N+
Sbjct:   28 ISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDSGSQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANK 132          
BLAST of EY744395 vs. ExPASy Swiss-Prot
Match: ATPD_BOVIN (ATP synthase subunit delta, mitochondrial OS=Bos taurus GN=ATP5D PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 42/119 (35.29%), Postives = 65/119 (54.62%), Query Frame = 1
Query:  235 QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPLDQIDPSLVQKGLAEFNQKLISATTD 588
            Q P + P +++  F  P     ++  V  V VP  TG  G+L  HVPT+  L+PG++ VH +   T KYFVSSG   ++A+S   ++A EAV LD +D    +  L +   +L+ A  +
Sbjct:   29 QAPAAGPGQMSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADE 147          
BLAST of EY744395 vs. ExPASy Swiss-Prot
Match: ATPD_MOUSE (ATP synthase subunit delta, mitochondrial OS=Mus musculus GN=Atp5d PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.671e-13
Identity = 41/117 (35.04%), Postives = 62/117 (52.99%), Query Frame = 1
Query:  241 PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPLDQIDPSLVQKGLAEFNQKLISATTD 588
            P + P +++  F  P      +  V  V VP  TG  G+L  HVPT+  L+PG++ VH +   T KYFVSSG   ++A+S   ++A EAV LD +D    +  L +   +L  A  +
Sbjct:   31 PAAGPGQMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGTTTKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADE 147          
The following BLAST results are available for this feature:
BLAST of EY744395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ATP4_ARATH1.238e-6773.03ATP synthase subunit delta', mitochondrial OS=Arab... [more]
ATP4_IPOBA3.049e-6671.91ATP synthase subunit delta', mitochondrial OS=Ipom... [more]
ATP4_PEA7.274e-6067.43ATP synthase subunit delta', mitochondrial OS=Pisu... [more]
ATPD_KLULA3.418e-1742.45ATP synthase subunit delta, mitochondrial OS=Kluyv... [more]
ATPD_DICDI5.831e-1741.18ATP synthase subunit delta, mitochondrial OS=Dicty... [more]
ATPD_YEAST2.894e-1638.89ATP synthase subunit delta, mitochondrial OS=Sacch... [more]
ATPD_ASHGO4.936e-1642.86ATP synthase subunit delta, mitochondrial OS=Ashby... [more]
ATPD_AGABI1.100e-1539.05ATP synthase subunit delta, mitochondrial OS=Agari... [more]
ATPD_BOVIN2.709e-1435.29ATP synthase subunit delta, mitochondrial OS=Bos t... [more]
ATPD_MOUSE6.671e-1335.04ATP synthase subunit delta, mitochondrial OS=Mus m... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-B07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744395 ID=EY744395; Name=EY744395; organism=Citrus sinensis; type=EST; length=955bp
CCACGCGTCCGCAAACCAAACACTTCCAAAAGCTAATCAACGCTCTCGCC
GAAAATGTTCCGGCAAGCTTCACGCCTCTTGGCTCGAGCCAGCGCGGTGA
CAAGGTCTCGCGCCTTCTCATCGGAGGTCCCAGCCACGCCCGCCGTTGAT
TCGACTTTCGTTGAGTCATGGAAGAAAGTGAATCCAATCATGGAGCCGCC
AAAGACTCCATCGGTTTACATGACCCCTCGCCCACAAACCCCCACTTCAA
TCCCCTCCAAGCTCACCGTCAACTTCGTCCTTCCCTACGCCTCTGAGCTC
TCCGCTAAGGAGGTCGATATGGTTATAGTTCCAGCATCAACTGGGCAAAT
GGGTGTTCTGCCTGGACATGTACCTACAATTGCAGAACTAAAGCCTGGAG
TCTTATCGGTTCATGATGGTAATGATACCAAGAAATACTTTGTTAGCAGT
GGGTTTGCATTTATCCATGCAAACTCTGTTGCAGACATAATCGCTGTTGA
GGCTGTGCCACTCGACCAAATTGACCCCAGCTTGGTCCAGAAGGGCCTTG
CAGAGTTCAACCAGAAGCTTATTTCAGCTACAACTGACCCTGGAGAAAGT
TGAAGCTCAGATAGGGGGTGAATGGTTCAAGGGGAACTCAACTCTGCATC
TAACGGGGTAATTTTCTTCTAACTTCCAATTTTTCTCCATTTTGCTTTTT
TATTATTGAGTTGGTTTTGGGGGTTTTTCNCCCCTCCCAGGGACCTCTNC
AAGGGTCCATAGGATTTGTGGAAAAATAGTTTTTCACGGCTTTTTCCCCG
AAGACGACAAAAACACCATACCGAAAAAGAGAGGAACCCCGCTCTAGCGA
TTTATATTCAAGAAAATTGGATGGCGGGAGGGGAAAATTAGGCCGAAAAT
TGCGTCTTTCGGGCGCCCGCGGAGTAACTAGAAATGGCGAGACAACATTC
CTCAC
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