EY744393

Overview
NameEY744393
Unique NameEY744393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2874 contig Csv1_Contig2874:26..964. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.156e-24
Identity = 65/161 (40.37%), Postives = 93/161 (57.76%), Query Frame = 2
Query:   11 GHDVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            G D DGI++   S H+WID C L    DGLID+   ST +T+S  YFTQHDK ML+G D S++GD+ +RVTI    F  G  +R PR+R G  H+ NN    W +YA+  S    I+S+ N Y    +KR+ +  T++     ++K     +  D+F+ GA
Sbjct:  165 GMDGDGIRVF-QSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGN-YFVAPEKRSSKQVTKRMMAGPDSKRWKWGTSRDVFMNGA 323          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL21_ARATH (Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.156e-24
Identity = 69/160 (43.12%), Postives = 89/160 (55.62%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAAD-KLEAKSGLIRSEGDIFLKGA 490
            D DGI I   SR IWID C+L    DGLID    STDIT+S  Y   H++ ML+G    + GDR +RVTI    F +G  QR PR R G  H+ NN  R+W +YA+  S    I+SQ N++ A   + T E    ++AD   E K    +SEGD  + GA
Sbjct:  189 DGDGISIF-ESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHSDEYSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSANPTIFSQGNVFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGDEMVNGA 347          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.934e-23
Identity = 69/168 (41.07%), Postives = 92/168 (54.76%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGAQAQLLTGVG 517
            D DGI I    ++IW+D CSL +  DGLID    ST IT+S  YFT HDK ML+G   S   D+ ++VT+    F +G  QR PR R G  H+ NN   +W +YA+  S    I SQ N + A  +K   E    + A + + +S   RSEGD+ L GA  +  TG G
Sbjct:  200 DGDGISIF-GGKNIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFR-QTGAG 365          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.183e-22
Identity = 71/195 (36.41%), Postives = 97/195 (49.74%), Query Frame = 2
Query:   50 RHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGAQAQLLTGVGEECVFHPSEYYPTWTMEAPSDSLKQILQICTGWQSIPR 631
            +H+WID CSL + DDGLID    ST IT+S  + T HDK ML+G   S+  D+ ++VTI    F +G  QR PR R G  H+ NN   +W +YA+  S    IYSQ N + A   +   E    + A + + +    RSEGD+ L GA  +      E     PS Y    ++ A   SL   +    G  S  R
Sbjct:  217 KHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFR------ESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRR 405          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.018e-22
Identity = 65/167 (38.92%), Postives = 93/167 (55.69%), Query Frame = 2
Query:    8 RGHDVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAG---QKKR--TFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            +G D D I I  +S HIWID C      DGLID+   ST +T+S  YFTQHDK ML+G + ++V D+ +RVTI    F  G  +R PR+R G  H+ NN    W +YA+  S +  I+S+ N + A     KK+  +F+  T++     + K    R+  D+F  GA
Sbjct:  179 KGSDGDAIAIFDSS-HIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFVASDDPSKKQVSSFKIVTKRIDSGYDWKRWKWRTSKDVFKNGA 344          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL_ZINEL (Pectate lyase OS=Zinnia elegans PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.442e-22
Identity = 68/159 (42.77%), Postives = 87/159 (54.72%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D DGI I   S+ IWID  SL +  DGLID    ST IT+S  Y T HDK ML+G   S+  D+ ++VTI    F +G  QR PR R G  H+ NN   +W +YA+  S    IYSQ N + A   +   E    + A + E K+   RSEGD+ L GA
Sbjct:  199 DGDGISIFA-SKDIWIDHNSLSNCHDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGA 356          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.442e-22
Identity = 64/159 (40.25%), Postives = 89/159 (55.97%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D DG+ I   S H+W+D CSL + +DGLID  R ST IT+S  Y T H+K ML+G   ++  D+ ++VTI    F +G  QR PR R G  H+ NN   +W +YA+  S    I SQ N + A     + E    + A + E ++   RSEGD+ L GA
Sbjct:  228 DGDGVSIFGGS-HVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGA 385          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.442e-22
Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D DGI I  +S HIWID  SL +  DGLID    ST IT+S  YFT H++ ML+G   ++  D+ ++VTI +  F +G  QR PR R G  H+ NN   +W +YA+  S    I SQ N Y A + +   E      A + + +    RSEGD+FL GA
Sbjct:  215 DGDGISIFGSS-HIWIDHNSLSNCADGLIDAVMASTAITISNNYFTHHNEVMLLGHSDTYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAPRNRFAKEVTKRDYAGQWQWRHWNWRSEGDLFLNGA 372          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL_LILLO (Pectate lyase OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.870e-22
Identity = 65/159 (40.88%), Postives = 87/159 (54.72%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLFD-GTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D DGI I  +S +IWID  SL    DGLID+   ST IT+S C+ T+HD  ML+GA  ++  D  ++VT+    F  G  QR PR R+G VH+ NN   +W +YAV  S    I SQ N Y A   +   E      A+  E      +S+GD+F+ GA
Sbjct:  232 DGDGISIIGSS-NIWIDHVSLARCSDGLIDVILGSTAITISNCHLTEHDDVMLLGASDTYTQDEIMQVTVAFNHFGRGLVQRMPRCRYGFVHVVNNDYTHWIMYAVGGSQHPTIISQGNRYIAPHIEAAKEVTKRDYAEPAEWSKWTWKSQGDLFVSGA 389          
BLAST of EY744393 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.308e-21
Identity = 66/159 (41.51%), Postives = 85/159 (53.46%), Query Frame = 2
Query:   17 DVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTQHDKTMLIGADPSHVGDRCIRVTIHHCLF-DGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKRTFEYYTEKAADKLEAKSGLIRSEGDIFLKGA 490
            D D + I  +S HIWID  SL    DGL+D    ST ITVS  +FT H++ ML+G   S+  D+ ++VTI +  F +G  QR PR R G  H+ NN   +W +YA+  S E  I SQ N Y A   +   E       D  E K    RSEGD+ L GA
Sbjct:  268 DGDAVSIFGSS-HIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGA 425          
The following BLAST results are available for this feature:
BLAST of EY744393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PEL4_ARATH2.156e-2440.37Probable pectate lyase 4 OS=Arabidopsis thaliana G... [more]
PEL21_ARATH2.156e-2443.13Putative pectate lyase 21 OS=Arabidopsis thaliana ... [more]
PEL18_SOLLC6.934e-2341.07Probable pectate lyase P18 OS=Solanum lycopersicum... [more]
PEL11_ARATH1.183e-2236.41Putative pectate lyase 11 OS=Arabidopsis thaliana ... [more]
PEL2_ARATH2.018e-2238.92Putative pectate lyase 2 OS=Arabidopsis thaliana G... [more]
PEL_ZINEL3.442e-2242.77Pectate lyase OS=Zinnia elegans PE=1 SV=1[more]
PEL22_ARATH3.442e-2240.25Probable pectate lyase 22 OS=Arabidopsis thaliana ... [more]
PEL20_ARATH3.442e-2241.51Probable pectate lyase 20 OS=Arabidopsis thaliana ... [more]
PEL_LILLO5.870e-2240.88Pectate lyase OS=Lilium longiflorum PE=2 SV=1[more]
PEL15_ARATH1.308e-2141.51Probable pectate lyase 15 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-B05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744393 ID=EY744393; Name=EY744393; organism=Citrus sinensis; type=EST; length=940bp
AGGTGGTAGAGGACATGATGTTGATGGCATTCAAATTAAGCCGAATTCTA
GGCACATATGGATAGATCGGTGCAGCCTTCGTGATTATGATGATGGACTT
ATTGACATTACCAGGCAAAGCACAGATATTACTGTTTCTAGATGTTACTT
CACACAACATGACAAGACAATGCTTATTGGAGCAGACCCTTCTCATGTCG
GAGATAGATGCATCCGAGTTACCATTCACCATTGTCTTTTTGATGGGACA
CGCCAAAGACATCCACGCCTTAGATTTGGGAAGGTTCACCTGTACAATAA
TTACACTAGGAACTGGGGCATTTATGCTGTTTGTGCAAGTGTGGAATCCC
AGATATACTCCCAATGCAATATATATGAAGCAGGACAAAAGAAAAGGACT
TTTGAATATTATACAGAGAAGGCAGCGGACAAGCTTGAGGCAAAGTCTGG
CTTGATACGATCAGAAGGAGACATATTCCTGAAAGGAGCACAAGCACAAT
TATTGACAGGGGTAGGGGAAGAATGTGTATTCCATCCGAGTGAATACTAT
CCAACGTGGACTATGGAAGCACCCTCAGACTCTCTTAAACAAATTCTCCA
AATCTGTACAGGCTGGCAATCGATTCCTAGACCAGCAGATGTGATGATAG
CTAATTACCTTTTCAATATCTTCATTGTGCCCCCTGCATGCATGATGAAT
AATATATGTCCCTGCTTTGGTGCTTTTATTTTTCCCCCAGAAAAAGGGGG
AAAAAAAAAAAAAAAAAATTTGGAATTTCCAGGGGTTAAATTGGGGTTGC
CCCCTTTGGGGTAAAAAAAATTCCTTTCCCTTGGGCCCAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAGGGGGGGGCCCCCCCCAAAAAAGGAAAACAC
AATCTTTAATGATACCCGGGGGGGTGGGGGAAAGATATTA
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