EY744387

Overview
NameEY744387
Unique NameEY744387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744387 vs. ExPASy Swiss-Prot
Match: HIBCH_HUMAN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.594e-16
Identity = 54/170 (31.76%), Postives = 92/170 (54.12%), Query Frame = 2
Query:  119 QFLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLA*YLEKWEKDDRAKLVIVKGV-GRAFSAGGDLKMFYDGRNSEDSCLEVIY-TMYWLCHHIHTYKKTQVALAHGITMGGSASLMGSSEILSCSGKNCFFHSPKQELGLLMLVG 622
            +F +F+  N ++  +      +  E+V+L E+ G   ++TLNRP+ LN ++  ++  +   L+KWE+D    L+I+KG  G+AF AGGD+++  +   ++     V +   Y L + + + +K  VAL HGITMGG   L    +    + K C F  P+  +GL   VG
Sbjct:   12 RFNAFKRTNTILHHLRMSKHTDAAEEVLL-EKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEK-CLFAMPETAIGLFPDVG 179          
BLAST of EY744387 vs. ExPASy Swiss-Prot
Match: HIBCH_BOVIN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.550e-16
Identity = 54/170 (31.76%), Postives = 94/170 (55.29%), Query Frame = 2
Query:  119 QFLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLA*YLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSEDSCLEVIY-TMYWLCHHIHTYKKTQVALAHGITMGGSASLMGSSEILSCSGKNCFFHSPKQELGLLMLVG 622
            +F S++  N+++  +      +   +V+L E  G   ++TLNRPR LN ++  ++  +   L+KWE+D +  L+I+KG G +AF AGGD++   + RN+    L+ ++   Y L + I + +K  +AL HGITMGG   +    +    + K+  F  P+  +GL   VG
Sbjct:   12 RFNSYKRTNIILQHLKMSNHTDAAAEVLL-ERKGCAGVITLNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTFLIIIKGAGEKAFCAGGDIRALSEARNTNQKMLQDLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKS-VFAMPETAIGLFPDVG 179          
BLAST of EY744387 vs. ExPASy Swiss-Prot
Match: HIBCH_DANRE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 51/143 (35.66%), Postives = 80/143 (55.94%), Query Frame = 2
Query:  200 VLGEEIGNVRLVTLNRPRQLNVISSKVVSLLA*YLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSEDSCLEVIY-TMYWLCHHIHTYKKTQVALAHGITMGGSASLMGSSEILSCSGKNCFFHSPKQELGLLMLVG 622
            VL E++G   ++TLNRP+ LN ++  ++  +   L+KW+KD    +VI+KG G +AF AGGD++   +   + +   +V +   Y L + I TY+K  VAL +GITMGG   L    +    + K   F  P+  +GL   VG
Sbjct:   34 VLFEKVGKAGVITLNRPKALNALTLNMIRHIYPQLKKWDKDSETDIVIIKGAGEKAFCAGGDIRAIAEAGKAGNLLSQVFFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQFRVATEKT-LFAMPETGIGLFPDVG 175          
BLAST of EY744387 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.695e-15
Identity = 53/137 (38.69%), Postives = 73/137 (53.28%), Query Frame = 2
Query:  218 GNVRLVTLNRPRQLNVISSKVVSLLA*YLEKWEKDDRAKLVIVKGV-GRAFSAGGDLKMFYDGRNSEDSCLEVIY-TMYWLCHHIHTYKKTQVALAHGITMGGSASLMGSSEILSCSGKNCFFHSPKQELGLLMLVG 622
            G   ++TLNRP+ LN ++  ++ L+   L  WE+D    LVI+KGV G+AF AGGD++   D   + D   +  +   Y L + I TYKK  VAL  GITMGG   L         S +N  F  P+  +GL   VG
Sbjct:   43 GCAGVITLNRPKALNALNLGMIRLIYPQLGLWEEDPETYLVIIKGVGGKAFCAGGDIRAVTDAGKAGDRLAQDFFREEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVAS-ENTLFAMPETAIGLFPDVG 178          
BLAST of EY744387 vs. ExPASy Swiss-Prot
Match: HIBCH_CHICK (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.668e-14
Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 2
Query:  200 VLGEEIGNVRLVTLNRPRQLNVISSKVVSLLA*YLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYD-GRNSEDSCLEVIYTMYWLCHHIHTYKKTQVALAHGITMGGSASLMGSSEILSCSGKNCFFHSPKQELGLLMLVG 622
            VL ++ G   ++TLNRP+ LN +S K++  +   ++ WE+D    L+I+KG G +AF AGGD++   D G+  +    +     Y L + I T KK  VAL  GITMGG   L         + K   F  P+  +GL   VG
Sbjct:   37 VLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKAWEQDPETFLIIIKGTGEKAFCAGGDVRAIADAGKAGDTMTRDYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKT-VFAMPETAIGLFPDVG 178          
BLAST of EY744387 vs. ExPASy Swiss-Prot
Match: HIBCH_SCHPO (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Schizosaccharomyces pombe GN=ehd3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14
Identity = 52/147 (35.37%), Postives = 78/147 (53.06%), Query Frame = 2
Query:  122 FLSFESANLLID*MAQGVVKNP------DEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLA*YLEKWEKDDRAKLVIVKGVGRAFSAGGDLK----MFYDGRNSEDSCLEVIYTMYWLCHHIHTYKKTQVALAHGITMGGSASL 532
            FLS  +++     M++  ++NP          VL E     R+ TLNRP+ LN I+  ++  +   L   E+ + AK++I+KG GR+FS+GGD+K       DG+  E          Y L H + TY+K  VAL +GITMGG + L
Sbjct:   30 FLSLNASST----MSRAFIRNPKFYSTSSNDTVLYESKNGARIFTLNRPKVLNAINVDMIDSILPKLVSLEESNLAKVIILKGNGRSFSSGGDIKAAALSIQDGKLPE--VRHAFAQEYRLSHTLATYQKPVVALMNGITMGGGSGL 170          
BLAST of EY744387 vs. ExPASy Swiss-Prot
Match: HIBCH_RAT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.263e-13
Identity = 53/170 (31.18%), Postives = 90/170 (52.94%), Query Frame = 2
Query:  119 QFLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLA*YLEKWEKDDRAKLVIVKGV-GRAFSAGGDLKMFYDGRNSEDSCLEVIY-TMYWLCHHIHTYKKTQVALAHGITMGGSASLMGSSEILSCSGKNCFFHSPKQELGLLMLVG 622
            +F S   A++++  +     K+ +   VL E  G   ++TLNRP+ LN +S  ++  +   L+KWE+D    L+I+KG  G+AF AGGD+K   + + +  +  + ++   Y L + I + +K  VAL  GITMGG   L    +    + ++  F  P+  +GL   VG
Sbjct:   12 RFSSIRRASVILQHLRMS--KHTETAEVLLERRGCAGVITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQTLSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERS-LFAMPETGIGLFPDVG 178          
BLAST of EY744387 vs. ExPASy Swiss-Prot
Match: HIBCH_MOUSE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.381e-12
Identity = 52/167 (31.14%), Postives = 87/167 (52.10%), Query Frame = 2
Query:  128 SFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLA*YLEKWEKDDRAKLVIVKGV-GRAFSAGGDLKMFYDGRNSEDSCLEVIY-TMYWLCHHIHTYKKTQVALAHGITMGGSASLMGSSEILSCSGKNCFFHSPKQELGLLMLVG 622
            SF  A++++  +   +     E  VL E  G   ++TLNRP+ LN +S  ++  +   L+ WE+D    L+I+KG  G+AF AGGD+K   + + +  +  + ++   Y L + I + +K  VAL  GITMGG   L    +    + ++  F  P+  +GL   VG
Sbjct:   15 SFRRASVILQHLRMSMHTEAAE--VLLERRGCGGVITLNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKARQNLTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERS-LFAMPETGIGLFPDVG 178          
BLAST of EY744387 vs. ExPASy Swiss-Prot
Match: HIBCH_XENLA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.062e-12
Identity = 49/137 (35.77%), Postives = 70/137 (51.09%), Query Frame = 2
Query:  218 GNVRLVTLNRPRQLNVISSKVVSLLA*YLEKWEKDDRAKLVIVKGV-GRAFSAGGDLKMFYD-GRNSEDSCLEVIYTMYWLCHHIHTYKKTQVALAHGITMGGSASLMGSSEILSCSGKNCFFHSPKQELGLLMLVG 622
            G   ++TLNRP+ LN ++  ++  +   L+ WE+D    LVI+KG  G+AF AGGD++   D G+  +    +     Y L + I T KK  VA+  GITMGG   L         S K   F  P+  +GL   VG
Sbjct:   43 GCAGVITLNRPKALNALNLGMIRQIYPQLKLWEEDPETYLVIIKGAGGKAFCAGGDIRAVTDAGKVGDRLAQDFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKT-LFAMPETAIGLFPDVG 178          
The following BLAST results are available for this feature:
BLAST of EY744387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
HIBCH_HUMAN1.594e-1631.763-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_BOVIN3.550e-1631.763-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_DANRE6.056e-1635.663-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENTR6.695e-1538.693-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_CHICK5.668e-1435.663-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_SCHPO9.668e-1435.373-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_RAT1.263e-1331.183-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_MOUSE2.381e-1231.143-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENLA4.062e-1235.773-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-A11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744387 ID=EY744387; Name=EY744387; organism=Citrus sinensis; type=EST; length=915bp
AAACCAAGTGTATTATTTTTTCATTCTTCTTCATGTAATACATTCATTTT
GGTTATATGTACACTCAATTTCGTGTTGTGACATTGTAAATGAACAATGA
TTCAATCCATTCCTGGTGCAGTTTCTTAGCTTTGAATCAGCTAACCTACT
AATTGACTAAATGGCGCAAGGTGTTGTTAAGAACCCAGATGAGCAGGTTG
TTCTTGGAGAAGAAATAGGCAATGTGAGACTGGTCACCTTAAACCGGCCT
CGCCAATTGAATGTCATCTCATCTAAAGTGGTGTCTCTATTGGCATAATA
CTTGGAAAAATGGGAAAAAGATGACCGAGCTAAGCTTGTAATAGTCAAGG
GAGTTGGCCGAGCTTTTTCTGCTGGTGGGGATTTGAAAATGTTTTATGAT
GGGAGGAACTCAGAGGATTCCTGCCTCGAAGTGATCTATACAATGTATTG
GCTTTGCCATCACATTCATACCTATAAGAAAACCCAGGTAGCTCTTGCTC
ATGGAATTACAATGGGAGGAAGCGCGTCTTTGATGGGTTCCTCTGAAATT
CTCAGTTGCTCCGGAAAAAACTGTTTTTTCCACTCCCCAAAGCAGGAATT
GGGTTTACTAATGCTTGTGGGTTTCCACTCCCCCCATTCCTCCCCCCCCT
GGAAATTTAAGGGGAATTCCCGAGCCTCTAACTGGGGCCAAGGGTAAATT
GGCAAGGAAAATGGGTCACAACTGGGGCCTAGGCAACCCCATTTTTGTTC
CCTTTGTAAAAAAATTGGCCCTGAAATACAAAAAAGCGTATAATAACGTT
TACACATCCGTCAAATTAAAATTACAAACGCCATATCCCCACTTGTAAAG
AATCTCTCTGCGAGGGATGACACGTATGTTCGCGATCACGACACGGCTAC
TTNTACAAACACGCC
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