EY744348

Overview
NameEY744348
Unique NameEY744348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length978
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744348 vs. ExPASy Swiss-Prot
Match: TIR1_ARATH (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.907e-41
Identity = 68/115 (59.13%), Postives = 86/115 (74.78%), Query Frame = 2
Query:  104 VTASFPDEVLEIVLSLLTSHRDRSSVSLVCKDWYRAERWSRTQVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHAWLVAFAAKYPFLEELRLKRMAVSD 448
            +  SFP+EVLE V S +   +DR+SVSLVCK WY  ERW R +VFIGNCY+VSP  + RRFP +RSV LKGKP F+DFNLVP  WG  ++ W+ A ++ Y +LEE+RLKRM V+D
Sbjct:    5 IALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTD 119          

HSP 2 Score: 38.5058 bits (88), Expect = 1.907e-41
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 1
Query:  511 CDGFSTGWALLPIATHCKNLTELDLQKNGIEKYQGEVGLGLFPPETFTSL 660
            C+GFST   L  IA  C+NL ELDL+++ ++   G   L  F P+T+TSL
Sbjct:  140 CEGFSTD-GLAAIAATCRNLKELDLRESDVDDVSGH-WLSHF-PDTYTSL 186          
BLAST of EY744348 vs. ExPASy Swiss-Prot
Match: AFB3_ARATH (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 4.221e-41
Identity = 67/111 (60.36%), Postives = 86/111 (77.48%), Query Frame = 2
Query:  116 FPDEVLEIVLSLLTSHRDRSSVSLVCKDWYRAERWSRTQVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHAWLVAFAAKYPFLEELRLKRMAVSD 448
            FPDEV+E V   + SH+DR+S+SLVCK W++ ER+SR +VFIGNCY+++PE L RRFP ++S+TLKGKP F+DFNLVP  WG  +H W+ A A     LEELRLKRM V+D
Sbjct:    4 FPDEVIEHVFDFVASHKDRNSISLVCKSWHKIERFSRKEVFIGNCYAINPERLIRRFPCLKSLTLKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEELRLKRMVVTD 114          

HSP 2 Score: 40.4318 bits (93), Expect = 4.221e-41
Identity = 23/55 (41.82%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  511 CDGFSTGWALLPIATHCKNLTELDLQKNGIEKYQGEVGLGLFPPETFTSLADTDF 675
            C+GF+T   L  IA +C++L ELDLQ+N I+ ++G+  L  F P++ T+L   +F
Sbjct:  135 CEGFTTD-GLASIAANCRHLRELDLQENEIDDHRGQ-WLNCF-PDSCTTLMSLNF 186          
BLAST of EY744348 vs. ExPASy Swiss-Prot
Match: AFB2_ARATH (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 9.336e-41
Identity = 67/111 (60.36%), Postives = 86/111 (77.48%), Query Frame = 2
Query:  116 FPDEVLEIVLSLLTSHRDRSSVSLVCKDWYRAERWSRTQVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHAWLVAFAAKYPFLEELRLKRMAVSD 448
            FPDEV+E V   +TSH+DR+++SLVCK WY+ ER+SR +VFIGNCY+++PE L RRFP ++S+TLKGKP F+DFNLVP  WG  +  W+ A A     LEELRLKRM V+D
Sbjct:    4 FPDEVIEHVFDFVTSHKDRNAISLVCKSWYKIERYSRQKVFIGNCYAINPERLLRRFPCLKSLTLKGKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTD 114          

HSP 2 Score: 40.817 bits (94), Expect = 9.336e-41
Identity = 23/55 (41.82%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  511 CDGFSTGWALLPIATHCKNLTELDLQKNGIEKYQGEVGLGLFPPETFTSLADTDF 675
            C+GF+T   L  IA +C++L +LDLQ+N I+ ++G+  L  F P+T T+L   +F
Sbjct:  135 CEGFTTD-GLASIAANCRHLRDLDLQENEIDDHRGQ-WLSCF-PDTCTTLVTLNF 186          
BLAST of EY744348 vs. ExPASy Swiss-Prot
Match: TIR1B_ORYSJ (Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica GN=Os04g0395600 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.430e-37
Identity = 63/111 (56.76%), Postives = 80/111 (72.07%), Query Frame = 2
Query:  116 FPDEVLEIVLSLLTSHRDRSSVSLVCKDWYRAERWSRTQVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHAWLVAFAAKYPFLEELRLKRMAVSD 448
            FP+EV+E + S L + RDR++VSLVCK WY  ER SR  VF+GNCY+V    +  RFPN+R++T+KGKP F+DFNLVPP+WG     W+ A A     LEELR+KRM VSD
Sbjct:    4 FPEEVVEHIFSFLPAQRDRNTVSLVCKVWYEIERLSRRGVFVGNCYAVRAGRVAARFPNVRALTVKGKPHFADFNLVPPDWGGYAGPWIEAAARGCHGLEELRMKRMVVSD 114          

HSP 2 Score: 43.1282 bits (100), Expect = 4.430e-37
Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 1
Query:  511 CDGFSTGWALLPIATHCKNLTELDLQKNGIEKYQGEVGLGLFPPETFTSLADTDF 675
            C+GFST   L  +A+HCK L ELDLQ+N +E  +G   L  F P++ TSL   +F
Sbjct:  135 CEGFSTD-GLAAVASHCKLLRELDLQENEVED-RGPRWLSCF-PDSCTSLVSLNF 186          
BLAST of EY744348 vs. ExPASy Swiss-Prot
Match: GRH1_ARATH (GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.521e-33
Identity = 65/111 (58.56%), Postives = 84/111 (75.68%), Query Frame = 2
Query:  116 FPDEVLEIVLSLLTSHRDRSSVSLVCKDWYRAERWSRTQVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHAWLVAFAAKYPFLEELRLKRMAVSD 448
            FP +VLE +LS + S+ DR+SVSLVCK W+  ER +R +VF+GNCY+VSP  +TRRFP +RS+TLKGKP F+D+NLVP  WG     W+ A AAK   LEE+R+KRM V+D
Sbjct:    5 FPPKVLEHILSFIDSNEDRNSVSLVCKSWFETERKTRKRVFVGNCYAVSPAAVTRRFPEMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEIRMKRMVVTD 115          
BLAST of EY744348 vs. ExPASy Swiss-Prot
Match: FBX14_ARATH (F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.338e-32
Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 2
Query:  122 DEVLEIVLSLLTSHRDRSSVSLVCKDWYRAERWSRTQVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHAWLVAFAAKYPFLEELRLKRMAVSD 448
            + VLE VL  LTS  DR++VSLVC+ WYR E  +R +VFIGNCYS+SP  L  RF  +RS+ LKGKPRF+DFNL+PPNWGA    W+ A A  YP+LE++ LKRM V+D
Sbjct:   56 ENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRSLVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTD 164          
BLAST of EY744348 vs. ExPASy Swiss-Prot
Match: TIRC_ORYSJ (Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.816e-32
Identity = 60/111 (54.05%), Postives = 77/111 (69.37%), Query Frame = 2
Query:  116 FPDEVLEIVLSLLTSHRDRSSVSLVCKDWYRAERWSRTQVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHAWLVAFAAKYPFLEELRLKRMAVSD 448
            FP+EV+E +L  L SHRDR++VSLVC++WYR ER SR  V + NCY+  PE +  RFP +RS+++KG+PRF     VP  WGA    W+ A  A  P LEELRLKRM V+D
Sbjct:    4 FPEEVVEHILGFLASHRDRNAVSLVCREWYRVERLSRRSVLVRNCYAARPERVHARFPGLRSLSVKGRPRF-----VPAGWGAAARPWVAACVAACPGLEELRLKRMVVTD 109          

HSP 2 Score: 33.8834 bits (76), Expect = 3.816e-32
Identity = 19/43 (44.19%), Postives = 26/43 (60.47%), Query Frame = 1
Query:  511 CDGFSTGWALLPIATHCKNLTELDLQKNGIEKYQGEVGLGLFP 639
            C GFST   L  +AT+C+ + ELDLQ++ +E       LG FP
Sbjct:  130 CQGFSTD-GLATVATNCRFMKELDLQESLVEDRDSR-WLGCFP 170          
BLAST of EY744348 vs. ExPASy Swiss-Prot
Match: TIR1L_ARATH (Transport inhibitor response 1-like protein OS=Arabidopsis thaliana GN=At5g49980 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.523e-31
Identity = 68/129 (52.71%), Postives = 90/129 (69.77%), Query Frame = 2
Query:   80 SPNTAELAVTAS--FPDEVLEIVLS----LLTSHRDRSSVSLVCKDWYRAERWSRTQVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHAWLVAFAAKYPFLEELRLKRMAVSD 448
            SPN +   ++ S  FPD VLE VL      L S  DR++ SLVCK W+R E  +R++VFIGNCY++SP  LT+RF  +RS+ LKGKPRF+DFNL+PP+WGA+   W+   A  YP LE++ LKRM V+D
Sbjct:   36 SPNKSRNCISNSQTFPDHVLENVLENVLQFLDSRCDRNAASLVCKSWWRVEALTRSEVFIGNCYALSPARLTQRFKRVRSLVLKGKPRFADFNLMPPDWGANFAPWVSTMAQAYPCLEKVDLKRMFVTD 164          
BLAST of EY744348 vs. ExPASy Swiss-Prot
Match: TIR1A_ORYSJ (Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. japonica GN=Os05g0150500 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.418e-30
Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 2
Query:  113 SFPDEVLEIVLSLLTSHRDRSSVSLVCKDWYRAERWSRTQVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHAWLVAFAAKYPFLEELRLKRMAVSD 448
            S PDEV E   S L +  DR + +  C  W RAER SR ++ + NCY+ +P     RFP++R+  +KGKP F+DF LVPP WGA    W+ A A  +P LEEL  KRM V+D
Sbjct:   19 SLPDEVWEHAFSFLPAAADRGAAAGACSSWLRAERRSRRRLAVANCYAAAPRDAVERFPSVRAAEVKGKPHFADFGLVPPAWGAAAAPWIAAAADGWPLLEELSFKRMVVTD 130          

HSP 2 Score: 38.891 bits (89), Expect = 4.418e-30
Identity = 29/58 (50.00%), Postives = 34/58 (58.62%), Query Frame = 1
Query:  511 CDGFSTGWALLPIATHCK---NLTELDLQKNGIEKYQGEVGLGLFPPETFTSLADTDF 675
            CDGFST   L  IA  C+   +L ELDLQ+N IE       L LF PE+FTSL   +F
Sbjct:  151 CDGFSTA-GLAAIAAGCRVGRHLRELDLQENEIEDCSIH-WLSLF-PESFTSLVTLNF 205          
BLAST of EY744348 vs. ExPASy Swiss-Prot
Match: COI1_ARATH (Coronatine-insensitive protein 1 OS=Arabidopsis thaliana GN=COI1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.136e-22
Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 2
Query:  122 DEVLEIVLSLLTSHRDRSSVSLVCKDWYRAERWSRTQVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHAWLVAFAAKYPFLEELRLKRMAVSD 448
            D+V+E V++ +T  +DR S SLVC+ W++ +  +R  V +  CY+ +P+ L+RRFPN+RS+ LKGKPR + FNL+P NWG  +  W+   +     L+ +  +RM VSD
Sbjct:   18 DDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSD 126          
The following BLAST results are available for this feature:
BLAST of EY744348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
TIR1_ARATH1.907e-4159.13Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidop... [more]
AFB3_ARATH4.221e-4160.36Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis tha... [more]
AFB2_ARATH9.336e-4160.36Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis tha... [more]
TIR1B_ORYSJ4.430e-3756.76Transport inhibitor response 1-like protein Os04g0... [more]
GRH1_ARATH3.521e-3358.56GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH... [more]
FBX14_ARATH1.338e-3259.63F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX... [more]
TIRC_ORYSJ3.816e-3254.05Transport inhibitor response 1-like protein Os11g0... [more]
TIR1L_ARATH2.523e-3152.71Transport inhibitor response 1-like protein OS=Ara... [more]
TIR1A_ORYSJ4.418e-3047.32Transport inhibitor response 1-like protein Os05g0... [more]
COI1_ARATH8.136e-2242.20Coronatine-insensitive protein 1 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-F05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744348 ID=EY744348; Name=EY744348; organism=Citrus sinensis; type=EST; length=978bp
CGGACGCGTGGGTTCATTTTCACATTATCAGTTATTTTTAGTTTTTTTTA
TGGAGTCCGAATCGAAACGGAAAAAGGAATCTCCAAACACGGCCGAGTTA
GCCGTGACGGCGTCGTTTCCGGACGAAGTACTGGAGATAGTGCTGTCTCT
CTTAACTTCGCACAGAGATCGGAGCTCCGTCTCTTTAGTTTGCAAGGACT
GGTACCGCGCGGAACGGTGGTCAAGGACTCAAGTATTTATCGGCAACTGC
TACTCTGTTTCCCCGGAGATTCTCACGCGCAGGTTCCCTAATATTCGGAG
CGTGACGTTGAAGGGGAAGCCGAGATTCTCGGATTTCAATTTGGTTCCAC
CTAATTGGGGCGCCGATATTCACGCTTGGCTTGTGGCGTTTGCTGCTAAG
TATCCTTTTCTTGAAGAGCTGAGGCTGAAGAGAATGGCTGTTAGTGATGA
GAGTTTGGAATTCTTGGCTTCTAATTTTTCCNCCTCGNNAGCTTCTTTCG
CCTTTTGAGCTGCGATGGCTTCAGTACTGGATGGGCTTTGCTGCCGATTG
CTACCCATTGCAAGAATTTGACTGAACTTGACCTCCAAAAAAACGGTATA
GAAAAATACCAGGGGGAAGTTGGGTTAGGCTTGTTTCCCCCGGAAACTTT
TACTTCATTGGCAGATACTGATTTTTGGCCATCCTTACTTGCCAAGTTTA
TAACCGACGGCCTTTGAGAAAAACCTGCCCCTCCGGGGACAATCATTTAG
ATGGAGTTAACGGATAACCAAAGAAGTTTTTCTTTCGGCCGCACTCGGAA
TGGGCGCGCATTTTCTCGGGTCACCACCAAAGAAAAGCCAACTCGGACAA
CGGGTGCCCACTTCGTGTCTAAATTTTACCGCCGCCCCCCCCCTGCTATA
CGACCAATTTTATAAGGGACAGGCCTTATCTAAGCCACCCGTGGGCGAAA
AAACAGGGACAACTCCGATAACGTCTTC
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