EY662787

Overview
NameEY662787
Unique NameEY662787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662787 vs. ExPASy Swiss-Prot
Match: SEC22_ARATH (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22 PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 5.231e-99
Identity = 179/188 (95.21%), Postives = 185/188 (98.40%), Query Frame = 1
Query:  283 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 846
            MVKMT+IARVTDGLPLAEGLDDGRDL D++MYKQQVKALFKNLSRGQN+ASRMS+ETGPYVFHYIIEGRVCYLTMCDR+YPKKLAFQYLEDLKNEFERVNG  IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL
Sbjct:    1 MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGQNDASRMSVETGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 188          
BLAST of EY662787 vs. ExPASy Swiss-Prot
Match: SC22B_RAT (Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b PE=1 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 3.012e-46
Identity = 94/189 (49.74%), Postives = 130/189 (68.78%), Query Frame = 1
Query:  283 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 846
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY662787 vs. ExPASy Swiss-Prot
Match: SC22B_PONAB (Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 3.012e-46
Identity = 94/189 (49.74%), Postives = 130/189 (68.78%), Query Frame = 1
Query:  283 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 846
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY662787 vs. ExPASy Swiss-Prot
Match: SC22B_MOUSE (Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 3.012e-46
Identity = 94/189 (49.74%), Postives = 130/189 (68.78%), Query Frame = 1
Query:  283 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 846
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY662787 vs. ExPASy Swiss-Prot
Match: SC22B_HUMAN (Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 3.012e-46
Identity = 94/189 (49.74%), Postives = 130/189 (68.78%), Query Frame = 1
Query:  283 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 846
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY662787 vs. ExPASy Swiss-Prot
Match: SC22B_CHICK (Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.934e-46
Identity = 93/189 (49.21%), Postives = 131/189 (69.31%), Query Frame = 1
Query:  283 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 846
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL++EF+  +G ++ T +RPY+FI+FDT+IQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDLQSEFDEQHGKKVPTVSRPYSFIEFDTYIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY662787 vs. ExPASy Swiss-Prot
Match: SC22B_CRIGR (Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b PE=1 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 1.952e-45
Identity = 93/189 (49.21%), Postives = 129/189 (68.25%), Query Frame = 1
Query:  283 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 846
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++  G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLGAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY662787 vs. ExPASy Swiss-Prot
Match: S22BB_DANRE (Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.819e-44
Identity = 90/192 (46.88%), Postives = 128/192 (66.67%), Query Frame = 1
Query:  283 MVKMTMIARVTDGLPLAEGLDDGRDL-RDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLIDR 855
            MV +TMIAR+ DGLPLA  + +   + RD + Y+ Q K LF+ L+  +   +R ++E G   FHY+IE  VCYL +C+  +PKKLAF YLEDL+ EF   +G ++ T +RPY+FI+FDT+IQKTKK Y D+R +RN++ +N EL +V +IM  N++EVL  GE L  +   +S L+S S+ Y   AK L  R
Sbjct:    1 MVLLTMIARLADGLPLAASMQEDEQMGRDLQQYQSQAKQLFRKLN--EQSPNRCTLEAGSMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQKTKKSYIDSRARRNLSNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTR 190          
BLAST of EY662787 vs. ExPASy Swiss-Prot
Match: SC22B_XENTR (Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.280e-44
Identity = 90/189 (47.62%), Postives = 129/189 (68.25%), Query Frame = 1
Query:  283 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 846
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHY+IE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FD +IQKTKK Y D+R +RN++ +N EL +V +IM  N++EVL  GE L  +   +S L++ S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQNQAKQLFRKLN--EQSPTRCTLEAGAMTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFDEQHGKKVPTVSRPYSFIEFDNYIQKTKKSYIDSRARRNLSSVNTELQDVQRIMVANIEEVLLRGEALSALDSKASNLSTLSKKYRQDAKYL 187          
BLAST of EY662787 vs. ExPASy Swiss-Prot
Match: S22BA_DANRE (Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.003e-41
Identity = 88/192 (45.83%), Postives = 124/192 (64.58%), Query Frame = 1
Query:  283 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLIDR 855
            MV  TMI RV D LPLA  + +D +  RD + Y+ Q K L + L+  +   +R ++E G   FHY+IE  VCYL +C+  +PKKLAF YLEDL+ EF    GA++ + +RPY+FI+FDT+IQKT K Y D+R +RN+  +N EL++V +IM  N++EVL  GE L  +   +S L+S S+ Y   AK L  R
Sbjct:    1 MVLQTMIVRVADSLPLAASMQEDEQSGRDLQKYQSQAKQLCRKLN--EQSPARCTLEAGKMCFHYVIEKGVCYLALCEAGFPKKLAFAYLEDLEGEFSEQYGAKVPSVSRPYSFIEFDTYIQKTIKSYIDSRARRNLGNINSELHDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTR 190          
The following BLAST results are available for this feature:
BLAST of EY662787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
SEC22_ARATH5.231e-9995.2125.3 kDa vesicle transport protein OS=Arabidopsis ... [more]
SC22B_RAT3.012e-4649.74Vesicle-trafficking protein SEC22b OS=Rattus norve... [more]
SC22B_PONAB3.012e-4649.74Vesicle-trafficking protein SEC22b OS=Pongo abelii... [more]
SC22B_MOUSE3.012e-4649.74Vesicle-trafficking protein SEC22b OS=Mus musculus... [more]
SC22B_HUMAN3.012e-4649.74Vesicle-trafficking protein SEC22b OS=Homo sapiens... [more]
SC22B_CHICK3.934e-4649.21Vesicle-trafficking protein SEC22b OS=Gallus gallu... [more]
SC22B_CRIGR1.952e-4549.21Vesicle-trafficking protein SEC22b OS=Cricetulus g... [more]
S22BB_DANRE2.819e-4446.88Vesicle-trafficking protein SEC22b-B OS=Danio reri... [more]
SC22B_XENTR6.280e-4447.62Vesicle-trafficking protein SEC22b OS=Xenopus trop... [more]
S22BA_DANRE1.003e-4145.83Vesicle-trafficking protein SEC22b-A OS=Danio reri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-048-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662787 ID=EY662787; Name=EY662787; organism=Citrus sinensis; type=EST; length=866bp
TTCGGTAGACCCCGCGTCCGAAGTTTAGTTGCCGTTGCGAAGATTAAAAG
ACCACATGATGTCTATGTTTTTGATTTAATTGATATGCCTCGGCGAGAAT
TGTGTTAAAGAAGCCAAAAAGTAATTATTTTGCTAGATATGTTACTTTCT
TTTGAGATTCTTTTTAGGGTTTAGGTTGAATTTCAGCTTTATTATCTTTT
TGTGGATCTGGGTTTCTGATGGCTTGACCTATTGCCATTGTAGTGATTTG
GTGTAGCAGAGGAATTTTAAAGTGAGGCAAAAATGGTGAAGATGACGATG
ATTGCCCGTGTTACTGATGGTCTTCCATTGGCGGAGGGACTGGATGATGG
TCGTGATTTGAGAGATGCTGAGATGTACAAGCAACAAGTCAAGGCCTTGT
TTAAGAATCTCTCGAGAGGCCAGAATGAGGCTTCAAGGATGTCAATTGAG
ACAGGACCTTATGTTTTCCATTATATCATTGAAGGACGTGTTTGTTACTT
GACAATGTGCGACCGTGCTTATCCCAAAAAGCTGGCCTTTCAATACTTGG
AAGACCTCAAGAACGAATTTGAGCGTGTTAATGGGGCTCAGATTGAAACT
GCTGCCAGGCCTTATGCTTTCATAAAATTTGATACATTCATACAGAAAAC
AAAGAAATTGTACCAGGACACACGTACCCAGCGGAATATTGCAAAGTTGA
ATGATGAACTTTATGAGGTCCACCAGATAATGACCCGGAATGTGCAGGAA
GTTCTTGGTGTTGGTGAAAAGTTGGACCAGGTCAGTGAAATGTCCAGTCG
GTTGACATCAGAGTCGCGCATTTATGCTGATAAGGCAAAAGATTTGATCG
ACAGGCTTTTATCGGA
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