EY662739

Overview
NameEY662739
Unique NameEY662739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662739 vs. ExPASy Swiss-Prot
Match: UBC25_ARATH (Probable ubiquitin carrier protein E2 25 OS=Arabidopsis thaliana GN=UBC25 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 6.216e-82
Identity = 144/240 (60.00%), Postives = 180/240 (75.00%), Query Frame = 1
Query:    4 FKLSDTVDDFSDHHYNRMGFLGEEKPPKNWAKKIQEEWKILERNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLGAMHFSHHAHDILVACEAYMEGAVVGHVNIKNGNPGVD 723
            FK  D V+DFSDHHY   G   ++   K+WAK+IQ+EW+ILE++LP+ IFVR  E+RM+LLRAV+IG  GTPYHDGLF FD  FP +YP+ PP V+Y+SGGLR+NPNLY+CGKVCLSLLGTW+G   E W  N STMLQVLVSIQ LILN KP+FNEPG+E+S     GE  S++Y+++ FI SLKTM+YT+R+PPK+FED    HF   AHD+L AC AY  GA  G+  +  G P V+
Sbjct:  305 FKRFDIVEDFSDHHYASKGTTSKQHS-KDWAKRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILNQKPYFNEPGYERSAGSAHGESTSKAYSENTFILSLKTMVYTMRRPPKYFEDFAYGHFFSCAHDVLKACNAYRNGATPGY--LVKGAPDVE 541          
BLAST of EY662739 vs. ExPASy Swiss-Prot
Match: UBC26_ARATH (Probable ubiquitin carrier protein E2 26 OS=Arabidopsis thaliana GN=UBC26 PE=2 SV=2)

HSP 1 Score: 301.597 bits (771), Expect = 4.029e-81
Identity = 143/253 (56.52%), Postives = 188/253 (74.31%), Query Frame = 1
Query:    4 FKLSDTVDDFSDHHYNRMGFLGEEKPPKNWAKKIQEEWKILERNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLGAMHFSHHAHDILVACEAYMEGAVVGHVNIKNGNPGVDLVKGSTSKELKTN 762
            FK  DTV+DFSDHHY   G    ++  KNW KK+Q +WKILE +LP+ I VR CE+RM+LLRAV+IG  GTPYHDGLF FD  FP +YP+ PP+V+Y+SGGLR+NPNLY+CGKVCLSLLGTW G + E W  N+STMLQ+LVSIQALILN KP+FNEPG+ +S     GE  S+ Y+++ F+ SLKTM+Y++R+PP+HFE+    H+   +HDI+ AC AY  GA +G + +K G   ++  + S SK+ KT+
Sbjct:  244 FKRFDTVEDFSDHHYASKG-KSSKQHSKNWVKKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQSAGTASGESKSKVYSENVFLLSLKTMVYSIRRPPQHFEEYVQNHYFVRSHDIVKACNAYKAGAPLGSM-VKGGVQDLEEARQSGSKKFKTD 494          
BLAST of EY662739 vs. ExPASy Swiss-Prot
Match: UBC24_ARATH (Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana GN=UBC24 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.752e-76
Identity = 133/237 (56.12%), Postives = 174/237 (73.42%), Query Frame = 1
Query:    4 FKLSDTVDDFSDHHY-NRMGFLGEEKPPKNWAKKIQEEWKILERNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLGAMHFSHHAHDILVACEAYMEGAVVGHVNIKNGN 711
            F+  D V+D SDHH+ +    L + +  K+W KK+Q+EW  LE NLP+TI+VRVCE RM+LLRA ++G  GTPYHDGLF FD + PP YP+EPP V+Y+SGG+RLNPNLY+ G+VCLSLL TW+G  TE+W+   S++LQ+L+S QAL+LN KP+FNE G++K     EGEK S SYN++AF+ + K+M+  LRKPPKHFE L   HF+H A  +L AC+AYMEG  VG      GN
Sbjct:  633 FRQFDMVNDCSDHHFLSSDKGLAQSQVTKSWVKKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQALVLNEKPYFNEAGYDKQLGRAEGEKNSVSYNENAFLITCKSMISMLRKPPKHFEMLVKDHFTHRAQHVLAACKAYMEGVPVGSSANLQGN 869          
BLAST of EY662739 vs. ExPASy Swiss-Prot
Match: UBC23_ARATH (Probable ubiquitin carrier protein E2 23 OS=Arabidopsis thaliana GN=UBC23 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.876e-70
Identity = 125/228 (54.82%), Postives = 162/228 (71.05%), Query Frame = 1
Query:    4 FKLSDTVDDFSDHHYNRMGFLGEEKPPKNWAKKIQEEWKILERNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGGLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLGAMHFSHHAHDILVACEAYMEGAVVG 687
            F+  D   D  DHH+  +G  G++   + W KK+ ++WKIL+ NLPD IFVR  E RM+LLRAV++G  GTPY DGLF FD   P  YP+ PPS YY+SGG RLNPNLY+ GKVCLSLL TWTG+  E+WD   S++LQVLVS+Q L+LN+KP+FNE G++K     EGEK S  YN++ F+ + KTMMY +RKPPK FE+L   HF    + IL AC+AYM+G ++G
Sbjct:  824 FRRFDISQDPLDHHF--LGVDGQKTKERQWFKKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQVGTAEGEKNSLGYNENTFLLNCKTMMYLMRKPPKDFEELIKDHFRKRGYYILKACDAYMKGYLIG 1049          
BLAST of EY662739 vs. ExPASy Swiss-Prot
Match: UBE2O_MOUSE (Ubiquitin-conjugating enzyme E2 O OS=Mus musculus GN=Ube2o PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.952e-41
Identity = 94/216 (43.52%), Postives = 134/216 (62.04%), Query Frame = 1
Query:   34 SDHHYNRMGFLGEEKPP--KNWAKKIQEEWKILERNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSG-GLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLGAMHFSHHAHDILVACEAYME 672
            S+H + ++ F    +PP  K +   +++E  +L  +LPD I V+  E RM+L  A++ GP+ TPY DGL++FD   P  YP  PP   Y S    RLNPNLYD GKVC+SLLGTW GK TE W  +KS++LQVL+SIQ LIL  +P++NE GF+      EG + SR YN+ A I  +++M   +R+PP+ FE     HFS     ++   E+++E
Sbjct:  934 SNHSFKKIEF----QPPEAKKFFSTVRKEMALLATSLPDGIMVKTFEDRMDLFSALIKGPTRTPYEDGLYLFDIQLPNIYPAVPPHFCYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWT-SKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHFSVGGWRLVNRIESWLE 1144          
BLAST of EY662739 vs. ExPASy Swiss-Prot
Match: UBE2O_HUMAN (Ubiquitin-conjugating enzyme E2 O OS=Homo sapiens GN=UBE2O PE=1 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.549e-40
Identity = 93/216 (43.06%), Postives = 134/216 (62.04%), Query Frame = 1
Query:   34 SDHHYNRMGFLGEEKPP--KNWAKKIQEEWKILERNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSG-GLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLKTMMYTLRKPPKHFEDLGAMHFSHHAHDILVACEAYME 672
            S+H + ++ F    +PP  K +   +++E  +L  +LP+ I V+  E RM+L  A++ GP+ TPY DGL++FD   P  YP  PP   Y S    RLNPNLYD GKVC+SLLGTW GK TE W  +KS++LQVL+SIQ LIL  +P++NE GF+      EG + SR YN+ A I  +++M   +R+PP+ FE     HFS     ++   E+++E
Sbjct:  937 SNHSFKKIEF----QPPEAKKFFSTVRKEMALLATSLPEGIMVKTFEDRMDLFSALIKGPTRTPYEDGLYLFDIQLPNIYPAVPPHFCYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWT-SKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHFSTGGWRLVNRIESWLE 1147          
BLAST of EY662739 vs. ExPASy Swiss-Prot
Match: BIRC6_HUMAN (Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.039e-36
Identity = 80/200 (40.00%), Postives = 124/200 (62.00%), Query Frame = 1
Query:   94 AKKIQEEWKILERNLP----DTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGG---LRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLK-TMMYTLRKPPKHFEDLGAMHFSHHAHDILVACEAYM 669
            A+++ +E   L  +LP     ++FVR  E R+++++ ++ GP+ TPY +G F FD  FP  YP+ PP V   + G   +R NPNLY+ GKVCLS+L TW G+  E W+   S+ LQVLVS+Q+LIL A+P+FNEPG+E+S   P G + SR Y+ +    ++K  M+  +R P   F+++   HF     +I+  CE ++
Sbjct: 4547 ARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAMLEQIRNPSPCFKEVIHKHFYLKRVEIMAQCEEWI 4746          
BLAST of EY662739 vs. ExPASy Swiss-Prot
Match: UBC3_MIMIV (Probable ubiquitin-conjugating enzyme E2 R521 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R521 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.519e-31
Identity = 77/206 (37.38%), Postives = 110/206 (53.40%), Query Frame = 1
Query:   85 KNWAKKIQEEWKILERNLP----DTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYS---GGLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYNDDAFIYSLK-TMMYTLRKPPKHFEDLGAMHFSHHAHDILVACEAYMEGA 678
            K+  K I  E     +NLP     +I+ R     +     ++ GP  +PY  G F F    P +YPN  P V   +   G +R NPNLY  GKVCLS+LGTW G++ E W    S+MLQV++SIQ+L+L ++P+FNEPG+E S    +G K+S  YN       +K  M+  ++ P   FE +   HFS  A  I   C+ ++  A
Sbjct: 1212 KDALKAISRELLSHSKNLPVEYGSSIYYRYSPENIRYHEFIITGPEDSPYDSGCFHFRMYNPSAYPNTSPFVSMTTTGHGSVRFNPNLYADGKVCLSILGTWRGQAGESWIPGVSSMLQVMISIQSLVLISEPYFNEPGYESSRGTDKGNKLSTEYNQKVRFNCMKWAMIDVIKNPVPGFESMIKKHFSIKAPHIKQVCQTWINEA 1417          
BLAST of EY662739 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.245e-22
Identity = 59/150 (39.33%), Postives = 86/150 (57.33%), Query Frame = 1
Query:    7 KLSDTVDDFSDHHYNRMGFLGEEKPPKNWAKKIQEEWKILERNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYY---SGGLRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALI 447
            K +  ++ FS H  +R          K  AK++      L  N  ++I+V   E R+++++ ++ GP  TPY +GLF FD  FP  YP  PP   +    SG +R NPNLY+ GK+CLS+LGTW G+  E W+   S ++QVLVSIQ +I
Sbjct:  395 KEAKNINPFSPHLRDRT---------KRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCS-LMQVLVSIQEVI 534          
BLAST of EY662739 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENTR (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropicalis GN=ube2z PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.842e-18
Identity = 58/158 (36.71%), Postives = 84/158 (53.16%), Query Frame = 1
Query:   73 EKPPKNWAKKIQEEWKILERNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPSVYYYSGG---LRLNPNLYDCGKVCLSLLGTWTGKSTEMWDKNKSTMLQVLVSIQALILNAKPFFNEPGFEKSYVGPEGEKMSRSYND 537
            E+       +I+ +   + +  P  +FV      M  + A++ GP  TPY  G F+F    PP YP  PP V   + G   +R NPN Y  GKVCLS+LGTWTG +   W   +S +  VL+SIQ+L +   P+ NEPGFE+     +    S++YN+
Sbjct:   53 ERASNQCVLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPA---WSPAQS-LSSVLISIQSL-MTENPYHNEPGFEQERHSGD----SKNYNE 201          
The following BLAST results are available for this feature:
BLAST of EY662739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
UBC25_ARATH6.216e-8260.00Probable ubiquitin carrier protein E2 25 OS=Arabid... [more]
UBC26_ARATH4.029e-8156.52Probable ubiquitin carrier protein E2 26 OS=Arabid... [more]
UBC24_ARATH1.752e-7656.12Probable ubiquitin-conjugating enzyme E2 24 OS=Ara... [more]
UBC23_ARATH1.876e-7054.82Probable ubiquitin carrier protein E2 23 OS=Arabid... [more]
UBE2O_MOUSE6.952e-4143.52Ubiquitin-conjugating enzyme E2 O OS=Mus musculus ... [more]
UBE2O_HUMAN1.549e-4043.06Ubiquitin-conjugating enzyme E2 O OS=Homo sapiens ... [more]
BIRC6_HUMAN1.039e-3640.00Baculoviral IAP repeat-containing protein 6 OS=Hom... [more]
UBC3_MIMIV8.519e-3137.38Probable ubiquitin-conjugating enzyme E2 R521 OS=A... [more]
UBC17_CAEEL3.245e-2239.33Probable ubiquitin-conjugating enzyme protein 17 O... [more]
UBE2Z_XENTR2.842e-1836.71Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-047-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662739 ID=EY662739; Name=EY662739; organism=Citrus sinensis; type=EST; length=901bp
GGCTTTAAGTTGTCTGATACTGTGGATGATTTTTCTGACCATCACTACAA
CCGGATGGGCTTTCTTGGGGAGGAGAAGCCACCAAAGAACTGGGCCAAGA
AAATTCAGGAGGAATGGAAAATTCTGGAAAGGAACTTACCTGATACAATA
TTTGTTAGAGTTTGTGAAGCAAGGATGGAACTTTTAAGGGCCGTCATGAT
TGGACCCTCTGGTACACCCTATCATGATGGCCTTTTTGTCTTTGATTGCA
TCTTCCCACCTAGCTACCCCAATGAACCACCGAGTGTTTATTACTATTCA
GGGGGCCTCCGATTAAATCCTAATTTGTATGATTGTGGAAAAGTCTGCCT
CAGCCTTTTGGGTACCTGGACCGGTAAATCAACTGAGATGTGGGATAAAA
ATAAGTCTACCATGCTGCAGGTTTTGGTTTCCATACAAGCTTTAATTCTG
AATGCAAAACCGTTCTTTAATGAGCCTGGGTTTGAAAAGTCGTATGTCGG
GCCTGAAGGGGAGAAGATGTCCAGAAGTTACAATGACGATGCATTTATCT
ACTCGTTGAAGACAATGATGTATACACTAAGAAAACCACCAAAGCACTTT
GAAGACTTGGGTGCCATGCATTTTTCGCACCATGCTCATGATATTCTGGT
AGCTTGTGAAGCTTATATGGAGGGTGCTGTTGTAGGGCACGTCAACATTA
AAAACGGGAACCCGGGAGTTGATCTAGTCAAGGGGAGCACCTCAAAGGAG
TTAAAGACAAATTAGGCAATGGATGAAAATCTCCGCATTAACTTCACCAG
GAATGAATCAACAGGTTGGGAAACGTTTCTGCCTTCAACCTGATAACATC
TGCATAAAAAAAAACTCCCAACATATGGGGCAGTTGACCCAAACTTTGGT
T
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