EY662711

Overview
NameEY662711
Unique NameEY662711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7777 contig Csv1_Contig7777:1..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662711 vs. ExPASy Swiss-Prot
Match: AB7I_ARATH (Protein ABCI7, chloroplastic OS=Arabidopsis thaliana GN=ABCI7 PE=1 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 3.791e-100
Identity = 176/235 (74.89%), Postives = 205/235 (87.23%), Query Frame = 3
Query:   30 IEEFVGKEGNDCYWANSVLDVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLVLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 734
            +EEFVGK+    YW N VL+VV+ K  K++HSYLQ +S+ +AHIKWT VRQE  S YELVEVSTGGKL RHNVHVQQLGPDT TEL++FH+ V++QT DLHS+++LDHPRG  RQLHKCIVAHS GQAVFDGNV+VNR+AQQT+AGQLTRSLLL+PRATVN+KPNLQIIADDVKCSHGAAISDLEE QLFYFQARGIDLETAR+AL+ SFG+EVIE+FP   IR+Q  +HVK L+
Sbjct:  241 VEEFVGKDEEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYELVEVSTGGKLGRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSGQAVFDGNVRVNRFAQQTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEEDQLFYFQARGIDLETARRALISSFGSEVIEKFPNREIRDQARNHVKGLL 475          
BLAST of EY662711 vs. ExPASy Swiss-Prot
Match: Y076_SYNY3 (UPF0051 protein slr0076 OS=Synechocystis sp. (strain PCC 6803) GN=slr0076 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.262e-43
Identity = 91/215 (42.33%), Postives = 133/215 (61.86%), Query Frame = 3
Query:   66 YWANSVLDVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLVLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 710
            Y+ N V ++ +G+  +V H   Q  S ++ HI  TA+ Q   S Y L++V+ G KLSRHN+ + Q    T+TE  +  +L   Q  D HS + L+HP G   QLHKCIV     QAVF G V V + AQ T+A QL R+L+L  +A +N KP LQI AD+VKCSHGA IS LE  ++FY ++RG++   AR  L+ +F  E++++ P  S++ ++
Sbjct:  231 YFNNIVSEIYLGENAQVTHIRNQRDSGDSFHIATTAIAQGKQSRYRLIDVNLGAKLSRHNLQMTQQEEATKTEFLALTILAGRQVSDTHSTIALNHPHGATNQLHKCIV-DEYAQAVFSGKVLVPQAAQLTNAQQLNRNLVLSSKARINTKPELQITADNVKCSHGATISQLEADEVFYLRSRGLNDYDARHLLIDAFAGEILDQIPLASLQGRL 444          
BLAST of EY662711 vs. ExPASy Swiss-Prot
Match: SUFD_ECOLI (FeS cluster assembly protein sufD OS=Escherichia coli (strain K12) GN=sufD PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26
Identity = 62/169 (36.69%), Postives = 106/169 (62.72%), Query Frame = 3
Query:  222 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLVLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 722
            GG + RHN   Q  G ++   ++S  + V ++  D  +R  L+H +G+C  RQLHK IV+   G+AVF+G + V ++A +TD      +LL+   A V+ KP L+I ADDVKCSHGA +  +++ Q+FY ++RGI+ + A++ ++++F AE+ E      ++ QV++ +
Sbjct:  249 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414          
BLAST of EY662711 vs. ExPASy Swiss-Prot
Match: Y594_MYCLE (UPF0051 protein ML0594 OS=Mycobacterium leprae GN=ML0594 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16
Identity = 55/189 (29.10%), Postives = 100/189 (52.91%), Query Frame = 3
Query:  207 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLVLDHPRGYCRQ--LHKC------IVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD-VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 746
            + V+ GG++ R + +V+  GP  + EL   +   +D  Q L SRL++DH    C+   L+K       + +      V+ G+V ++  A  TD  ++ R+L+L      +  PNL+I  D+ V   H +A    ++ QLFY ++RGI  E AR+ LV  F  E+I +   P +R ++++ +++ +  T+
Sbjct:  200 ITVTLGGEVVRVSANVRFSGPGGDAELLGLYF--ADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPVSSRPDAHTVWVGDVLIHPEATGTDTFEVNRNLVLTNGVRADSVPNLEIETDEIVGAGHASATGRFDDEQLFYLRSRGIGEEQARRLLVRGFFGEIISKIAVPQVRERLIAAIEHELTITE 386          
BLAST of EY662711 vs. ExPASy Swiss-Prot
Match: Y1462_MYCTU (UPF0051 protein Rv1462/MT1509 OS=Mycobacterium tuberculosis GN=Rv1462 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.427e-14
Identity = 61/230 (26.52%), Postives = 111/230 (48.26%), Query Frame = 3
Query:   84 LDVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLVLDHPRGYCRQ--LHKCIV----AHSLGQA--VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD-VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 746
            ++ V+    ++   ++ + + N  H+     R    +    V V  GG + R +  V+  G   + EL   +   +D  Q L SRL++DH    C+   L+K  +    A SL  A  V+ G+V +   A  TD  ++ R+L+L   A  +  PNL+I   + V   H +A    ++ QLFY ++RGI    AR+ +V  F  E+I +   P +R ++ + +++ +  T+
Sbjct:  162 VEFVVDDAARLTAVWIADWADNTVHLSAHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYF--ADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARRLVVRGFFGEIIAKIAVPEVRERLTAAIEHELEITE 389          
BLAST of EY662711 vs. ExPASy Swiss-Prot
Match: Y1497_MYCBO (UPF0051 protein Mb1497 OS=Mycobacterium bovis GN=Mb1497 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13
Identity = 57/189 (30.16%), Postives = 96/189 (50.79%), Query Frame = 3
Query:  207 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLVLDHPRGYCRQ--LHKCIV----AHSLGQA--VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD-VKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 746
            V V  GG + R +  V+  G   + EL   +   +D  Q L SRL++DH    C+   L+K  +    A SL  A  V+ G+V +   A  TD  ++ R+L+L   A  +  PNL+I   + V   H +A    ++ QLFY ++RGI    AR+ +V  F  E+I +   P +R ++ + +++ +  T+
Sbjct:  203 VTVMLGGDVVRMSAGVRFCGAGGDAELLGLYF--ADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARRLVVRGFFGEIIAKIAVPEVRERLTAAIEHELEITE 389          
BLAST of EY662711 vs. ExPASy Swiss-Prot
Match: Y1496_MYCBO (UPF0051 protein Mb1496 OS=Mycobacterium bovis GN=Mb1496 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13
Identity = 51/204 (25.00%), Postives = 98/204 (48.04%), Query Frame = 3
Query:   75 NSVLDVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLVLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 686
            ++V+++++    +VR++ +QN S N  ++     R E  +  E ++ + G K++     V   G   + E+ S      DQ QD  ++++   P      + K  VA   G+  + G V+VN+ A  + +     +LL++  +  +  P + I  DDV   H A +S + E+QLFY  +RG+  + A   +V  F   + +  P
Sbjct:  624 SAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKS-VARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELP 826          
BLAST of EY662711 vs. ExPASy Swiss-Prot
Match: Y1461_MYCTU (UPF0051 protein Rv1461/MT1508 OS=Mycobacterium tuberculosis GN=Rv1461 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13
Identity = 51/204 (25.00%), Postives = 98/204 (48.04%), Query Frame = 3
Query:   75 NSVLDVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLVLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 686
            ++V+++++    +VR++ +QN S N  ++     R E  +  E ++ + G K++     V   G   + E+ S      DQ QD  ++++   P      + K  VA   G+  + G V+VN+ A  + +     +LL++  +  +  P + I  DDV   H A +S + E+QLFY  +RG+  + A   +V  F   + +  P
Sbjct:  624 SAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKS-VARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELP 826          
BLAST of EY662711 vs. ExPASy Swiss-Prot
Match: Y593_MYCLE (UPF0051 protein ML0593 OS=Mycobacterium leprae GN=ML0593 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11
Identity = 50/204 (24.51%), Postives = 96/204 (47.06%), Query Frame = 3
Query:   75 NSVLDVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLVLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 686
            ++V+++++    +VR++ +QN S N  ++     R ET +  E ++ + G K++     V   G   + E+ S       Q QD  +++ L         +    VA   G+  + G V+VN+ A  + +     +LL++  +  +  P + I  DDV   H A +S + E+QLFY  +RG+  + A   +V  F   + +  P
Sbjct:  647 SAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARVETGATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKM-LHLASNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLAEDEAMAMVVRGFVEPIAKELP 849          
BLAST of EY662711 vs. ExPASy Swiss-Prot
Match: SUFD_BACSU (FeS cluster assembly protein sufD OS=Bacillus subtilis GN=sufD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11
Identity = 53/238 (22.27%), Postives = 110/238 (46.22%), Query Frame = 3
Query:   27 YIEEFVGKEGNDCYWANSVLDVVIGKGGKVRHSYLQNQSLNAA---HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLVL--DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 725
            Y+E ++          N + +V+ G    V +  + N S       + +  A  +++   + L  ++ G  +S +  ++   G  T  +  +  +   +QT++  ++++       GY   + K  V      ++F+G  K+   A + +A Q +R L+L  +A  +  P L I  DDV   H A++  ++  QL+Y  +RGI  E A + +++ F A V+   P   ++ Q+VS ++
Sbjct:  201 YVENYISTVNPKDAVFNIISEVITGDNASVTYGAVDNLSSGVTTYVNRRGAARGRDSKIEWALGLMNDGDTISENTTNLY--GDGTYGDTKTVVVGRGEQTENFTTQIIHFGKASEGY---ILKHGVMKDSASSIFNGIGKIEHGASKANAEQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERLVIYGFLAPVVNELPIEGVKKQLVSVIE 433          
The following BLAST results are available for this feature:
BLAST of EY662711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
AB7I_ARATH3.791e-10074.89Protein ABCI7, chloroplastic OS=Arabidopsis thalia... [more]
Y076_SYNY33.262e-4342.33UPF0051 protein slr0076 OS=Synechocystis sp. (stra... [more]
SUFD_ECOLI1.626e-2636.69FeS cluster assembly protein sufD OS=Escherichia c... [more]
Y594_MYCLE5.798e-1629.10UPF0051 protein ML0594 OS=Mycobacterium leprae GN=... [more]
Y1462_MYCTU5.427e-1426.52UPF0051 protein Rv1462/MT1509 OS=Mycobacterium tub... [more]
Y1497_MYCBO1.579e-1330.16UPF0051 protein Mb1497 OS=Mycobacterium bovis GN=M... [more]
Y1496_MYCBO7.836e-1325.00UPF0051 protein Mb1496 OS=Mycobacterium bovis GN=M... [more]
Y1461_MYCTU7.836e-1325.00UPF0051 protein Rv1461/MT1508 OS=Mycobacterium tub... [more]
Y593_MYCLE1.478e-1124.51UPF0051 protein ML0593 OS=Mycobacterium leprae GN=... [more]
SUFD_BACSU2.521e-1122.27FeS cluster assembly protein sufD OS=Bacillus subt... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-047-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662711 ID=EY662711; Name=EY662711; organism=Citrus sinensis; type=EST; length=892bp
TTCGTCGACCCACGCGTCCGGGTCGGTATATCGAAGAGTTCGTTGGCAAA
GAGGGTAATGACTGTTATTGGGCTAATTCAGTTTTGGACGTGGTGATTGG
AAAAGGGGGAAAGGTTAGGCATTCTTATTTGCAGAATCAGTCTTTGAATG
CCGCTCATATCAAGTGGACTGCTGTGAGGCAGGAAACAGCTAGTGGTTAT
GAGCTTGTAGAGGTAAGTACTGGTGGAAAATTGAGCAGGCACAATGTCCA
TGTTCAACAATTAGGCCCTGATACAGAGACAGAGTTATCTTCATTTCATT
TGTTGGTCTCTGATCAAACACAAGATCTTCATAGTAGGCTAGTGTTGGAC
CATCCACGAGGCTATTGTCGACAGCTTCACAAGTGTATTGTGGCTCATTC
GCTAGGACAAGCTGTTTTTGATGGGAACGTAAAGGTTAACAGATATGCAC
AGCAAACAGATGCTGGACAACTAACAAGAAGTCTCCTCCTTGAACCCCGT
GCAACTGTAAATGTCAAACCCAATCTTCAAATTATTGCCGACGATGTGAA
GTGCTCACACGGAGCTGCAATAAGTGATCTAGAAGAAAGCCAACTCTTTT
ACTTTCAGGCGCGGGGCATTGACTTAGAGACAGCAAGGAAAGCTCTTGTT
TTTTCATTTGGAGCTGAGGTGATCGAACGGTTTCCTTACCCTTCTATTCG
AAACCAAGTCGTGAGTCATGTCAAAAATTTGATGGGAACTACTGATGTTA
GTTTCTCCTAGTCAGGGTTTATAGATGGTGTGCATATTCTGTTTTTTGTG
TGCCCTACCCTTATATTATACCATCAATTTTATTTTTTTTTATATCAGAC
AAAAATAATATTGTTTAAAAAGAAAAAAAAAAAAAAGGGCGG
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