EY662252

Overview
NameEY662252
Unique NameEY662252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662252 vs. ExPASy Swiss-Prot
Match: Y5957_ARATH (Uncharacterized protein At5g39570 OS=Arabidopsis thaliana GN=At5g39570 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.388e-20
Identity = 77/194 (39.69%), Postives = 94/194 (48.45%), Query Frame = 2
Query:   80 RPLPQPAYGIQPGMGRXXXXXXXXXXXXXXXXXAKRPDSQEYGSGYG--------KRPESEEYGSGYGRKPDSEV-YGSG--------YGRRPESG-ESGFGGRTESEYGGS-AYGRKPEYESGYGQKPEYESGFGGKPGY-ESGYGSKPEFESGYGRKPEY------------ESGYGSRPEFESGYGXKPEY 565
            RP P+PA+    G G                   ++P+S EYGSGYG        +RPE + YGSGYG + ++E  YGSG        YGRRPESG  SG+GGR+ESEY    +YGR  E E GY +KP Y      + GY +  YG   E E GY RKP Y            +  YG   E E G   KP Y
Sbjct:   84 RPKPRPAFRPDSGGGGHVQGERPNPGYGSESGYGRKPES-EYGSGYGGQTEVEYGRRPE-QSYGSGYGGRTETESEYGSGGGGRTEVEYGRRPESGLGSGYGGRSESEYERKPSYGRSEEQEEGY-RKPSYGRSEEQEEGYRKPSYGRSEEQEEGY-RKPSYGRSEEEQEEGYRKPSYGRSEEQEEGSYRKPSY 273          

HSP 2 Score: 77.411 bits (189), Expect = 1.269e-13
Identity = 61/135 (45.19%), Postives = 71/135 (52.59%), Query Frame = 2
Query:  209 SGYGKRPESEEYGSGYGR-------KPDSEVYGSGYGRRPESG---ESGFGGRTESEYGGSAYGRKPEYESGYGQKPE--YESGFGGKPGYESGYGS--KPEFESGYGRKPE--YESGYGSRPEFESGYGXKPEY 565
            S YG    + EY S Y R       +PDS   G   G RP  G   ESG+G + ESEYG S YG + E E  YG++PE  Y SG+GG+   ES YGS      E  YGR+PE    SGYG R E E  Y  KP Y
Sbjct:   68 SAYGDEALNTEYSS-YSRPKPRPAFRPDSGGGGHVQGERPNPGYGSESGYGRKPESEYG-SGYGGQTEVE--YGRRPEQSYGSGYGGRTETESEYGSGGGGRTEVEYGRRPESGLGSGYGGRSESE--YERKPSY 196          
BLAST of EY662252 vs. ExPASy Swiss-Prot
Match: IF2_CLOPH (Translation initiation factor IF-2 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=infB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 40/125 (32.00%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  182 KRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVYGSGYGRRPESGESGFGGRTESEYGGSAYG-RKPEYESGYGQKPEYESGFGGK-PGYESGYGSKPEFESGYGRKPEYESGYGSRPEFESGYG 550
            +RP  Q     YG RP+ +  GS   R+P  +     YG RP+ G+  +G R     G  +YG R+P+ +  YG +P+ +  FG + P  + GYG +P+ +  YG +P+ + GY  R + +  +G
Sbjct:  333 RRPQGQ---GSYGDRPQGQ--GSYGDRRPQGQ---GSYGDRPQ-GQGNYGDRRPG--GQGSYGDRRPQGQGSYGDRPQGQGNFGDRRPQGQGGYGGRPQGQGSYGGRPQGQGGYAGRSQGQGSFG 446          
The following BLAST results are available for this feature:
BLAST of EY662252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y5957_ARATH2.388e-2039.69Uncharacterized protein At5g39570 OS=Arabidopsis t... [more]
IF2_CLOPH2.027e-1132.00Translation initiation factor IF-2 OS=Clostridium ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662252 ID=EY662252; Name=EY662252; organism=Citrus sinensis; type=EST; length=918bp
TCGTACAACGAGCGCGTCCGGACCAAAGCCTTGCTCCGGTTTCGTACCCG
GGTCAGGGGGTGGGTCGGGTTATGGAGGAAGGCCTTTGCCCCAGCCGGCG
TATGGGATTCAGCCTGGAATGGGAAGGCCCGAACCTTATGGGTCGGGGAG
GTCTGAATCTGAATATGGTTCTGGGTATGCGAAGAGGCCTGATTCGCAGG
AATATGGATCTGGGTACGGAAAGAGACCCGAGTCGGAGGAATATGGATCT
GGGTACGGCAGGAAACCTGATTCCGAGGTGTATGGCTCTGGATATGGGCG
GAGACCCGAGTCGGGTGAATCCGGATTTGGTGGTAGGACTGAGTCCGAGT
ATGGAGGATCAGCGTATGGACGAAAACCCGAATATGAGTCCGGTTATGGC
CAGAAACCGGAATATGAATCTGGCTTTGGTGGAAAACCAGGGTACGAGTC
TGGATATGGAAGCAAACCCGAATTTGAATCCGGATATGGTAGGAAACCCG
AGTACGAGTCTGGGTACGGCAGCAGGCCGGAATTTGAATCCGGCTATGGT
NGGAAACCCGAGTATGAGTCCGGCTTCGGGAGTANGCTTGATGATGGGTC
CGGCTNTGGGGGTAAGCCCATGAATCTGGCTATGGGCGNTAACCCATTTT
TGGTCCGGGTTTGGGAGCCCNCCGGGGGTTGGATCCTGGGGATTGGCGGT
TGCCCGCGGTTTGATTCCCGGTCTGGTTGCCTGCCGGGGTTCGGGTCCGG
GGTTGGCGCGGAACCTGGTTCTTGTTTCCGTGGGGGGTCCGGGGTGGTGT
CGGGCTTTGGTCTTTTGGGGGGGGTCCCGTCTGGGGAGGCCTGTGGCCTA
GAAGGGGTTTTGAGCCCCGGCTCTCTTTTTTTGGNACAACGGGGGAAGCG
TTGGTTTATGCGGAAAAC
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