EY662247
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY662247 vs. ExPASy Swiss-Prot
Match: CRS2A_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 3.981e-95 Identity = 172/246 (69.92%), Postives = 198/246 (80.49%), Query Frame = 1 Query: 145 MLYALSAPKTCISCPRGPPFPQKRQVSTRLC-VHASLP-DDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALGQGVEAVKTLVLHGFDQNISRFNMGEKYKYHAV 876 M A S+P T P+ F Q + S R + ASLP DN K EYTPWLIVGLGNPG+KY+GTRHN+GFEMIDHIA+A I+MNTIQSKAL+GIGS+GEVPILL KPQ YMNFSGESVGPLAA+YQ+PLRHIL+IYD+M L NGVLRLQPKGGH HNGLK+V HL+GCR +PRL IGIGNPPG MDMKA+LLQKFSP+ER+Q+D L QGVE VKTLV GF +ISRFN+G+KYK+H V Sbjct: 1 MFCASSSPITSPLYPKAYKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246
BLAST of EY662247 vs. ExPASy Swiss-Prot
Match: CRS2B_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 5.036e-90 Identity = 164/224 (73.21%), Postives = 190/224 (84.82%), Query Frame = 1 Query: 205 PQKRQVSTRLCVHASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALGQGVEAVKTLVLHGFDQNISRFNMGEKYKYHAV 876 P R+ R+C S +D+ FKVEYTPWLIVGLGNPG KYHGTRHNVGFEMID +A+ + + MNTIQSKALIGIG+I +VPILLAKPQ YMNFSGESVG LA+HY+VPLRHIL+IYDEM+L NGVLRLQPKGG G+HNG+KSVM HLDG R FPRL IGIG PPG MDMKA+LLQKFSP+E++QI+ AL QG EAVKTLVL+GF+Q ISRFN+ +KYK+H V Sbjct: 18 PVFRKQRFRVCSSTSGGEDDR-FKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240
BLAST of EY662247 vs. ExPASy Swiss-Prot
Match: CRS2_MAIZE (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 2.860e-85 Identity = 165/263 (62.74%), Postives = 196/263 (74.52%), Query Frame = 1 Query: 88 ALPRLCSFIFAS*KPKNRSMLYALSAPKTCISCPRGPPFPQKRQVSTRLCVHASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALGQGVEAVKTLVLHGFDQNISRFNMGEKYKYHAV 876 A+P S A P R +L+AP I PR PF V +S+PD G VEYTPWLI GLGNPG KY+GTRHNVGFEM+D IA + I MNTIQSK+L+GIGSIGEVP+L+ KPQ+YMN+SGE++GPLAA+YQVPLRHIL+IYD+ SL NGVLRLQ KGGHG HNGL++V+ HLDG REFPRL IGIG+PPGKMD +A+LLQKFS ER QID AL QGV+AV+TLVL GF + RFN+ +KYK+H V Sbjct: 7 AIPSTSSHFSAPFLPSFRMPRKSLTAPLHRIRRPR--PFT----------VVSSVPDPAAG-PVEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256
BLAST of EY662247 vs. ExPASy Swiss-Prot
Match: CRS2_ORYSJ (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0132800 PE=2 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 8.321e-85 Identity = 153/223 (68.61%), Postives = 184/223 (82.51%), Query Frame = 1 Query: 208 QKRQVSTRLCVHASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALGQGVEAVKTLVLHGFDQNISRFNMGEKYKYHAV 876 ++ ++ R+ V AS+PD EYTPWLI GLGNPG KYHGTRHNVGFEM+D IA+ + I MNTIQSK+L+GIGSIGEVP+LL KPQ+Y+N+SGE++GPLAA+YQVPLRHILV+YDEMSL NGVLRLQ KGGHG HNGL++VM LD RE PRL IGIG+PPGKMD +A+LLQKFS ER QID AL QGV+AV+TLVL GF +I RFN+ +KYK+H+V Sbjct: 38 RRTRLRRRIAVVASVPDP-AARPAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259
BLAST of EY662247 vs. ExPASy Swiss-Prot
Match: PTHM_ARATH (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 4.018e-63 Identity = 115/195 (58.97%), Postives = 149/195 (76.41%), Query Frame = 1 Query: 283 YTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALGQGVEAVKTLVLHGFDQNISRFNMGEKYKY 867 + PWL +GLGNPG KY GTRHN+GFEMID A++ I MN + KA++G G + ++P++LAKPQ YMN SGES GPLAA+Y++PL +LV++D+M L GVLRLQ KGGHG HNGLKSVMNH G REF RL IGIG PPG+MD KA+LLQKFS RE++D AL +GV+A+K ++ F ++ FN+ +KYK+ Sbjct: 16 HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKH 210
BLAST of EY662247 vs. ExPASy Swiss-Prot
Match: PTHC_ARATH (Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana GN=At1g18440 PE=2 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 3.520e-59 Identity = 104/186 (55.91%), Postives = 143/186 (76.88%), Query Frame = 1 Query: 289 PWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALGQGVEAVKTLVLHGFDQNISRFN 846 PWLIVGLGNPG KY GTRHNVGFEM+D +A A+ I+MNT+ KAL G G IG +PI+LAKPQ +MN SGESVG + + Y++PL+ +LV+YD++ L G LRL PKGGHG HNG++S+++ L G R+FPRL IGIG PPGKMD ++L++F+ E+E++D G+EA++ L+L GF+++ + N Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVN 279
BLAST of EY662247 vs. ExPASy Swiss-Prot
Match: PTHM_ORYSJ (Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os01g0693900 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.295e-57 Identity = 106/204 (51.96%), Postives = 149/204 (73.04%), Query Frame = 1 Query: 244 ASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALGQGVEAVKTLVLHGFDQNISRFNMGE 855 A+ D G K PWL VGLGNPG Y GTRHNVGFEMID IA+A+ I+++++Q KA++G G IG+ PI+LAKPQ +MN SGESVG L +++++PL +LV+YD++ L LRL PKGGHG HNG++S++NHL R+FPRL IGIG PPGKMD ++L+ F+ E+E++D A +G+EAV+ + L GF+++ + N + Sbjct: 44 AAAAGDGGALK----PWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIINHLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFNKSATYVNTAQ 243
BLAST of EY662247 vs. ExPASy Swiss-Prot
Match: CRS2L_ORYSJ (CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0347800 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.623e-38 Identity = 83/143 (58.04%), Postives = 97/143 (67.83%), Query Frame = 1 Query: 199 PFPQKRQVSTRLCVHASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNG 627 PF KR ST SL + V PWL VGLGNPG KY TRHNVGF+MID AQ+Q I++ KAL G G + VP+LLAKPQ YMN SGESVGPLAA+Y++PL +LV +D+M L GVLRLQPKGG+G HNG Sbjct: 34 PFISKRHASTS---QTSLSSSSSSCSV-INPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
BLAST of EY662247 vs. ExPASy Swiss-Prot
Match: PTH_CLOD6 (Peptidyl-tRNA hydrolase OS=Clostridium difficile (strain 630) GN=pth PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.843e-38 Identity = 74/185 (40.00%), Postives = 122/185 (65.95%), Query Frame = 1 Query: 292 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALGQGVEAVKTLVLHGFDQNISRFN 846 +++VGLGNPG KY TRHNVGF++ID +A+ I++ I+ KALIG G +G +LL KPQ YMN SGE++ + +Y+V L +I+V+YD++ L G +R++ KG G HNG+KS+ L G +FPR+ +G+ P D+ ++L +F E + I+ AL + +A+ +++ D +++++N Sbjct: 2 YVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKPQTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKCL-GSNDFPRVRVGVSKPEAGQDLADFVLSRFRKEESDNINEALEKAADAIDSIIRENIDMSMNKYN 185
BLAST of EY662247 vs. ExPASy Swiss-Prot
Match: PTH_CHLSY (Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pth PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.947e-37 Identity = 78/186 (41.94%), Postives = 118/186 (63.44%), Query Frame = 1 Query: 292 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQV-PLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALGQGVEAVKTLVLHGFDQNISRFN 846 WLIVGLGNPG +Y TRHN+GF +D +A+ + ++ + + G+I ++LAKPQ YMN SG++V L Y++ P R +LVIYD++ L LR++ +G G HNG++S++ L G EFPRL +GIG PPGKMD Y+L +F+P E + LG+ +AV+ ++ G ++R+N Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKPQTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVAQL-GTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLTTAMNRYN 186 The following BLAST results are available for this feature:
BLAST of EY662247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY662247 ID=EY662247; Name=EY662247; organism=Citrus sinensis; type=EST; length=939bpback to top |