EY744203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 1.555e-105 Identity = 205/274 (74.82%), Postives = 222/274 (81.02%), Query Frame = 3 Query: 21 MSTAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVFF 842 M+T M EDSN EDDQL +M+T+DIIRASRLLDNEIR++KEELQRTNLELDS+KEK+KENQEKIKLNKQLPYLVGNIVEILEMNPE+EAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDY+DIGGLEKQI EL+EAIVLPMTH+ERF KLGVRPPKGVL G+ Q ATF + P +MF+ G L R K K PC+ F Sbjct: 1 MATPMAEDSNFEDDQLHAMSTEDIIRASRLLDNEIRIIKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEEEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQ-TNATFLKL-AGPQLVQMFIGDGAK---LVRDAFQLAKEK-SPCIIF 268
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 1.456e-103 Identity = 204/275 (74.18%), Postives = 221/275 (80.36%), Query Frame = 3 Query: 21 MSTAMVED-SNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVFF 842 M+T MVED S+ E+DQL+SM+T+DI RA+RLLDNEIR+LKE+ QRTNLE DSYKEK+KENQEKIKLNKQLPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI EL+EAIVLPMTHKERF KLGVRPPKGVL G+ Q ATF + P +MF+ G L R K K PC+ F Sbjct: 1 MATPMVEDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQ-TNATFLKL-AGPQLVQMFIGDGAK---LVRDAFQLAKEK-APCIIF 269
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 1.456e-103 Identity = 203/275 (73.82%), Postives = 222/275 (80.73%), Query Frame = 3 Query: 21 MSTAMVED-SNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVFF 842 M+T MVED S+ E+DQL+SM+T+DI+RA+RLL+NEIR+LKE+ QRTNLE DSYKEK+KENQEKIKLNKQLPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI EL+EAIVLPMTHKERF KLGVRPPKGVL G+ Q ATF + P +MF+ G L R K K PC+ F Sbjct: 1 MATPMVEDTSSFEEDQLASMSTEDIVRATRLLENEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQ-TNATFLKL-AGPQLVQMFIGDGAK---LVRDAFQLAKEK-APCIIF 269
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 372.474 bits (955), Expect = 2.102e-102 Identity = 200/274 (72.99%), Postives = 223/274 (81.39%), Query Frame = 3 Query: 21 MSTAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVFF 842 M+TAM ED++ E DQL+SMTTDDI RASRLL NEIR+LKEE QRTNL+L+S KEK+KENQEKIKLNKQLPYLVGNIVEILEM+PED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI EL+EAIVLPMTHKE+F KLG+RPPKGVL G+ Q ATF + P +MF+ G+ +L+ FL ++ PC+ F Sbjct: 1 MATAMAEDTSFEGDQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQ-TNATFLKL-AGPQLVQMFI--GDGAKLVRDAFLLAKEKS--PCIIF 268
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 369.392 bits (947), Expect = 1.780e-101 Identity = 198/273 (72.53%), Postives = 220/273 (80.59%), Query Frame = 3 Query: 24 STAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVFF 842 + AM D + +DDQL+SM+T+DI+RA+RLLDNE RVLK+ELQRTNLE++SYKEK+KENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV+GLVDP+KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI EL+EAIVLPMTHK+RF KLG+RPPKGVL G+ Q ATF + P +MF+ G L R K K PC+ F Sbjct: 9 AAAMAVD-DADDDQLASMSTEDIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQ-TNATFLKL-AGPQLVQMFIGDGAK---LVRDAFQLAKEK-SPCIIF 274
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 293.508 bits (750), Expect = 1.241e-78 Identity = 152/260 (58.46%), Postives = 193/260 (74.23%), Query Frame = 3 Query: 60 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839 +++ M+T++II+ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+NK LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQI EL+EAIVLPM HKE+F LG++PPKGVL G+ Q KATF + P +MF+ G L R K K P +F Sbjct: 31 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ-TKATFLKL-AGPQLVQMFIGDGAK---LVRDAFALAKEKAPSIIF 284
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.621e-78 Identity = 151/260 (58.08%), Postives = 193/260 (74.23%), Query Frame = 3 Query: 60 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839 +++ M+T++I++ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+NK LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQI EL+EAIVLPM HKE+F LG++PPKGVL G+ Q KATF + P +MF+ G L R K K P +F Sbjct: 31 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ-TKATFLKL-AGPQLVQMFIGDGAK---LVRDAFALAKEKAPSIIF 284
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.765e-78 Identity = 151/260 (58.08%), Postives = 193/260 (74.23%), Query Frame = 3 Query: 60 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839 +++ M+T++II+ +RLLD+EI+++K E+ R EL + ++K+KEN EKIK+NK LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQI EL+EAIVLPM HKE+F LG++PPKGVL G+ Q KATF + P +MF+ G L R K K P +F Sbjct: 15 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ-TKATFLKL-AGPQLVQMFIGDGAK---LVRDAFALAKEKAPSIIF 268
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 3.611e-78 Identity = 150/260 (57.69%), Postives = 193/260 (74.23%), Query Frame = 3 Query: 60 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839 +++ M+T++I++ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+NK LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP++YDSRVKAMEVDE+PTE Y+DIGGL+KQI EL+EAIVLPM HKE+F LG++PPKGVL G+ Q KATF + P +MF+ G L R K K P +F Sbjct: 34 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTDYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ-TKATFLKL-AGPQLVQMFIGDGAK---LVRDAFALAKEKAPSIIF 287
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 4.716e-78 Identity = 151/255 (59.22%), Postives = 191/255 (74.90%), Query Frame = 3 Query: 75 MTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839 M+T++II+ +RLLD+EI+++K E+ R EL + ++K+KEN EKIK+NK LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQI EL+EAIVLPM HKE+F LG++PPKGVL G+ Q KATF + P +MF+ G L R + K K P +F Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ-TKATFLKL-AGPQLVQMFIGDGAK---LVRDAFSLAKEKAPSIIF 249 The following BLAST results are available for this feature:
BLAST of EY744203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744203 ID=EY744203; Name=EY744203; organism=Citrus sinensis; type=EST; length=980bpback to top |