EY661578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661578 vs. ExPASy Swiss-Prot
Match: HTR12_ARATH (Histone H3-like centromeric protein HTR12 OS=Arabidopsis thaliana GN=HTR12 PE=2 SV=3) HSP 1 Score: 174.866 bits (442), Expect = 5.409e-43 Identity = 98/178 (55.06%), Postives = 117/178 (65.73%), Query Frame = 2 Query: 56 MARTKHMARRS-----------IRLQAAAVKATP---------------PTSSPGTSRQRRSEAG-EGTPT-AQRKRQRLRPGTKALREIRRFQKSVDLLIPRMSFIREVRTITYRVAPPDVNRWTPEALIALQEAAEDFLVNLFGDAMLCAIHAKRVTLMKKDFELARRLGGKGQPW 505 MARTKH RS QAA TP PT+SP T +R ++ + P +Q+K R RPGT AL+EIR FQK +LLIP SFIREVR+IT+ +APP +NRWT EAL+ALQEAAED+LV LF D+MLCAIHA+RVTLM+KDFELARRLGGKG+PW Sbjct: 1 MARTKHRVTRSQPRNQTDAAGASSSQAAGPTTTPTRRGGEGGDNTQQTNPTTSPATGTRRGAKRSRQAMPRGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPPQINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRLGGKGRPW 178
BLAST of EY661578 vs. ExPASy Swiss-Prot
Match: CENPA_NEUCR (Histone H3-like centromeric protein cse-4 OS=Neurospora crassa GN=cse-4 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.958e-30 Identity = 69/137 (50.36%), Postives = 93/137 (67.88%), Query Frame = 2 Query: 83 RSIRLQAAAVKATPPTSSPGTSRQRRSEAGEGTPTAQRKRQRLRPGTKALREIRRFQKSVDLLIPRMSFIREVRTITYRVAPPDVN-RWTPEALIALQEAAEDFLVNLFGDAMLCAIHAKRVTLMKKDFELARRLGG 490 +++ +AAAV TP + PG + R S G P Q K++R RPGT AL+EIR +Q++ DLL+ ++ F R VR I + P D RW +A++ALQEAAE FLV+LF D LCAIHAKRVT+M+KD +LARR+ G Sbjct: 12 KAVSKKAAAVP-TPKATPPGRRKSRASSVQPGDPVPQGKKRRYRPGTLALKEIRNYQRTTDLLVAKLPFARLVREIAMQFRPMDEEMRWQSQAILALQEAAEAFLVHLFEDTNLCAIHAKRVTIMQKDIQLARRIRG 147
BLAST of EY661578 vs. ExPASy Swiss-Prot
Match: CENPA_CANAL (Histone H3-like centromeric protein CSE4 OS=Candida albicans GN=CSE4 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.025e-25 Identity = 68/139 (48.92%), Postives = 87/139 (62.59%), Query Frame = 2 Query: 92 RLQAAAVKATPPTSSPGTSRQRRSEAGEGTPTAQRKRQRLRPGTKALREIRRFQKSVDLLIPRMSFIREVRTITYRVAPPDVN-RWTPEALIALQEAAEDFLVNLFGDAMLCAIHAKRVTLMKKDFELARRLGGKGQPW 505 R Q V T +S P + R E P R ++R RPGTKALREIR++QKS DLLI ++ F R VR I+ P RW A++ALQEA+E FL++L D LCAIHAKRVT+M+KD +LARR+ +GQ W Sbjct: 76 RNQPGDVVDTLASSLPRRTTTTRPEVNRTVP---RVKKRYRPGTKALREIRQYQKSTDLLIRKLPFARLVREISLDFVGPSYGLRWQSNAILALQEASESFLIHLLEDTNLCAIHAKRVTIMQKDIQLARRI--RGQSW 209
BLAST of EY661578 vs. ExPASy Swiss-Prot
Match: H33_TETPY (Histone H3.3 OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.137e-23 Identity = 68/146 (46.58%), Postives = 91/146 (62.33%), Query Frame = 2 Query: 56 MARTKHMARRSIRLQAAAVKATPPTSSPGTSRQRRSEAGEGTPTAQRKRQRLRPGTKALREIRRFQKSVDLLIPRMSFIREVRTITYRVAPPDVNRWTPEALIALQEAAEDFLVNLFGDAMLCAIHAKRVTLMKKDFELARRLGGK 493 MARTK AR+S ++A P T R+S G +K + RPGT ALREIR++QK+ DLLI ++ F R VR I + D+ R+ +A++ALQEAAE +LV LF D LCAIHA+RVT+M KD +LARR+ G+ Sbjct: 1 MARTKQTARKSTGVKA-------PRKQLATKAARKSAPVSG---GVKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKN-DI-RFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGE 134
BLAST of EY661578 vs. ExPASy Swiss-Prot
Match: H33_TETTH (Histone H3.3 OS=Tetrahymena thermophila GN=HHT3 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.791e-23 Identity = 68/146 (46.58%), Postives = 90/146 (61.64%), Query Frame = 2 Query: 56 MARTKHMARRSIRLQAAAVKATPPTSSPGTSRQRRSEAGEGTPTAQRKRQRLRPGTKALREIRRFQKSVDLLIPRMSFIREVRTITYRVAPPDVNRWTPEALIALQEAAEDFLVNLFGDAMLCAIHAKRVTLMKKDFELARRLGGK 493 MARTK AR+S ++A P T R+S G +K + RPGT ALREIR++QK+ DLLI ++ F R VR I + D+ R+ +A++ALQEAAE +LV LF D LCAIHA+RVT+M KD LARR+ G+ Sbjct: 1 MARTKQTARKSTGVKA-------PRKQLATKAARKSAPVSG---GVKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKS-DI-RFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDLHLARRIRGE 134
BLAST of EY661578 vs. ExPASy Swiss-Prot
Match: H3_GRIJA (Histone H3 OS=Griffithsia japonica PE=2 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23 Identity = 69/146 (47.26%), Postives = 86/146 (58.90%), Query Frame = 2 Query: 56 MARTKHMARRSIRLQAAAVKATPPTSSPGTSRQRRSEAGEGTPTAQRKRQRLRPGTKALREIRRFQKSVDLLIPRMSFIREVRTITYRVAPPDVNRWTPEALIALQEAAEDFLVNLFGDAMLCAIHAKRVTLMKKDFELARRLGGK 493 MARTK AR+S +A P T R+S G +K R RPGT ALREIRRFQKS +LL+ ++ F R VR I R+ A++ALQEAAE ++V LF D LCAIHAKRVT+M KD +LARR+ G+ Sbjct: 1 MARTKQTARKSTGGKA-------PRKQLATKAARKSAPASG---GVKKPHRFRPGTVALREIRRFQKSTELLVRKLPFQRLVREIAQDFKSD--LRFQSSAVLALQEAAEAYMVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
BLAST of EY661578 vs. ExPASy Swiss-Prot
Match: H3_EUPCR (Histone H3 OS=Euplotes crassus PE=3 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23 Identity = 68/146 (46.58%), Postives = 89/146 (60.96%), Query Frame = 2 Query: 56 MARTKHMARRSIRLQAAAVKATPPTSSPGTSRQRRSEAGEGTPTAQRKRQRLRPGTKALREIRRFQKSVDLLIPRMSFIREVRTITYRVAPPDVNRWTPEALIALQEAAEDFLVNLFGDAMLCAIHAKRVTLMKKDFELARRLGGK 493 MARTK AR+++ +A P G R++ + T +K R RPGT ALREIRR+QKS +LLI ++ F R VR I R+ A++ALQEAAE +LV+LF D LCAIHAKRVT+M KD +LARR+ G+ Sbjct: 1 MARTKQTARKNVGGKA-------PRKHIGQKSARKTAS---TTAGMKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQEFKGD--LRFQSSAVLALQEAAEAYLVSLFEDTNLCAIHAKRVTIMPKDMQLARRIRGE 134
BLAST of EY661578 vs. ExPASy Swiss-Prot
Match: H31_TETTH (Histone H3 OS=Tetrahymena thermophila GN=HHT1 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23 Identity = 68/146 (46.58%), Postives = 87/146 (59.59%), Query Frame = 2 Query: 56 MARTKHMARRSIRLQAAAVKATPPTSSPGTSRQRRSEAGEGTPTAQRKRQRLRPGTKALREIRRFQKSVDLLIPRMSFIREVRTITYRVAPPDVNRWTPEALIALQEAAEDFLVNLFGDAMLCAIHAKRVTLMKKDFELARRLGGK 493 MARTK AR+S +A P + R+S G +K R RPGT ALREIR++QKS DLLI ++ F R VR I + R+ A++ALQEAAE +LV LF D LCAIHA+RVT+M KD +LARR+ G+ Sbjct: 1 MARTKQTARKSTGAKA-------PRKQLASKAARKSAPATG---GIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAE--LRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGE 134
BLAST of EY661578 vs. ExPASy Swiss-Prot
Match: H31_TETPY (Histone H3 OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23 Identity = 68/146 (46.58%), Postives = 87/146 (59.59%), Query Frame = 2 Query: 56 MARTKHMARRSIRLQAAAVKATPPTSSPGTSRQRRSEAGEGTPTAQRKRQRLRPGTKALREIRRFQKSVDLLIPRMSFIREVRTITYRVAPPDVNRWTPEALIALQEAAEDFLVNLFGDAMLCAIHAKRVTLMKKDFELARRLGGK 493 MARTK AR+S +A P + R+S G +K R RPGT ALREIR++QKS DLLI ++ F R VR I + R+ A++ALQEAAE +LV LF D LCAIHA+RVT+M KD +LARR+ G+ Sbjct: 1 MARTKQTARKSTGAKA-------PRKQLASKAARKSAPATG---GIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAE--LRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGE 134
BLAST of EY661578 vs. ExPASy Swiss-Prot
Match: CENPA_SCHPO (Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe GN=cnp1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.218e-23 Identity = 61/112 (54.46%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 167 AGEGTPTAQRKRQRLRPGTKALREIRRFQKSVDLLIPRMSFIREVRTITYRVAP---PDVN-RWTPEALIALQEAAEDFLVNLFGDAMLCAIHAKRVTLMKKDFELARRLGG 490 A G P + +++R RPGT ALREIR++Q+S DLLI R+ F R VR I+ DV RW AL LQEAAE FLV+LF D LCAIHAKRVT+M++D +LARR+ G Sbjct: 8 AEPGDPIPRPRKKRYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARRIRG 119 The following BLAST results are available for this feature:
BLAST of EY661578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661578 ID=EY661578; Name=EY661578; organism=Citrus sinensis; type=EST; length=875bpback to top |