EY720101

Overview
NameEY720101
Unique NameEY720101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11152 contig Csv1_Contig11152:1..866. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY720101 vs. ExPASy Swiss-Prot
Match: STR16_ARATH (Thiosulfate sulfurtransferase OS=Arabidopsis thaliana GN=STR16 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24
Identity = 57/113 (50.44%), Postives = 73/113 (64.60%), Query Frame = 2 
Query:  332 TVDVRAAKNLLESGYGYLDVRTAEEFEEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVLGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 670
            +V V  A +LL +G+ YLDVRT EEF +GH   A   N+PYM     G  KNPDFL++V S   + D +++GCQSG RS+ AT DLL AGF  V +  GG+ AW +NGL  KA
Sbjct:   10 SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGA--INVPYMNRGASGMSKNPDFLEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 120
[Close]
BLAST of EY720101 vs. ExPASy Swiss-Prot
Match: DIN1_RAPSA (Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.982e-23
Identity = 51/112 (45.54%), Postives = 75/112 (66.96%), Query Frame = 2 
Query:  332 TVDVRAAKNLLESGYGYLDVRTAEEFEEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVLGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK 667
            +V VR A+ L ++GY +LDVRT +EF  GH   A   N+PYM+    G VKNP FL++V S  ++ D +++GC+SG RSL A+ +LL AGF  V++  GG++ W +N L V+
Sbjct:   73 SVPVRVARELAQAGYKHLDVRTPDEFSIGHPSRA--INVPYMYRVGSGMVKNPSFLRQVSSHFRKHDEIIIGCESGERSLMASTELLTAGFTGVTDIAGGYVPWTENELPVE 182
The following BLAST results are available for this feature:
BLAST of EY720101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
STR16_ARATH5.527e-2450.44Thiosulfate sulfurtransferase OS=Arabidopsis thali... [more]
DIN1_RAPSA7.982e-2345.54Senescence-associated protein DIN1 OS=Raphanus sat... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-A08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720101 ID=EY720101; Name=EY720101; organism=Citrus sinensis; type=EST; length=867bp
CACCCACGCGTCCGGAAGCATCCGAACAGCTGCAGCAGCAATCAGCGATC
GAGTTAGCGCCACAGCACACTTTTTTTCTAACTTCATCTGGTTTTCCCGG
CAAAACAAGCAACTGCTTTACTGCTGCGCCACCAGATCCCAACACTAAAT
AAGGCTCTATATATACAAGCCCATAAGTTCTTCTTCATGGATTCTACTGG
AAAAAGCCTTCAGGGATATTCAAATATAACTTTGTAAGTTTGATATGGGT
GTTTCCCGCAATTGGGTCACGTTTTTGCGTGGATTGTTTCTCCTCCTCCT
TATCTGTCGTAGCTCTGGAGCTGAAGTTATTACAGTTGATGTTCGAGCTG
CTAAGAATCTGCTTGAATCTGGCTACGGCTATCTTGATGTGAGGACGGCA
GAAGAATTCGAGGAAGGTCATGTGGATGCAGCAAAAATCTTCAACATTCC
TTACATGTTCAACACTCCAGAAGGTAGAGTAAAAAATCCAGATTTCTTGA
AGAAGGTTAGATCTCTTTGCAAGGAGGAGGATCGTCTTGTACTGGGCTGT
CAAAGCGGAGCTAGATCTCTTCATGCAACGGCTGATCTTCTTGGCGCTGG
CTTTAAGCATGTTAGCAACTTTGGAGGTGGGCATATGGCTTGGGTTCAGA
ACGGATTAAAGGTGAAGGCGCATGAAAAGCCAGCAGATCATCGATCTGAC
CTCTGATTAATCATGACTTGCCATTATTATCCACATGTATTACCCACACT
AGTAATGCCCAGAAAACCAACTTGTGGTGGCGCCGTCGTATTTATTAATT
TGTACAATATTTTAATTTTTTGTCCGTTTGTTGCAGAAAATGATGGGAAT
TTGATTAAATCATGCTA
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