EY661480

Overview
NameEY661480
Unique NameEY661480
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9985 contig Csv1_Contig9985:71..1013. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY661480 vs. ExPASy Swiss-Prot
Match: IST1L_DICDI (IST1-like protein OS=Dictyostelium discoideum GN=DDB_G0289029 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.535e-12
Identity = 49/192 (25.52%), Postives = 99/192 (51.56%), Query Frame = 2 
Query:  131 KCKSLIKLVKNRIDVIRRKRNATQKFLKKDIADLLSNGLDINAYGRADGLLAELNVSFCYDFVEQCCDFVYKSLSVMQRLSACPMDCREVVSSLMFAAARFSDLPELRDLRHIFYEKYGNSLEHFANM--------EFVEKLSSKPATMDKKI--QLMQDIASEYSIRW---DSPAFSQRMSKPSASVQDQP 667
            K K  +KL  +RI +++ K+    +  K+++A+LL    + +A  R + ++ +  +  C+  +E  C+ ++  ++++   +  P++ +E + +L++++ R   +PEL  +++    KYG  LE+ AN         + V KLS   AT D  I  Q + +IA ++++ W   D P   Q +      VQ QP
Sbjct:   12 KLKVQLKLAVSRIQILKNKKANIVRDEKRNVAELLRKKNEESARIRVETIIRDEYLIECFQIIEVLCELLHARINLINATTEMPLEMKESIFTLVYSSQRIQ-IPELEQIKNQLKAKYGKGLENEANCHCSTHVNPKIVHKLSY--ATPDPSIIFQTLSEIAEKFNVDWCGSDYPPPPQLIMPQPIIVQQQP 200
The following BLAST results are available for this feature:
BLAST of EY661480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IST1L_DICDI5.535e-1225.52IST1-like protein OS=Dictyostelium discoideum GN=D... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661480 ID=EY661480; Name=EY661480; organism=Citrus sinensis; type=EST; length=943bp
CCACGCGTCCGATCTGTTCGTTTTGAAATTTCTCTTTTAAATTTTGAAAA
CCGCAACGGTCACTATATCTGTTCGAGCTAAACCGAGGACGAAGATGCTG
GACGGATTGTTAGGTCGAGGTTTTGCCTCTAAGTGTAAGTCGTTGATAAA
ATTGGTAAAGAATCGGATCGATGTGATAAGAAGAAAGAGAAATGCTACTC
AGAAATTTCTGAAGAAAGATATTGCTGATCTGCTCTCTAATGGACTCGAC
ATTAATGCTTATGGCAGGGCCGACGGTCTACTAGCTGAGCTGAACGTTTC
GTTTTGTTATGATTTTGTTGAGCAATGCTGTGATTTTGTTTACAAGAGTC
TTTCAGTTATGCAGAGACTCAGTGCTTGCCCCATGGACTGCAGAGAGGTT
GTATCGTCCCTGATGTTTGCTGCTGCAAGATTTTCTGATCTGCCAGAGTT
GCGTGACCTTAGGCATATATTCTATGAGAAATACGGAAATTCCTTGGAAC
ACTTTGCGAATATGGAGTTTGTGGAGAAATTATCTTCCAAGCCAGCTACA
ATGGATAAAAAGATTCAGTTAATGCAAGATATTGCATCAGAGTATTCCAT
CAGATGGGACTCCCCAGCTTTTTCACAAAGGATGTCAAAACCCTCTGCAT
CTGTCCAGGACCAACCCTAGAGATGTGGTTATTTTAGTGTCTCTAATGAT
AAATACAAGTCAATCAATGCCCAAGACACCATACCNNAATGAGACNATCA
TGATGTTTCATATAAAGATAGGATTGATGGGCACAGATCACACATTGGTA
GAGAAGATAATGCCGCAGNTAGAATTGAGCCTAGCTTTCAGCCAGATTGG
CATCCNNTCAGCATGGATTTCAGCACTCAATGGCAGAGAAGAAAGCAGCC
CAAATGGATGATATTCCNTCAAGGAAAGCAGGCTCATTGGCAA
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