EY661450

Overview
NameEY661450
Unique NameEY661450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY661450 vs. ExPASy Swiss-Prot
Match: MENC_PASMU (o-succinylbenzoate synthase OS=Pasteurella multocida GN=menC PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.067e-13
Identity = 41/119 (34.45%), Postives = 71/119 (59.66%), Query Frame = 2 
Query:    2 ANRNWTYQEALEFGFLIKD---CDLQYIEEPVQNEEDIIKYCEESGLPVALDETID--KFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLS 343
            ANR+WT  +A  F   +K      +Q++EEP +   + +++ EE+G+ +A DET+   +FQ++P +       P + AIVIKP+++G  +    + + A  HG  AV+S++ ES LGL+
Sbjct:  171 ANRSWTPSKAQMFAKYVKPEHRARIQFLEEPCKTPAESLQFAEETGIAIAWDETVRDAEFQQNPPHFFT----PQVKAIVIKPTLVGSIQRCVELIKQAHAHGIQAVISSSIESSLGLT 285
The following BLAST results are available for this feature:
BLAST of EY661450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MENC_PASMU6.067e-1334.45o-succinylbenzoate synthase OS=Pasteurella multoci... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661450 ID=EY661450; Name=EY661450; organism=Citrus sinensis; type=EST; length=897bp
TGCCAATCGTAACTGGACCTATCAAGAAGCTCTTGAATTTGGTTTCTTAA
TTAAAGATTGTGACTTGCAATATATTGAGGAGCCTGTTCAGAATGAAGAG
GATATTATAAAGTACTGTGAAGAAAGCGGCTTGCCAGTAGCGTTGGATGA
AACCATTGACAAATTCCAAAAAGATCCTCTTAATATGCTTGAGAAGTATG
CTCACCCAGGAATAGTTGCTATTGTGATCAAACCAAGTGTCATTGGTGGA
TTTGAAAATGCAGGGTTAATTGCAAGATGGGCCCAGCGACATGGGAAGAT
GGCTGTTGTCAGTGCTGCCTTTGAAAGTGGTCTAGGTTTGTCAGCATATA
TCATATTTTCTAGCTATCTGGAGCTGCAGAATGCATATTTATGCAAAGTG
ATGAATCGTGAACTGTGCCCCCCTGTAGCCCAAGGTCTTGGAACTTATCA
GTGGCTTAAAGAAGACGTAACAACTGATCCTATCAGTATTTGTCATAATT
CGTGTAGGGGCTTTGTAGAAGCATCTGTTGCTAAAGCTACCCACATCCTG
CAGAACTTACAAATTAATAATGACGTTATATGTAAAACTTCCATGGAGGA
GCAAGTTTTGAGATACCAATTGAATGTGAATTCAAAGGATTTCTGCAGTT
TCATCAAAGTGCAAGAGATTGGACAAAGAATTGATATACAGGATAACATA
CTTCTGTTTCTCCATGGCTTTCTTGGAACTGGTGAAAGATGGATTNCCTA
TATGAANGNCGTCTCANGATCAGCAGATGCATCTCAATTGATCTCCCTGG
TCATGGGGGATCAANGATGCAAATCATGTTGCTAAAGCACACNAGAAATA
CTTTGTCATAGACGTCATTGCGACGTACTATATAGCTGATTGACNGA
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