EY661145

Overview
NameEY661145
Unique NameEY661145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY661145 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.674e-40
Identity = 95/169 (56.21%), Postives = 117/169 (69.23%), Query Frame = 3 
Query:   27 VSMAATAYAAVLTPRVPSTTTVKVKSSHCFALPCLXXXXXXXXXXXX-IKQVSKS--RRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 524
            +S+AA++  AV+ PRVP+ +T       C A+P L             +K VS +  ++  LL+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV             YTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:    3 ISVAASSSMAVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164
The following BLAST results are available for this feature:
BLAST of EY661145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH2.674e-4056.21Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-029-H12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661145 ID=EY661145; Name=EY661145; organism=Citrus sinensis; type=EST; length=774bp
CCACGCGTCCGAACCACAAATCAAAAGTATCAATGGCAGCGACGGCGTAC
GCGGCGGTGTTAACTCCACGTGTCCCCTCAACCACCACCGTCAAAGTCAA
ATCTTCTCACTGCTTTGCTCTTCCCTGCCTCCCTCCTCGTTCGTCAACGA
CACCATTCTCTTCTTCCATTAAACAAGTTTCAAAGTCGAGAAGGTTTCCT
TTGCTTCAGGTTAGAGCCTCTTCCTCAGAAGAGACATCCACAGTTGATGC
AGATGAACTTTTTTCAGACTTGAAGGAAAAGTGGGATGCCGTTGAAAACA
AGTCCACGGTACTTCTCTATGGAGGTGGGGCAATAGTGGCTGTTTGGTTA
TCCTCAACTATTGTTGGTGCCATCAATTCAGTGCCTTTGCTTCCCAAACT
CTTGGAGTTGATTGGACTTGGTTATACTGGATGGTTTGTCTACAGATACC
TTCTCTTCAAGTCAAGCAGAAAAGAACTAGCCACGGATATTGAAGCACTG
AAGAAGAAGATTGCTGGAACTGAATAGATTGTACATTCTGGAGGCAATTC
ATGTTTGTCCCTGATAGTCATTTATTTTGGTCCTCTATCATTGCATATGA
GGCACTTGTATCCTGTAGAGTAGGCTGCGTACGGATTCGATTTATCCCTG
TATTTTCCAGCATATCCCTGAGATAAGAGATTTGACAAAGTTATGTGTAT
GTCCAGGCATGATTGCTTCTGTGGNTTAGATCCAGAAGCAGATTCACTTC
TTCCAGCAAAAAAGAAAAAAGGGG
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