EY661124

Overview
NameEY661124
Unique NameEY661124
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661124 vs. ExPASy Swiss-Prot
Match: PX11D_ARATH (Peroxisomal membrane protein 11D OS=Arabidopsis thaliana GN=PEX11D PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.142e-58
Identity = 101/179 (56.42%), Postives = 127/179 (70.95%), Query Frame = 1
Query:  361 GLPKMLTSQPHLARKALRLYKWVDDLHALISPGPRGTPLPLV*LGESKNALLATILFLDQVVWLGRSGIYKNKERAELLGQISLFCWMGASVCSTLIELGELVTLSTSMKKLEKELMDSD*YINDNTYLYLKMQ**VS-STCSITHGHCAAVELIH*APRKYSSR-TGAFDFVLS-ISC 888
            G  + +     LARK  RL+K+V+DLH LISP P+GTPLPLV LG+SKNALL+T LFLDQ+VWLGRSGIYKNKERAELLG+ISLFCWMG+SVC+TL+E+GE+  LS+SMKK+EK L + + Y +++    LK     S +          A  L+  AP K + R TGAF F+ S ISC
Sbjct:   45 GTAQNVDKSTSLARKVFRLFKFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAELLGRISLFCWMGSSVCTTLVEVGEMGRLSSSMKKIEKGLKNGNKYQDEDYRAKLKKSNERSLALIKSAMDIVVAAGLLQLAPTKITPRVTGAFGFITSIISC 223          

HSP 2 Score: 68.9366 bits (167), Expect = 2.142e-58
Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 3
Query:  237 TLDATIAELALVVMYLNNAETIDNICLALQYGSKFLIDGQHWTAQNVDK 383
            TLD + AELALVVMYLN AE  D +C A+QYGSKFL  GQ  TAQNVDK
Sbjct:    4 TLDVSRAELALVVMYLNKAEARDKLCRAIQYGSKFLSGGQPGTAQNVDK 52          
BLAST of EY661124 vs. ExPASy Swiss-Prot
Match: PX11C_ARATH (Peroxisomal membrane protein 11C OS=Arabidopsis thaliana GN=PEX11C PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 8.071e-58
Identity = 101/180 (56.11%), Postives = 128/180 (71.11%), Query Frame = 1
Query:  361 GLPKMLTSQPHLARKALRLYKWVDDLHALISPGPRGTPLPLV*LGESKNALLATILFLDQVVWLGRSGIYKNKERAELLGQISLFCWMGASVCSTLIELGELVTLSTSMKKLEKELMDSD*YINDNTYLYLKMQ**VSSTCSITHGH--CAAVELIH*APRKYSSR-TGAFDFVLS-ISC 888
            G  + +     LARK  RL+K+V+DLHALISP P+GTPLPLV LG+SKNALL+T LFLDQ+VWLGR+GIYK+KERAE+LG+ISLFCWMG+SVC++L+E+GEL  LS S+KKLEKE+ + D + N+  Y     +    S   I  G     A  L+  AP+K + R TGAF F  S ISC
Sbjct:   44 GTAQNVDKNTSLARKVFRLFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAEILGRISLFCWMGSSVCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQ-YRAKVEKSNERSLALIKAGMDVVVAFGLLQLAPKKVTPRVTGAFGFASSLISC 222          

HSP 2 Score: 71.2478 bits (173), Expect = 8.071e-58
Identity = 36/51 (70.59%), Postives = 39/51 (76.47%), Query Frame = 3
Query:  231 MGTLDATIAELALVVMYLNNAETIDNICLALQYGSKFLIDGQHWTAQNVDK 383
            M TL+ T AEL LVV+YLN AE  D IC A+QYGSKFL DGQ  TAQNVDK
Sbjct:    1 MSTLETTRAELGLVVVYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDK 51          
BLAST of EY661124 vs. ExPASy Swiss-Prot
Match: PX11E_ARATH (Peroxisomal membrane protein 11E OS=Arabidopsis thaliana GN=PEX11E PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 6.738e-57
Identity = 102/185 (55.14%), Postives = 126/185 (68.11%), Query Frame = 1
Query:  361 GLPKMLTSQPHLARKALRLYKWVDDLHALISPGPRGTPLPLV*LGESKNALLATILFLDQVVWLGRSGIYKNKERAELLGQISLFCWMGASVCSTLIELGELVTLSTSMKKLEKEL-MDSD*Y------INDNTYLYLKMQ**VSSTCSITHGHCAAVELIH*APRKYSSR-TGAFDFVLS-ISC 888
            G  + +     LARK  RL+K+V+D H LISP P+GTPLPLV LG+SKNALL+T LFLDQ+VWLGRSGIYKNKER ELLG+ISLFCW+G+SVC++ +E+GEL  LS+SMKK+EKEL  D + Y       ND T   +K      S+  I      A+ L+  AP+  S R TGAF F  S ISC
Sbjct:   44 GTAQTVDKNTSLARKVFRLFKFVNDFHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERTELLGRISLFCWLGSSVCTSAVEIGELGRLSSSMKKMEKELKADDELYRAKLQKSNDRTLALIK------SSMDI----IVAIGLLQLAPKTISPRVTGAFGFTTSLISC 218          

HSP 2 Score: 68.1662 bits (165), Expect = 6.738e-57
Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 3
Query:  231 MGTLDATIAELALVVMYLNNAETIDNICLALQYGSKFLIDGQHWTAQNVDK 383
            M TLD T AELAL+V+YLN AE  D IC A+QYGSKFL  GQ  TAQ VDK
Sbjct:    1 MTTLDLTRAELALIVLYLNKAEARDKICRAIQYGSKFLSGGQPGTAQTVDK 51          
BLAST of EY661124 vs. ExPASy Swiss-Prot
Match: PX111_ORYSJ (Peroxisomal membrane protein 11-1 OS=Oryza sativa subsp. japonica GN=PEX11-1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.303e-54
Identity = 94/168 (55.95%), Postives = 116/168 (69.05%), Query Frame = 1
Query:  394 LARKALRLYKWVDDLHALISPGPRGTPLPLV*LGESKNALLATILFLDQVVWLGRSGIYKNKERAELLGQISLFCWMGASVCSTLIELGELVTLSTSMKKLEKELMDSD*YINDNTYLYLKM-Q**VSSTCSITHGHCAAVELIH*APRKYSSR-TGAFDFVLS-ISC 888
            LARK  RL KWV+DLH LISP  +GTPL LV LG+SKNALL+T LFLDQ VWLGR+GIYKNKER + + +ISL+CWM +SVC+ L+ELGEL  LS SM+KL +EL D+D Y ND     +K     + +          AV L+  +P+K + R TGAF FV S ISC
Sbjct:   55 LARKVFRLLKWVNDLHGLISPPAKGTPLTLVLLGKSKNALLSTFLFLDQFVWLGRTGIYKNKERTDRIVRISLYCWMASSVCAGLVELGELKRLSKSMRKLARELRDTDKYENDQYKSKMKQSDERLLALVKAAMDVVVAVGLLQLSPKKITPRVTGAFGFVTSLISC 222          

HSP 2 Score: 68.9366 bits (167), Expect = 2.303e-54
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 3
Query:  231 MGTLDATIAELALVVMYLNNAETIDNICLALQYGSKFLIDGQHWTAQNVDK 383
            M TLDAT AEL LVV+YLN AE  D IC A+QYGSKF+ +GQ  TAQ+VD+
Sbjct:    1 MSTLDATRAELGLVVLYLNKAEARDKICRAIQYGSKFISNGQPGTAQDVDR 51          
BLAST of EY661124 vs. ExPASy Swiss-Prot
Match: PX115_ORYSJ (Peroxisomal membrane protein 11-5 OS=Oryza sativa subsp. japonica GN=PEX11-5 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.055e-49
Identity = 85/167 (50.90%), Postives = 116/167 (69.46%), Query Frame = 1
Query:  394 LARKALRLYKWVDDLHALISPGPRGTPLPLV*LGESKNALLATILFLDQVVWLGRSGIYKNKERAELLGQISLFCWMGASVCSTLIELGELVTLSTSMKKLEKELMDSD*YINDNTYLYLKMQ**VSSTCSITHGH---CAAVELIH*APRKYSSR-TGAFDFVLSI 882
            LARK  RL+K+V+DLHALISP  +GTPLPL+ LG+SKNALL+T LFLDQ+VW GR+GIYKNKERAE L +I+ +C++G++ C+++IE+ EL  LS SMKKLEKEL   +  +  N    +K+Q       ++         A+ L+  AP+K + R TGAF F  S+
Sbjct:   55 LARKVFRLFKFVNDLHALISPPAKGTPLPLILLGKSKNALLSTFLFLDQIVWAGRTGIYKNKERAEFLSKIAFYCFLGSNTCTSIIEVAELQRLSKSMKKLEKELKHQE--LLKNEQYQMKLQKCNERRLALIKSSLDIVVAIGLLQLAPKKVTPRVTGAFGFASSL 219          

HSP 2 Score: 62.003 bits (149), Expect = 2.055e-49
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 3
Query:  231 MGTLDATIAELALVVMYLNNAETIDNICLALQYGSKFLIDGQHWTAQNVDK 383
            M +L++  A+LAL+++YLN AE  D IC A+QYGSKF+ +GQ   AQNVDK
Sbjct:    1 MSSLESARADLALLILYLNKAEARDKICRAIQYGSKFVSNGQPGPAQNVDK 51          
The following BLAST results are available for this feature:
BLAST of EY661124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PX11D_ARATH2.142e-5856.42Peroxisomal membrane protein 11D OS=Arabidopsis th... [more]
PX11C_ARATH8.071e-5856.11Peroxisomal membrane protein 11C OS=Arabidopsis th... [more]
PX11E_ARATH6.738e-5755.14Peroxisomal membrane protein 11E OS=Arabidopsis th... [more]
PX111_ORYSJ2.303e-5455.95Peroxisomal membrane protein 11-1 OS=Oryza sativa ... [more]
PX115_ORYSJ2.055e-4950.90Peroxisomal membrane protein 11-5 OS=Oryza sativa ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-029-F12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661124 ID=EY661124; Name=EY661124; organism=Citrus sinensis; type=EST; length=895bp
CCACGCGTCCGGGACCATACAGCCCTTATACAACTCTATCTTTTACGGAC
ATACAGAACTAAGCCGGTCATCCCAACCATTACGACTCTATATCTCGCAC
CGAATCTTATCTACTGGGCATCCTCTGCAACTTTTCTCACATATGATTTG
AGGAAATTTAAAAAAATATACGGCGAGTGTTATCTTTTCCACGTCGAATA
TCGTTGACACACTGTTTTTCGGATCAACTAATGGGTACACTGGATGCAAC
CATAGCAGAACTTGCTCTTGTGGTTATGTATTTGAATAATGCTGAAACCA
TAGACAATATTTGCCTAGCTTTACAATATGGTTCAAAATTCTTGATTGAT
GGACAGCACTGGACTGCCCAAAATGTTGACAAGTCAACCACACTTAGCCC
GGAAAGCTCTCCGTCTTTACAAGTGGGTCGATGATTTGCACGCTCTTATC
AGCCCAGGTCCCCGAGGAACTCCGCTTCCGCTTGTTTAGCTGGGAGAGTC
CAAGAATGCATTATTGGCAACTATCTTATTTCTTGATCAAGTCGTTTGGC
TTGGCAGATCAGGCATCTACAAGAACAAAGAGCGTGCGGAATTGCTTGGT
CAGATATCTCTCTTTTGTTGGATGGGTGCCTCAGTTTGTAGCACATTAAT
TGAGCTCGGAGAGCTTGTGACGCTTTCTACATCTATGAAAAAGTTAGAGA
AGGAGCTTATGGACAGTGACTAGTATATAAATGACAATACCTACCTCTAC
TTAAAAATGCAATGATAAGTATCTAGCACTTGCTCAATCACCCATGGACA
TTGTGCGGCCGTTGAGCTGATTCATTAGGCCCCCAGAAAGTACTCCTCGC
GAACAGGAGCCTTTGATTTCGTACTCTCCATCTCTTGTATCAGCT
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