EY661122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_ANEPH (Tubulin alpha-1 chain OS=Anemia phyllitidis GN=TUBA1 PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.886e-70 Identity = 127/144 (88.19%), Postives = 130/144 (90.28%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PPTVVPGGDLAKVQRAVCMISNST AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+S EG++G EY Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESGEGEEGDEGEEY 451
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA2_GOSHI (Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 9.360e-70 Identity = 125/138 (90.58%), Postives = 129/138 (93.48%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDG 419 R GKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINY PPTVVPGGDLAKVQRAVCMISNST AEVFSRIDHKFDLMYAKRAF+HWYVGEGMEEG FSE REDLAALE DYE V A+SAEGD+G Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFIHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGDEG 445
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA_PRUDU (Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.223e-69 Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDD 416 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PPTVVPGGDLAKVQRAVCMISNST AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+SAEG+D Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGED 444
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_GOSHI (Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.223e-69 Identity = 127/144 (88.19%), Postives = 128/144 (88.89%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQF DWCPTGFKCGINY PPTVVPGGDLAKVQRAVCMISNST AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A SAEGD+ EY Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFADWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSAEGDEEDEGDEY 451
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA4_GOSHI (Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 2.085e-69 Identity = 125/138 (90.58%), Postives = 127/138 (92.03%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDG 419 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PPTVVPGGDLAKVQRAVCMISNST AEVFSRIDHKFDLMY KRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+S EGD+G Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYTKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESGEGDEG 445
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_PEA (Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 2.085e-69 Identity = 128/145 (88.28%), Postives = 130/145 (89.66%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEG-DDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PPTVVPGGDLAKVQRAVCMISNST AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+S +G DDG EY Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESGDGDDDGLGEEEY 452
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA_CHLVU (Tubulin alpha chain OS=Chlorella vulgaris GN=TUBA PE=3 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 3.557e-69 Identity = 126/144 (87.50%), Postives = 128/144 (88.89%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PPTVVPGGDLAKVQRAVCMISNST AEVFSR+DHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+SAE D EY Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEADGEDEGEEY 451
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA3_HORVU (Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 PE=2 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 6.067e-69 Identity = 125/144 (86.81%), Postives = 128/144 (88.89%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISNST EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ EG+DG EY Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEFDEGEDGDEGDEY 451
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_MAIZE (Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 PE=3 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 6.067e-69 Identity = 125/144 (86.81%), Postives = 128/144 (88.89%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISNST EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ EG+DG EY Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEFDEGEDGDEGDEY 451
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA_WHEAT (Tubulin alpha chain OS=Triticum aestivum GN=TUBA PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.352e-68 Identity = 125/144 (86.81%), Postives = 127/144 (88.19%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PP VVPGGDLAKVQRAVCMISNST EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ EG+DG EY Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPGVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEFDEGEDGDEGDEY 451 The following BLAST results are available for this feature:
BLAST of EY661122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661122 ID=EY661122; Name=EY661122; organism=Citrus sinensis; type=EST; length=906bpback to top |